| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 280,200 | A→C | 6.3% | L17R (CTG→CGG) ‡ | sctS ← | sulfur compound ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 280,200 | 0 | A | C | 6.3% | 558.7 / 21.1 | 175 | L17R (CTG→CGG) ‡ | sctS | sulfur compound ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (77/86); new base C (4/7); total (82/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.44e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
GCGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCG > NC_002947/280051‑280349 | gcgTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTca < 2:703925/150‑1 (MQ=255)gcgTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTca < 1:3342105/150‑1 (MQ=255) cgTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTcag < 1:5108523/150‑1 (MQ=255) gTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTcagc < 2:4861130/150‑1 (MQ=255) cgcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGa < 2:3324487/150‑1 (MQ=255) gcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGaa < 1:210264/150‑1 (MQ=255) aagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgc < 1:3895866/150‑1 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg < 2:3142862/150‑1 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg > 2:2263417/1‑150 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg > 2:4079858/1‑150 (MQ=255) aCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 2:2851810/150‑1 (MQ=255) cGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGa < 2:2467476/150‑1 (MQ=255) cGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGa > 2:1970496/1‑150 (MQ=255) gACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAg > 1:124601/1‑150 (MQ=255) acacGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGt < 2:4592964/150‑1 (MQ=255) acGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCg > 2:3743803/1‑150 (MQ=255) cGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgggttata < 2:4933145/150‑7 (MQ=255) gTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGAc > 2:2562831/1‑150 (MQ=255) aGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTc > 1:4081190/1‑145 (MQ=255) aCCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACg > 1:5010563/1‑150 (MQ=255) cccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGa < 2:2365994/150‑1 (MQ=255) gcgcCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGtt < 2:3089867/150‑1 (MQ=255) ccagcctgTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 1:1994982/150‑1 (MQ=255) ccagcctgTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 1:2934337/150‑1 (MQ=255) ccagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCCGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 2:1849344/150‑1 (MQ=255) agccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAgg < 1:423155/150‑1 (MQ=255) agccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAgg < 1:4565767/150‑1 (MQ=255) gCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGa > 2:4280391/1‑150 (MQ=255) gCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCa > 2:1609076/1‑150 (MQ=255) aGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCAtt < 2:4359824/150‑1 (MQ=255) gAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCAttt < 2:4223399/150‑1 (MQ=255) aaTCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTg < 2:3221642/150‑1 (MQ=255) tCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt < 2:570099/150‑1 (MQ=255) cTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTg < 2:2867484/150‑1 (MQ=255) ttCGACAGCTGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGa > 2:2311543/1‑150 (MQ=255) ttCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCAttt > 2:4703235/1‑145 (MQ=255) tCGACAGCCGCATCAGCGCCAGGGCACAGCCCAGCACCAGACCGAAGAACATGCCGCCGACCCTGAGCAGCACCGTATAACCCGCGCCCTTCTGCCGGATGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGAc > 1:4988481/1‑150 (MQ=255) tCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGAc > 1:3553852/1‑150 (MQ=255) cAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg > 1:4000574/1‑104 (MQ=38) gCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGc > 2:4042394/1‑150 (MQ=255) tCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa < 2:2947941/150‑1 (MQ=255) tCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCGTCAGCCGGAAGGGCGCGGAGGCGACACCGCGGGGCAGGCTTTCAGCGAGCATGTGGTGACCGCGGCACCGac > 2:4171209/1‑149 (MQ=255) aGCGCCAGGGCAAAGCCCATCACCAGACAGAAGAACATGCCGCCGACACTGAGCAACACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGt < 2:4252177/150‑1 (MQ=255) aGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGt > 1:4496941/1‑150 (MQ=255) ccAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACtt > 1:4660909/1‑150 (MQ=255) cAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtc > 2:1489279/1‑150 (MQ=255) cAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtc > 1:1216301/1‑150 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgcgc > 1:4569639/1‑86 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtct < 2:127803/150‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtctct < 2:513546/150‑2 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg < 2:2073704/150‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg < 2:2809434/150‑1 (MQ=255) gCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCgg > 2:4784875/1‑150 (MQ=255) cAAAGCCCAGCACCAGACCAAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGa > 1:4161895/1‑150 (MQ=255) gCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGc > 1:2285272/1‑150 (MQ=255) cccAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCt > 1:2405292/1‑150 (MQ=255) cAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 1:2562831/150‑1 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAg < 1:2113983/131‑1 (MQ=255) aCCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa < 1:474621/127‑1 (MQ=255) ccAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt > 1:1337057/1‑111 (MQ=255) ccAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAg > 2:659174/1‑150 (MQ=255) gACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGt > 2:3285490/1‑150 (MQ=255) cGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGcc > 1:864982/1‑150 (MQ=255) gaagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt > 2:1895058/1‑104 (MQ=255) gaagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt < 1:1895058/104‑1 (MQ=255) tGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt > 1:2871645/1‑150 (MQ=255) ccgccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGa < 2:835810/150‑1 (MQ=255) acacTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGt > 2:5280012/1‑150 (MQ=255) acacTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGt < 2:4821041/150‑1 (MQ=255) cacTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTc < 2:589542/150‑1 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGAt > 1:4774989/1‑150 (MQ=255) gAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATg < 2:3976767/150‑1 (MQ=255) gAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATg < 2:1212528/150‑1 (MQ=255) agcagcACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGtt < 1:582280/58‑1 (MQ=255) agcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCt < 2:2405292/150‑1 (MQ=255) gcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCtt < 1:3232007/150‑1 (MQ=255) caCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttg > 1:485354/1‑150 (MQ=255) caCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttg > 1:29020/1‑150 (MQ=255) aCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgt > 2:5058151/1‑150 (MQ=255) ccGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 2:4138688/109‑1 (MQ=255) cGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgttg > 1:5308109/1‑150 (MQ=255) cGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgttg > 1:3019534/1‑150 (MQ=255) tcgactccGCGCCCTTCCTGCTGAAGGGCGCGGAGTCGACAACCAGTTGCACGCTTTAAGCGATAAATTGGTGACATCGGCACCGAAGTACATCTCGGACAGCTTGGCCAGCGTGCCATAAGCTTTTAGCTTGTCGATGGCCATGTTTAt > 1:339993/7‑150 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATgg < 1:4079858/150‑1 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATgg > 2:2840588/1‑150 (MQ=255) gactccGCGCCCTTCCTGCTGAAGGGCGCGGGGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGcc < 1:3141874/111‑1 (MQ=38) aaCCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGc > 1:4398754/1‑150 (MQ=255) aaCCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGc < 2:2407873/150‑1 (MQ=255) tccGCGCCCTTCCTGCTGAAGGGCGCGGGGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTg > 2:2894526/2‑150 (MQ=255) cccGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTg > 1:730417/1‑150 (MQ=255) cgcgCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGcc > 1:3079851/1‑150 (MQ=255) cgcgCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGcc > 2:4268203/1‑150 (MQ=255) cgcgCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGcc < 2:1341742/150‑1 (MQ=255) cccgacagcagGAAGGGCGCGGAGTCGACACCGAGTTGCAGGCTTTCAGCGCTCATTTGGCGACATCGGCACCGAAGTACTTCTCGGACACCGTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGATGATGGCTGCCAACa < 2:5433514/145‑1 (MQ=255) cccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACa < 1:1609076/150‑1 (MQ=255) ccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAg > 2:86914/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:377229/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:2485499/1‑150 (MQ=255) tCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTc < 1:3743803/150‑1 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCg > 1:1713318/1‑150 (MQ=255) | GCGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCG > NC_002947/280051‑280349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |