| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,742,809 | T→A | 23.5% | intergenic (+78/+674) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,742,809 | 0 | T | A | 23.5% | 186.2 / 60.6 | 117 | intergenic (+78/+674) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (45/37); new base A (13/14); total (59/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCAC > NC_002947/4742662‑4742955 | cGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGc < 1:2598180/150‑1 (MQ=255) ccGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCcg < 2:5155174/150‑1 (MQ=255) ccGCGCTAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTATTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:1258577/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:2030629/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:1420550/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 1:5054666/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 2:4472827/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 1:1598697/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 1:3619327/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:4202198/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:1053479/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:351978/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 1:854741/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:4038966/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:1053218/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:4250791/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 1:2544480/150‑1 (MQ=255) gcgcCAGCGGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:5317469/150‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGCAGCGCGACATCGTTGCCCTGACAGACCGCAAGTAAGCTGCAGTAGCCGAACGCACGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGGTCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 2:834122/150‑1 (MQ=38) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 1:5012289/150‑1 (MQ=255) ccAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGc < 1:5060325/150‑1 (MQ=255) cTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCGCGTCGCCGCCCTGCCCGCCCAGACGCCGGc > 1:654862/1‑150 (MQ=255) gTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCGTGCCCGCGCAGCGGCCGGcac > 2:2303458/1‑150 (MQ=255) tACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGcaca > 2:3144833/1‑150 (MQ=255) acacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCGCTTCGCGGCCGTGCCCGCCCAGAGGCCCGcacac > 1:673293/1‑149 (MQ=255) acacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCGCTTCGCGGCCGGGCCCCCGCACAGGCCCGcacac > 1:2016714/1‑149 (MQ=255) cacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGGCTCTTAGCGGCCGTGCCCGCGAAGATGCCGGCACAGa > 1:3428697/1‑150 (MQ=255) aGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCATCGCGGCCGTGCCCGCGAAGAGGCCGGCACAGACACCACAAAAc > 1:3593476/1‑150 (MQ=255) gcgcGACATCGTTGCCCTGAAAGACCGCAATTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCa < 2:1783646/150‑1 (MQ=255) cgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGtt > 1:4951349/1‑150 (MQ=255) taCATCGTGGCCCTGAAAGACCGCACGTATGCTGCTGTAGCCTAAGGCAAGAAGGGTGCCCTCGGGCAGCCTTTTTTCTTTG‑CCGGTGGCGGGCCTCTTGGCGGCCTGGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGttt < 2:3747272/149‑1 (MQ=255) cATGGTTGCCCTTAAAGACCGAAATTAAGCTGCAGTAGCCGACCGCAACATGGCGGCCCTCGGGCAGCATTTTTTTTTTGGCTTGT‑GCCGGCATCTTCGGGGCCTTGCCCGCTATGAGGCCGGCACAGACACCACAAAACCTCAGttttt < 1:3993607/150‑1 (MQ=255) ccTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGa < 2:1507552/105‑1 (MQ=255) ccTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGa > 1:1507552/1‑105 (MQ=255) tGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCACTTCGCGGCCATGCCCGCGAAGAGGCCCGCACAGACACCACAAAAACGCAGTTTTTATccgcccgcg > 2:489564/1‑149 (MQ=255) ccGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGaa > 1:4515749/1‑111 (MQ=255) ccGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGaa < 2:4515749/112‑2 (MQ=255) cGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGc < 2:4485774/150‑1 (MQ=255) cGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACACACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGc > 2:2006948/1‑150 (MQ=255) gCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGcc > 2:5447417/1‑150 (MQ=255) cAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGccc > 2:4841097/1‑150 (MQ=255) aGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACCGACACCACAAAACCGCAGTTTTTCTCCGCCCGCGCACGCAGcccgg > 2:2468809/1‑148 (MQ=255) cgCTGCAGTAGCCGACCGCAAGACGGCGGCCCGCGGGCAGCCTTTTTTATTTGTCCTGG‑GCCGGCCTCTTCGCGGCCTTGCCCGCGACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAg < 2:837721/149‑1 (MQ=255) aGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:4535488/84‑1 (MQ=25) aGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGGCAAGGCCGCGAaga > 2:4535488/1‑84 (MQ=25) gCCGACCGCAAGCAGGCTGCCCTCGGGCTGCCTTTTTTATTTGTCCTGG‑GCCGGCCTCGTGGGGGCCTGGCCCGCGACGAGGCCGGCACAGACACCACAACACCTCCGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAAc < 2:2723176/150‑1 (MQ=255) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga > 1:1143734/1‑79 (MQ=255) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:1143734/79‑1 (MQ=255) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACg < 2:4951349/150‑1 (MQ=255) gaccGCAAGATGGCTGCCCTCGGGCAGCCTTTTTTATTTGGCCTGG‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:673293/147‑1 (MQ=255) aaCGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGGGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCACCCCGTTCAGGGTATTGAACGgcg > 2:3468403/1‑150 (MQ=255) aagGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCACGGACACCACAAAACCTCAGTTTTTATCCGCCCGCTCACGCAGCCCGTTCAGGGTATTGAAAGGCGCATccacc > 2:593221/1‑150 (MQ=255) ggCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCcaccac > 2:4519881/1‑150 (MQ=255) cccTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACt > 2:2417792/1‑150 (MQ=255) ccTCGGCCAGCCTTTTTTTTTTGTCCTGT‑GCCGGCCTCTTGGCGGCCTTGCCCGCTAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACtt < 2:2016714/150‑1 (MQ=255) gggggCTGCTTTTTTTTTTTGCCGTGG‑GCCGGCCCCTTCGGGGCCGTCCCCGCTACGCGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGACCttgt < 1:323146/148‑1 (MQ=255) cGGGCAGCCTTTTTTATGTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgtt < 2:3096777/150‑1 (MQ=255) ccTTTGTTATTTGTCCTGT‑GCCGGCCGCGTCGCCGCCATGCCCCCGCCGAGGCCGGCACAGACACCACAAAACCACAGTTTTTAGCCCCCCCCGCACGCAGCCCGGTCACGGGAGTGAACCGCCCATCCACCACCAACGTGTTGGccccc > 2:4108139/1‑150 (MQ=255) ttttttATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGGCGGCACAGGCACCACAAAAACTCAGTTTTTCTGCGCCCGCTCACGCAGCCCGGTGCGGGTATTGAACGGCGCATCCACCACGCACTTGTTGGccaccag > 2:38715/1‑149 (MQ=255) ttttttATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCGTTCAGGGTATTGAACGGCGCATCCACCACGAACATGTTGGCCACCAt > 2:1293414/1‑150 (MQ=255) ttttGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCgg < 2:4852608/149‑1 (MQ=255) ttttGTCCTGG‑GCCGGCCTCTTCGGGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCgg < 2:1574969/149‑1 (MQ=255) ttGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGATGCCGGCACATACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCCCGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCa > 2:454765/1‑150 (MQ=255) cTGT‑GCCGGCCTCTTCGCGGCCTGGCCCGCTAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTa < 2:2099743/150‑1 (MQ=255) gggCCGGCCTCTTCGCGGCCTGGCCCGCGATGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCCTCGCCGGCACGCTacc < 1:4926020/148‑1 (MQ=255) ggCCGGCCTCTGCGGGGCCTGGCCCGGGACGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTacca < 2:3898998/149‑1 (MQ=255) ccGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTaccacc > 2:1181282/1‑150 (MQ=255) ccGGCCTCTTCGCGGCCCTGCCCCCGAAGAGGCCGGCACATACACCACAAAACCGCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCCCCAACGCCGGCACGCTaccacc > 2:1570345/1‑150 (MQ=255) cGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCt > 2:810861/1‑150 (MQ=255) ggCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTg > 2:2312211/1‑150 (MQ=255) ctctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 1:2654446/1‑150 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCAGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 2:5371123/1‑150 (MQ=255) tctTCGCGGGCACGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAggg < 1:4646473/86‑1 (MQ=37) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGGCACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4617868/1‑150 (MQ=39) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGGCACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4617843/1‑150 (MQ=39) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg > 2:2885708/1‑85 (MQ=37) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg < 1:2885708/85‑1 (MQ=37) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc > 2:940440/1‑97 (MQ=37) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4315988/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:4766586/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCgg < 2:934705/132‑1 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCgg > 1:934705/1‑132 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:166328/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:2374533/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:4574965/1‑150 (MQ=255) ctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg < 2:210907/150‑1 (MQ=255) ctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 1:4859225/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:3266741/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:4319323/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:1721814/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:4963477/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:717323/1‑150 (MQ=255) tCGCGGCCTTGCCCGCGAATAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:1266174/150‑1 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACACAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:3144833/150‑1 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 2:3016651/150‑1 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 2:4371047/150‑1 (MQ=255) gcgcgGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 2:2366706/149‑1 (MQ=255) gcgGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtgt > 2:3857858/1‑150 (MQ=255) ggCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGc > 1:689971/1‑150 (MQ=255) ccTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGATTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCAc < 2:3525443/150‑1 (MQ=255) | CGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGT‑GCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCAC > NC_002947/4742662‑4742955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |