| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 280,203 | A→C | 6.6% | L16R (CTG→CGG) ‡ | sctS ← | sulfur compound ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 280,203 | 0 | A | C | 6.6% | 541.4 / 16.9 | 175 | L16R (CTG→CGG) ‡ | sctS | sulfur compound ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (76/84); new base C (6/7); total (82/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 181 total aligned reads displayed.
CGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCGGCT > NC_002947/280057‑280352 | cgcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGACCAACCTGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGa < 2:2062574/150‑1 (MQ=255)cgcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGa < 2:3324487/150‑1 (MQ=255)cgcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGa > 1:338699/1‑150 (MQ=255) gcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGaa < 1:863026/150‑1 (MQ=255) gcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGaa < 1:210264/150‑1 (MQ=255) aagaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgc < 1:3895866/150‑1 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg < 2:3142862/150‑1 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg > 2:2263417/1‑150 (MQ=255) aCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 2:5209315/150‑1 (MQ=255) aCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 1:3029096/150‑1 (MQ=255) cGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGa < 2:2467476/150‑1 (MQ=255) gACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAg > 1:124601/1‑150 (MQ=255) acacGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGt < 2:4592964/150‑1 (MQ=255) acGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCg > 2:3743803/1‑150 (MQ=255) cgatcccccGCGCCAGCCTTTTCAGCGGCATAATCTTCGACAGCCGCATCAGCGCCAGGGCAACGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATACCCCGCGCCCTTCAGCTGGATGGGCGCGGAGTCGa < 1:2521549/144‑1 (MQ=255) cGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGa < 2:4145082/150‑1 (MQ=255) cGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGAAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCTGGATGGGCGCGGAGTCGa < 1:2564886/150‑1 (MQ=255) gTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGAc > 2:2562831/1‑150 (MQ=255) aGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTc < 2:4081190/145‑1 (MQ=255) aCCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACg > 1:5010563/1‑150 (MQ=255) cccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGa < 2:2365994/150‑1 (MQ=255) ccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAg > 2:147463/1‑150 (MQ=255) ccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAg > 1:629519/1‑150 (MQ=255) gcgcCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGtt < 2:3089867/150‑1 (MQ=255) ccagcctgTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 1:2934337/150‑1 (MQ=255) ccagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCCGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 2:1849344/150‑1 (MQ=255) ccagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 2:603042/150‑1 (MQ=255) cagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAg > 1:5195823/1‑150 (MQ=255) agccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAgg < 1:423155/150‑1 (MQ=255) agccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAgg < 1:4565767/150‑1 (MQ=255) ttCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCa < 2:5010563/150‑1 (MQ=255) aGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCg > 1:5328527/1‑150 (MQ=255) gCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGa > 2:4280391/1‑150 (MQ=255) gCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCa > 2:1609076/1‑150 (MQ=255) aGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCAtt < 2:4359824/150‑1 (MQ=255) aaTCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTg < 2:3221642/150‑1 (MQ=255) tCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt < 2:570099/150‑1 (MQ=255) cTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTg < 2:2867484/150‑1 (MQ=255) ttCGACAGCTGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGa > 2:2311543/1‑150 (MQ=255) tCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGAc > 1:4988475/1‑150 (MQ=255) cAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg > 1:4000574/1‑104 (MQ=38) cAGCCGCATCAGCCCCAGGCCAAAGCCCAGCACCACACCGAACAACATCCCGCCGACACTGAGCAGCACCGTAAAACCCGCGCCATACAGCAGCAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCg < 1:3668097/150‑1 (MQ=255) gCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGc > 2:4042394/1‑150 (MQ=255) tCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa < 2:2947941/150‑1 (MQ=255) tCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCGTCAGCCGGAAGGGCGCGGAGGCGACACCGCGGGGCAGGCTTTCAGCGAGCATGTGGTGACCGCGGCACCGac > 2:4171209/1‑149 (MQ=255) aGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGt > 1:4496941/1‑150 (MQ=255) aGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAACACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGt < 2:4252187/150‑1 (MQ=255) gcgcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTa < 2:5328527/150‑1 (MQ=255) ccAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACtt > 1:4660909/1‑150 (MQ=255) cAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtc > 1:1216301/1‑150 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgcgc > 1:4569639/1‑86 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtct < 2:2854865/150‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg < 2:4660909/150‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg < 2:4867380/150‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCg < 2:2809434/150‑1 (MQ=255) cAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGa < 1:3444798/150‑1 (MQ=255) cAAAGCCCAGCACCAGACCAAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGa > 1:4161895/1‑150 (MQ=255) gCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGc > 1:2285272/1‑150 (MQ=255) cccAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCt > 1:2405292/1‑150 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAg > 2:2113983/1‑131 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAg < 1:2113983/131‑1 (MQ=255) cACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGcc < 2:5130074/150‑1 (MQ=255) aCCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa > 2:474621/1‑127 (MQ=255) aCCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGaa < 1:474621/127‑1 (MQ=255) ccAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt < 2:1337057/111‑1 (MQ=255) ccAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt > 1:1337057/1‑111 (MQ=255) cAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGc < 2:1239343/150‑1 (MQ=255) gACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGt > 2:3285490/1‑150 (MQ=255) cGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGcc > 1:864982/1‑150 (MQ=255) gaagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt > 2:1895058/1‑104 (MQ=255) gaagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt < 1:1895058/104‑1 (MQ=255) caaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCa < 1:3120858/149‑1 (MQ=255) tGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCttt > 2:157293/1‑150 (MQ=255) ccgccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGa < 2:835810/150‑1 (MQ=255) acacTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGt < 2:4820984/150‑1 (MQ=255) tGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGAt > 1:4774989/1‑150 (MQ=255) gAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATg < 2:3976767/150‑1 (MQ=255) agcagcACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGtt > 2:582280/1‑58 (MQ=255) cagcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGcc > 1:3196911/1‑150 (MQ=255) agcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCt < 2:2405292/150‑1 (MQ=255) caCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttg > 1:485354/1‑150 (MQ=255) caCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttg > 1:29020/1‑150 (MQ=255) aCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgt > 2:5058151/1‑150 (MQ=255) ccGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg > 1:4138688/1‑109 (MQ=255) cGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgttg > 2:2429827/1‑150 (MQ=255) cGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCttgttg > 1:3019534/1‑150 (MQ=255) ataACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATg > 1:1910224/1‑150 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATgg > 2:2840588/1‑150 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATgg < 1:4079858/150‑1 (MQ=255) aaCCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGc > 1:4398754/1‑150 (MQ=255) tccGCGCCCTTCCTGCTGAAGGGCGCGGGGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTg > 2:2894526/2‑150 (MQ=255) ccGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGc > 2:690618/1‑150 (MQ=255) cccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACa < 1:1609076/150‑1 (MQ=255) ccTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAg > 2:86914/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:4239042/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:418165/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:377229/1‑150 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGtt > 2:2485499/1‑150 (MQ=255) tCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTc < 1:3743803/150‑1 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCg > 1:1713318/1‑150 (MQ=255) | CGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCGGCT > NC_002947/280057‑280352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |