| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,814,150 | C→T | 6.6% | intergenic (+103/‑290) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,814,150 | 0 | C | T | 6.6% | 539.1 / 18.7 | 181 | intergenic (+103/‑290) | PP_4238/PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Reads supporting (aligned to +/- strand): ref base C (100/69); new base T (6/6); total (106/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAG > NC_002947/4814003‑4814299 | gaCACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaa > 2:5154894/1‑150 (MQ=255) acacATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaaa < 1:5308658/150‑1 (MQ=255) acacATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaaa < 1:5308631/150‑1 (MQ=255) tGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAg < 2:4431863/150‑1 (MQ=255) ggTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGc > 2:3419533/1‑150 (MQ=255) aTTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGc > 2:4979350/1‑150 (MQ=255) ttGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCt > 1:1067317/1‑150 (MQ=255) ttGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCt > 2:345161/1‑150 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGGAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGTTGATGTCAAACATCAGCATGCT‑‑c < 2:1357934/150‑1 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt < 1:1826857/146‑1 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt > 2:1826857/1‑146 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑c < 1:4979350/150‑1 (MQ=255) gACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑cgc > 2:2962354/1‑150 (MQ=255) gACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑cgc > 2:20218/1‑150 (MQ=255) cGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATGCT‑‑ccgaa < 2:925875/150‑5 (MQ=255) aGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGcccc > 1:3697590/1‑150 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGc < 2:5328761/135‑1 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑tt > 1:2485456/1‑150 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑tt > 1:706682/1‑150 (MQ=255) gTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑ttatt > 2:4402854/1‑150 (MQ=255) gTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑ttatt > 1:2864574/1‑150 (MQ=255) gTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑ttata > 2:800808/1‑149 (MQ=255) ttCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCGTGCAACTCAAATTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑ttatta < 1:1596891/150‑1 (MQ=255) tttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTaaaa > 1:2029897/1‑150 (MQ=255) ttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAAc > 1:3183950/1‑150 (MQ=255) tCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACt > 1:1003497/1‑150 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACcgc > 1:3299838/1‑150 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACcgc < 2:1820575/150‑1 (MQ=255) tAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTca < 2:2066574/143‑1 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 1:2086549/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:4243753/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:3369709/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:3427285/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATATCAAACATCAGCATGCTCGCGCGCCCC‑TTATTAAAACTTCACACCGCGCATAAc > 1:2229234/1‑150 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAg > 1:2000498/1‑106 (MQ=255) aaaTCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGa < 1:4951077/150‑1 (MQ=255) atcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTc < 2:4921024/150‑1 (MQ=255) atcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTc < 1:4243753/150‑1 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 1:1918903/1‑150 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 2:1548634/1‑150 (MQ=255) cACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCCGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCacac > 1:14950/1‑150 (MQ=255) gACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCt > 2:4776359/1‑150 (MQ=255) aCCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCAAGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTc > 1:2187243/1‑150 (MQ=255) cccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTca < 2:4751992/150‑1 (MQ=255) ccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 2:284896/1‑150 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcaccac > 1:3015430/1‑150 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcaccac > 1:285463/1‑150 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcaccac > 1:254835/1‑150 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCGcaccac > 1:3015395/1‑150 (MQ=255) aaTCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 2:254835/150‑1 (MQ=255) aaTCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAAAAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 2:4237455/150‑1 (MQ=255) tCCCCAGGGTGGTCTAACCCTGCAAGTCAAATTATGTAGACACCATTCTTGGGAGGTTGCGGATGTCAAACATGAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 1:2288036/150‑1 (MQ=255) ccccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt > 1:4007705/1‑78 (MQ=38) ccccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCg > 1:4387032/1‑150 (MQ=255) cccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGc > 1:2951383/1‑150 (MQ=255) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCa > 2:1779426/1‑150 (MQ=255) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACAGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTAGCa > 2:3584241/1‑150 (MQ=255) cAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCa < 2:3980524/150‑1 (MQ=255) gTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACagag < 2:1270568/134‑1 (MQ=255) gTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGaa < 1:3427285/150‑1 (MQ=255) gTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGaa > 1:484663/1‑150 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCCTTTATTAAAAATACACACCCCGCATAACAAAGAAAAAACACACGCACACCACAGAGATTACGAACGCCaaaaaa > 1:3820374/1‑148 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATaa > 1:2272941/1‑102 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATaa < 2:2272941/102‑1 (MQ=255) cTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGc > 1:274435/1‑150 (MQ=255) aCTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttctt < 1:4612708/150‑1 (MQ=255) cTCAAAATATCTAGAAACAATTCTTCTGAGCATGCTGATGTCAAACATCAGCAAGAT‑‑CGCGCCCC‑TTATTAAAAATACAAACAGCTCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCATCTTa > 1:2027178/1‑150 (MQ=255) cTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTa > 2:2408752/1‑150 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTAc > 2:2324805/1‑150 (MQ=255) tCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTAc > 1:507858/1‑150 (MQ=255) aaaaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga > 2:1021232/1‑116 (MQ=255) aaaaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 1:1021232/116‑1 (MQ=255) atatCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATaaa < 2:46754/150‑1 (MQ=255) cTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAAtata > 1:1438635/1‑150 (MQ=255) cTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAAtata > 1:1243081/1‑150 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa < 1:1761406/150‑1 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa > 1:4993179/1‑150 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa > 1:5410515/1‑150 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaa < 2:2749749/150‑1 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaa > 2:1189676/1‑150 (MQ=255) aaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaag < 1:2408752/150‑1 (MQ=255) aCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGcc > 1:5015464/1‑116 (MQ=255) cAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCTCCCC‑TTATTAAAACTTCACACCGCGCATAACTTAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCa < 2:5053404/150‑1 (MQ=255) cttcGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaa < 2:497290/150‑1 (MQ=255) ttcGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaa > 1:4195477/1‑150 (MQ=255) ggAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACt > 2:217266/1‑150 (MQ=255) aTGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaaaa < 2:2485456/150‑1 (MQ=255) tGCTGATGTTTGACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGa > 2:3297491/1‑65 (MQ=37) tGCTGATGTCAAACATCGGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc < 1:3499135/150‑1 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc > 1:2538994/1‑150 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc > 2:1627522/1‑150 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑C‑CGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 2:612478/92‑1 (MQ=255) gCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTca < 1:2652394/46‑1 (MQ=255) cTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCa < 1:823469/150‑1 (MQ=255) cTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCa < 1:5154894/150‑1 (MQ=255) tGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCAt > 1:3329250/1‑150 (MQ=255) tGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCAt < 2:5173256/150‑1 (MQ=255) tGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCAt > 1:3968282/1‑150 (MQ=255) tGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACCCGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTAt < 2:4107405/150‑1 (MQ=255) cAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAg < 1:4683540/150‑1 (MQ=255) | GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAG > NC_002947/4814003‑4814299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |