| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,723,602 | G→T | 6.3% | intergenic (‑39/+25) | PP_4178 ← / ← htpG | dienelactone hydrolase family protein/chaperone protein HtpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,723,602 | 0 | G | T | 6.3% | 626.6 / 22.9 | 189 | intergenic (‑39/+25) | PP_4178/htpG | dienelactone hydrolase family protein/chaperone protein HtpG |
| Reads supporting (aligned to +/- strand): ref base G (91/86); new base T (5/7); total (96/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
GCCATCACCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAA > NC_002947/4723454‑4723747 | cACCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCgg < 2:97407/150‑1 (MQ=255) ccAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGc > 1:709926/1‑150 (MQ=255) cAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCTTCA‑TAAAAAAGCCCGCCGAAGCGGGCt > 2:2675790/1‑150 (MQ=255) aGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAGAAAGCCCGCCGAAGCGGGCtt > 2:4736251/1‑150 (MQ=255) aGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCtt < 1:5134845/150‑1 (MQ=255) gCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCTTCGGCGGGCttt < 1:305891/150‑1 (MQ=255) gCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCTTCGGCGGGCttt < 1:2701262/150‑1 (MQ=255) cccTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTg < 2:2195468/150‑1 (MQ=255) cTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCt < 2:3354456/150‑1 (MQ=255) tGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCTTCGGCGGGCtttttta < 1:3593715/150‑5 (MQ=255) tGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCtg > 2:5432742/1‑150 (MQ=255) tGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCtg > 2:1464819/1‑150 (MQ=255) gcggcCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGc < 1:195301/150‑1 (MQ=255) cggcCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCa < 2:53206/150‑1 (MQ=255) ccAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCaa < 1:5252744/150‑1 (MQ=255) cAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAAc > 1:1037175/1‑150 (MQ=255) aCCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGc < 2:5290363/150‑1 (MQ=255) cccGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCa < 1:5187387/150‑1 (MQ=255) cccGGCTCATAGACCAAACGGCTTTAGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCATTAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGc < 2:2308959/150‑1 (MQ=255) ccGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAg > 1:1575322/1‑150 (MQ=255) ccGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAg > 2:2086163/1‑150 (MQ=255) gCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGTATCAACTCAAGCAGACa < 2:3024538/150‑1 (MQ=255) gCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACa < 1:2086163/150‑1 (MQ=255) aTAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTc < 1:1464701/150‑1 (MQ=255) aTAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTc < 1:298662/150‑1 (MQ=255) aCCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTTGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGAcc > 2:1057418/1‑150 (MQ=255) aaaCGGCTTTCGAAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGt > 1:4913092/1‑150 (MQ=255) caCGGCTTTCGTAGGTCGTGCCAGACAGGTGATACACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCATTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTa < 2:3062562/149‑1 (MQ=255) aaCGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTa > 2:5384103/1‑150 (MQ=255) aaCGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTa > 1:2274602/1‑150 (MQ=255) cTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTg < 2:2408699/150‑1 (MQ=255) tttCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAg > 2:51702/1‑126 (MQ=255) tttCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAg < 1:51702/126‑1 (MQ=255) tttCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGt > 1:1839614/1‑150 (MQ=255) tttCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGt > 2:1366586/1‑150 (MQ=255) gttCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGt > 1:127234/2‑150 (MQ=255) tCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCCTCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTc > 1:4397678/1‑150 (MQ=255) cGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCa < 1:4052306/150‑1 (MQ=255) tAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAgg > 1:2898107/1‑150 (MQ=255) aGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGTACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGc < 2:388172/150‑1 (MQ=255) aGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGc > 2:255132/1‑150 (MQ=255) aGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGc > 2:4482021/1‑150 (MQ=255) ggTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCTTCGGCGGGCtt < 2:1739947/100‑1 (MQ=255) ggTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCTTCGGCGGGCtt > 1:1739947/1‑100 (MQ=255) ggTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcg > 2:4200192/1‑150 (MQ=255) ggTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcg > 2:75124/1‑150 (MQ=255) gTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcga > 1:3670756/1‑150 (MQ=255) gTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcga < 1:2025373/150‑1 (MQ=255) cTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcgacg > 1:2637584/1‑150 (MQ=255) ttGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGcgacga > 2:4174371/1‑150 (MQ=255) gACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTaa < 1:1390335/150‑1 (MQ=255) gACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTaa < 2:2018434/150‑1 (MQ=255) gATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGccgccg > 1:4744040/1‑150 (MQ=255) aTAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCgg > 1:1629019/1‑150 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTc < 1:4338676/106‑1 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCt > 1:2564969/1‑150 (MQ=255) ccAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCt > 2:2036390/1‑150 (MQ=255) cAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCtt > 2:2946465/1‑150 (MQ=255) cAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCtt > 2:1564615/1‑150 (MQ=255) gCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCa < 2:5232229/150‑1 (MQ=255) ttCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCt < 2:2679475/150‑1 (MQ=255) gacgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTc < 1:966209/96‑1 (MQ=255) gacgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGt > 2:664093/1‑103 (MQ=255) gacgaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGt < 1:664093/103‑1 (MQ=255) gaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCaa < 1:4195847/82‑1 (MQ=255) gaTTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCAcc < 2:127202/150‑1 (MQ=255) tttGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCaa > 1:4572941/1‑76 (MQ=255) tttGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCaa < 2:4572941/76‑1 (MQ=255) tttGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgccgc > 1:2096736/1‑150 (MQ=255) tttGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGgccgc > 1:947560/1‑150 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCA‑TAAAATAGCCCGCCGAAGCGGGCTTTGCTGTGCATCATCTCAAGCAGTCAGCTCGACCAGTAGCTTGTTCAGTCGACGTACGTAAGCCGCCGGGTCCTTCAGGCTGTCAGCGGCCGCCAggg > 2:4986784/1‑150 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAggg > 2:4424330/1‑150 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAggg > 2:4655872/1‑150 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAggg > 1:2635570/1‑150 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAggc < 1:2836450/150‑2 (MQ=255) tcatcaAGCACTCCTTTGGCACTCGACA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGATGTGCAACAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCATTCAGGCTGTCACCGGCCGCCAggg > 2:702378/1‑150 (MQ=255) aGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCt < 1:744427/150‑1 (MQ=255) aGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCt > 2:4301337/1‑150 (MQ=255) aGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCt > 2:1508896/1‑150 (MQ=255) gCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTg > 2:4818653/1‑150 (MQ=255) cTCCGTGGGCACTCGTCA‑TAACAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCTGACAGCTCGCCCAGTAGCTTGTTCAGGCGACGACCGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATc < 2:3729014/150‑1 (MQ=255) cTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGaa > 2:168611/1‑150 (MQ=255) ttGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACa < 2:4234644/150‑1 (MQ=255) cACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAt < 1:1508896/150‑1 (MQ=255) cACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAt > 2:4773091/1‑150 (MQ=255) cACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAt < 1:3884304/150‑1 (MQ=255) tCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAtgtg < 1:5384103/150‑1 (MQ=255) tCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAtgtg < 1:1751256/150‑1 (MQ=255) tCGTCA‑CAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTTTTCAGGCGCCGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGAtgtg < 1:769426/150‑1 (MQ=255) cGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGc < 2:4909242/150‑1 (MQ=255) cGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGc < 2:2813706/150‑1 (MQ=255) agcaaaGCCCGCTTCGGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGc > 2:2102747/4‑150 (MQ=255) aaaaaaGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGc > 2:598586/1‑150 (MQ=255) aaaGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCg < 1:3781435/150‑1 (MQ=255) gCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCg > 1:290607/1‑150 (MQ=255) gCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCg > 1:1203845/1‑150 (MQ=255) cccGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCgg > 1:1440499/1‑85 (MQ=255) cccGCCGAAGCGGGCGGTGCTGTGCATCAACTCAAGCAGACCGCTCGACCCGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACGGGATGTGCGACAGCTCGGCGa > 2:4469531/1‑150 (MQ=255) cgccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGaaa < 1:2675839/150‑1 (MQ=255) cgccgAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGaaa < 1:2675790/150‑1 (MQ=255) | GCCATCACCAGCCCTGGGCGGCCCAGCGCACCCGGCTCATAGACCAAACGGCTTTCGTAGGTCTTGCCAGACAGGTGATAAACCAGCGATTCGACGATTACTTTGCTCATCAAGCACTCCTTTGGCACTCGTCA‑TAAAAAAGCCCGCCGAAGCGGGCTTTGCTGTGCATCAACTCAAGCAGACAGCTCGACCAGTAGCTTGTTCAGGCGACGAACGTAAGCCGCCGGGTCCTTCAGGCTGTCACCGGCCGCCAGGGCCGCCTGATCGAACAGGATGTGCGACAGCTCGGCGAAA > NC_002947/4723454‑4723747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |