| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,770,948 | G→C | 5.7% | A3429G (GCC→GGC) | pvdD ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,770,948 | 0 | G | C | 5.7% | 587.7 / 18.6 | 176 | A3429G (GCC→GGC) | pvdD | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base G (65/101); new base C (4/6); total (69/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGT > NC_002947/4770799‑4771097 | ccGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAggg > 2:4847509/1‑150 (MQ=255) cgcTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCt < 1:2277197/150‑1 (MQ=255) cgcTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCt < 1:2277298/150‑1 (MQ=255) gcggcCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCa < 2:1125232/150‑1 (MQ=255) ccccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCt < 1:644044/150‑1 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg > 2:4243091/1‑150 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg > 1:1156432/1‑150 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg < 2:2163011/150‑1 (MQ=255) ccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTgc < 1:3613040/150‑1 (MQ=255) gAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTgcgc > 1:3923639/1‑150 (MQ=255) aaaGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGcgcg > 1:509333/1‑150 (MQ=255) taaTGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:3997675/148‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCGGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgc > 1:2982587/1‑147 (MQ=37) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa > 1:83915/1‑150 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:3022490/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:3022389/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa > 2:4894267/1‑150 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:1192248/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa > 1:2307902/1‑150 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:2201522/150‑1 (MQ=255) cATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCGGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgct < 2:2982587/150‑5 (MQ=37) cATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCGGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgct < 2:3109042/150‑5 (MQ=37) cATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCACATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgct < 1:2535848/150‑5 (MQ=37) aTGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAgg < 2:1294926/150‑1 (MQ=255) aaaGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCtt < 1:1049188/150‑1 (MQ=255) ttCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTcgcg > 1:3317407/1‑150 (MQ=255) tCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGATTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCTCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCgcgc < 2:4014653/150‑1 (MQ=255) aaTGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTc > 2:2355000/1‑150 (MQ=255) gAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCaa > 1:1453696/1‑122 (MQ=255) gAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCaa < 2:1453696/122‑1 (MQ=255) gAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATc < 1:5204592/150‑1 (MQ=255) gAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATc < 1:4243091/150‑1 (MQ=255) aaGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCGGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCg > 1:480202/1‑150 (MQ=255) aGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTcg > 2:2294935/1‑140 (MQ=255) cAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCa > 2:4751971/1‑150 (MQ=255) tgcgtgAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGccc < 1:4573502/150‑1 (MQ=255) tgcgtgAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGccc < 1:4894267/150‑1 (MQ=255) gAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTAc < 2:1050445/150‑1 (MQ=255) ttGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACccac < 2:754451/150‑1 (MQ=255) ttGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACccac < 2:753583/150‑1 (MQ=255) ggTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCaa < 1:2734389/150‑1 (MQ=255) gTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctg > 2:2542836/1‑109 (MQ=25) gTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctg < 1:2542836/111‑3 (MQ=25) ttCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACt > 2:4367904/1‑150 (MQ=255) gAGCAGCGCTTGGACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACtgtg < 2:276012/150‑1 (MQ=255) agcGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGt > 2:1329006/1‑150 (MQ=255) gcgcTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTa < 1:4143869/150‑1 (MQ=255) gcgcTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTa > 2:2893613/1‑150 (MQ=255) cgcTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTac < 1:3155511/150‑1 (MQ=255) cTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACtgtg < 1:4366349/142‑1 (MQ=255) cTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACtgtg > 2:4366349/1‑142 (MQ=255) ttGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTaccac > 2:3724356/1‑150 (MQ=255) tGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTaccacc < 2:340164/150‑1 (MQ=255) aCGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGc < 1:4367904/150‑1 (MQ=255) aCGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGc > 1:1230134/1‑150 (MQ=255) gtcgAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACggg < 1:2179039/150‑1 (MQ=255) tgacccAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑GGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGc > 2:4591665/6‑150 (MQ=255) gCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGc < 1:2602544/150‑1 (MQ=255) gCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGc > 1:1992780/1‑150 (MQ=255) cAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCa < 2:2056140/150‑1 (MQ=255) cgggTGGCCTCATGCGGCACCTGGCAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGGACCACCTGCACGGGCTGGCAc < 2:5049583/149‑1 (MQ=255) ggTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACgt < 2:1000832/150‑1 (MQ=255) gCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGc > 1:783148/1‑150 (MQ=255) ccTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCa < 2:783148/150‑1 (MQ=255) cTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAg > 1:4629418/1‑150 (MQ=255) cTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAg > 1:4629181/1‑150 (MQ=255) tCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGc > 2:585031/1‑150 (MQ=255) aTGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTc > 1:3484858/1‑150 (MQ=255) ggCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCAcgc < 1:5449740/150‑1 (MQ=255) gtccaggTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAg < 2:1401753/144‑1 (MQ=255) cTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTCCCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAg > 2:2839819/1‑150 (MQ=255) gTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACTGGCGCtt < 1:585031/150‑1 (MQ=255) tGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTg < 2:1710699/150‑1 (MQ=255) gCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACGAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGa < 2:536827/150‑1 (MQ=255) gCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGa < 2:4103378/150‑1 (MQ=255) gCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGa < 2:537562/150‑1 (MQ=255) acaGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGccc > 2:1923908/1‑76 (MQ=255) acaGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCt > 1:1867560/1‑150 (MQ=255) acaGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCt < 2:4355405/150‑1 (MQ=255) aGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgc < 1:4847509/150‑1 (MQ=255) ggCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgcg < 2:2475488/150‑1 (MQ=255) ggCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgcg < 2:321684/150‑1 (MQ=255) ttggcCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGCTAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAg > 1:1557299/4‑150 (MQ=37) ttggcCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAg > 1:4201345/4‑150 (MQ=38) cagcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGt < 2:3103776/150‑1 (MQ=255) cagcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGt < 1:10297/150‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTgg < 1:248702/105‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTgg > 2:248702/1‑105 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtg < 2:45866/150‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtg > 1:3892546/1‑150 (MQ=255) ccGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgat < 1:4696311/150‑1 (MQ=255) cgcgCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatg < 2:5339425/150‑1 (MQ=255) cgcgCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatg < 1:4751971/150‑1 (MQ=255) cgcgCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtga < 1:245327/148‑1 (MQ=255) gcgcAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatga < 2:1096839/150‑1 (MQ=255) tgtCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGTTGAACACCt < 2:3583346/150‑1 (MQ=255) gtCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTg < 2:1597877/150‑1 (MQ=255) tCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACTTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTgt < 1:747038/150‑2 (MQ=255) gggCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCa < 1:4591665/150‑1 (MQ=255) gCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGt > 1:4880708/1‑150 (MQ=255) | CCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGAACACCTGGGTCAGT > NC_002947/4770799‑4771097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |