| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,576,194 | C→G | 10.6% | R300R (CGC→CGG) ‡ | glgX → | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,576,194 | 0 | C | G | 10.6% | 332.3 / 22.4 | 118 | R300R (CGC→CGG) ‡ | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base C (54/51); new base G (6/7); total (60/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
CCGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCGGCGAAAT > NC_002947/4576045‑4576343 | ccGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATgcgc < 2:390439/150‑1 (MQ=255)ccGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATgcgc > 1:3743170/1‑150 (MQ=255) cGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGcgcg < 2:174071/150‑1 (MQ=255) cGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGcgcg < 1:2515541/150‑1 (MQ=255) gCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCgg > 2:3242604/1‑150 (MQ=255) ccGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATc < 1:2275830/150‑1 (MQ=255) gcgcTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGa < 1:3957387/150‑1 (MQ=255) gcgcTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGa < 1:1917849/150‑1 (MQ=255) cTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACaa > 1:1589621/1‑150 (MQ=255) cTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCCGCGCATCGACag < 2:2105073/150‑2 (MQ=255) tACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAAc > 1:1859476/1‑150 (MQ=255) tACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAAc > 2:2813297/1‑150 (MQ=255) ccAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGt > 2:846527/1‑150 (MQ=255) cAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGAc < 1:3641947/139‑1 (MQ=255) cAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGAc > 2:3641947/1‑139 (MQ=255) gCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTAcc > 1:2904098/1‑150 (MQ=255) cAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCg > 2:802886/1‑150 (MQ=255) aaGATCGCCGAGTTCATGGAGTTGGTCGCGCACCGGCACGACGCGGGGCTTGCGGTGATCCTGGAGGTGGTCTACAACCACACCGCCTACGGCAACGCGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGc < 1:5115937/150‑1 (MQ=255) aGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGcc > 1:5377249/1‑150 (MQ=255) ccGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATc < 2:2717869/122‑1 (MQ=255) gTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGga > 2:1316119/1‑150 (MQ=255) gTTAAAGGAGATGGTCGCGCACCTGCACGACGCGGGGATTGTGGTGATCCTGGACGTGGTCTACAACCACACCGCCGACGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGga < 1:2578805/150‑1 (MQ=255) aaGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGTAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGgacgac > 1:3416505/1‑150 (MQ=255) aaGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGgacgac > 1:1722592/1‑150 (MQ=255) agaTGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAgc > 2:4244688/1‑150 (MQ=255) agaTGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAgc < 2:2752794/150‑1 (MQ=255) gTCGCGCACCTGAACGACGGGGGGTTTGAGGTGATCCTGGACGTGTTCTACAACAACACCGCCGAAGGAAACGAGCGCGGCCCTACCCTGTCGATGCGCGGCATCTACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGctac < 1:4759184/150‑1 (MQ=255) cgcgCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGctacta < 2:4973949/150‑1 (MQ=255) gcgcACCTGCACGACGCGGGGCTTGTGGTGATCCTGGACGTGTTCTACAACCACACCGCCGAAGGAAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCtactac < 2:2382652/150‑1 (MQ=255) gcgcACCGGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCtactac < 2:1448005/150‑1 (MQ=255) cACCTGCAGGACGGGGGGGTTGTGTTGAGCCTGTACGTGTTCTACAACCACACCGCGGATGGCAACGAGCGGGGCCCGACCCTGTCTATGCGGGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATc < 1:232167/150‑1 (MQ=255) cACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATc < 2:1476682/150‑1 (MQ=255) cTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAAc < 2:547518/150‑1 (MQ=255) tGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACg > 1:4995413/1‑150 (MQ=255) gCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGa > 2:49529/1‑150 (MQ=255) cACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACCAGCGCTACTACATCAACGAc > 1:2180718/1‑150 (MQ=255) cgccgcgGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCTAAGGCAACGTGCGCGGCCCGACCCTGTCTATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTc < 2:4800605/147‑1 (MQ=255) gcgGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACCCGCGCTACTACATCAACGACTccggc > 1:967703/1‑150 (MQ=255) gTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACAcc > 2:2065499/1‑150 (MQ=255) aTCCTGTACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGAAAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTg < 1:3153999/150‑1 (MQ=255) aTCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGctac < 2:3111460/117‑1 (MQ=255) aTCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGctac > 1:3111460/1‑117 (MQ=255) tCCTGGACGTGGTCTACAACCACACCGCCGACGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTgg < 1:4464391/150‑1 (MQ=255) ccTGGACGTGTTCTACAACCACACCGCCTAAGGAAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGa < 2:2904098/150‑1 (MQ=255) tGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGAcc < 2:3764520/150‑1 (MQ=255) ggACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCt > 2:2830561/1‑150 (MQ=255) ggACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCt > 2:2050289/1‑150 (MQ=255) tggTGGTCTACAACCACCCCGCCGATGGCAACGCGGGCGGCCCGACCGTGTCTAGGCGGGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGa < 1:3219979/148‑1 (MQ=255) aCGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCTACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGa < 2:2388669/150‑1 (MQ=255) cGTGTTCTACAACCCCACCGCCTATGGAAACGAGCGCGGCCCGACCCTGTGTATGCGCGGCATCGAAAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAg < 1:3383082/150‑1 (MQ=255) cGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAg > 2:1248773/1‑150 (MQ=255) ggTCTACAACCACACGGCCGAAGGAAAGGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCTTACTACCGCCTGATGCCGGACGACAAGCGCTACTACTTCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCa < 2:191271/150‑1 (MQ=255) cTACAACCACACCGCCGATGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAccc < 1:3515899/150‑1 (MQ=255) cTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAccc > 1:748587/1‑150 (MQ=255) cTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCGGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAccc < 2:1049094/150‑1 (MQ=255) atACAACCAAACCCCCTATGCAAACGCGCGCGCCCCGACCCTGTCGAGGCGCGCCAACCAAAACCCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAccc < 1:1597592/149‑1 (MQ=255) tACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAcccc > 2:2922547/1‑150 (MQ=255) tACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCAcccc > 2:1063894/1‑150 (MQ=255) ccACACCGCCTAAGGAAACGAGCGGGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACACGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGt < 1:3767395/150‑1 (MQ=255) ccACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACCAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGt > 2:4859745/1‑150 (MQ=255) cacaCCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGtg > 2:2586739/1‑150 (MQ=255) acacCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGCCAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGtgc < 1:2677927/150‑1 (MQ=255) acacCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCCGCGCATCGAc < 1:2601151/53‑1 (MQ=37) acacCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCCGCGCATCGAc > 2:2601151/1‑53 (MQ=37) acCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGtgctg < 2:4028837/150‑1 (MQ=255) gccgAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAg > 1:4419457/1‑150 (MQ=255) ccgAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGt < 2:3551627/150‑1 (MQ=255) taagcaaaCCAGCGCGGCCCCACCCTGTCGATGCGCGCAAACCAAAACGCCTCGTACTACCGCCTCATGCCGGACCACAAGCGCTACTACAACAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTg < 1:1165528/144‑1 (MQ=255) gacggCCACGCGCGCGGCCCGCCCCTGGCGAGGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTCCATCCACGACTCCGGCACCGGCAACACCCGGGACCTGAGCCACCCCTGCGTGCTGCAGTTg < 1:4054593/147‑1 (MQ=255) gAAGGCAACGCGCGCGGCCCGACCCTGTCGAGGCGGGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTg < 2:1589621/150‑1 (MQ=255) gAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTg < 1:4054461/150‑1 (MQ=255) cggCAACGCGGGCGGCCCGCCCCTGTCGATGCGCGGAATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGt < 1:2547685/149‑1 (MQ=255) ggCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACACGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTc > 1:5078474/1‑150 (MQ=255) cAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCAc > 1:2519875/1‑150 (MQ=255) aaCGTGCGCGGCCCGCCCCTGTGGAGGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCAcc < 1:4360872/150‑1 (MQ=255) aaCGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCAcc > 2:136706/1‑150 (MQ=255) gAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGAc > 2:916780/1‑150 (MQ=255) gAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGAc > 1:628625/1‑150 (MQ=255) attccgCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACtc > 2:4340313/6‑150 (MQ=255) cgGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACACGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACtcgct > 1:2070303/1‑150 (MQ=255) cccGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACtcgcttcg > 2:4463312/1‑150 (MQ=255) ccGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGAAGCCGGACGACAATCGCTACTACATCAACGACTCCGGCACCGGCAACACCCAGGACCTGAGCCACCCCTGCTTGCTGCAGTTGGTAACCGACtcgcttcgc > 1:2197075/1‑150 (MQ=255) cGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACtcgcttcgct > 1:756724/1‑150 (MQ=255) gACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACCAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTa > 2:5115696/1‑150 (MQ=255) gttGTCGATGCCGCGCATCGACAGCGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTg > 2:3562367/3‑150 (MQ=255) gttGTCGATGCCGCGCATCGACAGCGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGCCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTg > 1:1201447/3‑150 (MQ=255) ccTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTg > 2:2033669/1‑150 (MQ=255) ccTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTg < 2:5377249/150‑1 (MQ=255) ttGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTgg > 2:461978/2‑150 (MQ=255) ttGTCGATGCCGCGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGtg < 2:3892486/116‑1 (MQ=255) ttGTCGATGCCGCGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGtg > 1:3892486/2‑117 (MQ=255) ttGTCGATGCCGCGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTgg > 2:3647203/2‑150 (MQ=255) cTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTgg < 2:2266362/150‑1 (MQ=255) tCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGcc < 1:4463312/150‑1 (MQ=255) tCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGcc > 1:1618575/1‑150 (MQ=255) cGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTg < 2:2062835/122‑1 (MQ=255) gATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCgg > 1:2712066/1‑150 (MQ=255) ttGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTCCATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCGGc < 1:3621560/149‑1 (MQ=255) gcgcGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACACGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCGGCGa > 2:3836494/1‑150 (MQ=255) cgGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCGGCGAAAt < 2:3416505/150‑1 (MQ=255) | CCGCACCCGCGCTACCTGGCCAGCGGCAAGATCGCCGAGTTCAAGGAGATGGTCGCGCACCTGCACGACGCGGGGCTTGAGGTGATCCTGGACGTGGTCTACAACCACACCGCCGAAGGCAACGAGCGCGGCCCGACCCTGTCGATGCGCGGCATCGACAACGCCTCGTACTACCGCCTGATGCCGGACGACAAGCGCTACTACATCAACGACTCCGGCACCGGCAACACCCTGGACCTGAGCCACCCCTGCGTGCTGCAGTTGGTCACCGACTCGCTTCGCTACTGGGCCGGCGAAAT > NC_002947/4576045‑4576343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |