| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,814,151 | A→T | 6.7% | intergenic (+104/‑289) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,814,151 | 0 | A | T | 6.7% | 569.2 / 20.0 | 177 | intergenic (+104/‑289) | PP_4238/PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| Reads supporting (aligned to +/- strand): ref base A (98/67); new base T (6/6); total (104/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAGA > NC_002947/4814003‑4814300 | acacATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaaa < 1:5308658/150‑1 (MQ=255) acacATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCaaa < 2:2308955/150‑1 (MQ=255) aTTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGc > 2:4979350/1‑150 (MQ=255) ttGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCt > 2:345161/1‑150 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGGAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGTTGATGTCAAACATCAGCATGCT‑‑c < 2:1357934/150‑1 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt < 1:1826857/146‑1 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt > 2:1826857/1‑146 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑c > 1:2749749/1‑150 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑c > 1:5043013/1‑150 (MQ=255) tGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑c < 1:4979350/150‑1 (MQ=255) ggACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑cg > 2:4683540/1‑150 (MQ=255) gACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑cgc > 2:2962354/1‑150 (MQ=255) gACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑cgc > 2:20218/1‑150 (MQ=255) cGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCATGCT‑‑ccgaa < 2:925875/150‑5 (MQ=255) aGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGcccc > 1:4648306/1‑150 (MQ=255) aGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGcccc > 1:3697590/1‑150 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGc < 2:5328761/135‑1 (MQ=255) gCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑tt > 1:706682/1‑150 (MQ=255) gTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑ttata > 2:800808/1‑149 (MQ=255) tttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTaaaa > 1:4107405/1‑150 (MQ=255) ttCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAAc > 1:3183950/1‑150 (MQ=255) tCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACt > 1:1003497/1‑150 (MQ=255) gCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTc > 2:4351123/1‑150 (MQ=255) cAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTca < 1:4402854/150‑1 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACcgc < 2:1820575/150‑1 (MQ=255) gTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACcgc > 1:3299838/1‑150 (MQ=255) tAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTca > 1:2066574/1‑143 (MQ=255) tAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTca < 2:2066574/143‑1 (MQ=255) aaaTCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCgcgc < 1:2175781/150‑1 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:3369709/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:4243753/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaa > 2:3427285/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATATCAAACATCAGCATGCTCGCGCGCCCC‑TTATTAAAACTTCACACCGCGCATAAc > 1:2229234/1‑150 (MQ=255) ccGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATATCAAACATCAGCATGCTCGCGCGCCCC‑TTATTAAAACTTCACACCGCGCATAAc > 1:2229230/1‑150 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAg > 1:2000498/1‑106 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaaa < 1:855929/150‑1 (MQ=255) cGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaaa < 2:3372954/150‑1 (MQ=255) aatcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCTTGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGaa < 1:5014848/150‑1 (MQ=255) aatcaatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGaa < 1:3369709/150‑1 (MQ=255) aatcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACt > 1:2511616/1‑150 (MQ=255) atcTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTc < 2:4921024/150‑1 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 1:2637330/1‑150 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 1:1918903/1‑150 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 2:1548634/1‑150 (MQ=255) tcACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTcaca > 1:2859481/1‑150 (MQ=255) cACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCCGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCacac > 1:14950/1‑150 (MQ=255) gACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCt > 2:4776359/1‑150 (MQ=255) ccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 1:4903746/1‑150 (MQ=255) ccGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 2:284896/1‑150 (MQ=255) gCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcaccac > 1:3015430/1‑150 (MQ=255) aaaTCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACag > 1:5252720/1‑150 (MQ=255) aaTCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 2:4237361/150‑1 (MQ=255) aaTCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 2:254835/150‑1 (MQ=255) cTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCt > 1:3971678/1‑150 (MQ=255) tCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACACTTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 1:3427683/150‑1 (MQ=255) ccccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTTTGACATCAGCAt < 2:4007705/78‑1 (MQ=38) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCa > 2:1779426/1‑150 (MQ=255) ccACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACAGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTAGCa > 2:3584241/1‑150 (MQ=255) cAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCa < 2:4430418/150‑1 (MQ=255) gTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACagag > 1:1270568/1‑134 (MQ=255) gTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACagag < 2:1270568/134‑1 (MQ=255) tCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAAt > 1:514354/1‑150 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCCTTTATTAAAAATACACACCCCGCATAACAAAGAAAAAACACACGCACACCACAGAGATTACGAACGCCaaaaaa > 1:3820374/1‑148 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATaa > 1:2272941/1‑102 (MQ=255) tAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCa > 1:1079910/1‑150 (MQ=255) aCCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGa < 1:4288221/150‑1 (MQ=255) cTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGc > 1:274435/1‑150 (MQ=255) cAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttc < 1:4706487/150‑1 (MQ=255) aCTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttctt > 1:161099/1‑150 (MQ=255) cTCAAAATATCTAGAAACAATTCTTCTGAGCATGCTGATGTCAAACATCAGCAAGAT‑‑CGCGCCCC‑TTATTAAAAATACAAACAGCTCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCATCTTa > 1:2027178/1‑150 (MQ=255) aaaaTATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACaga < 1:1021232/116‑1 (MQ=255) cTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAAtata > 1:1438635/1‑150 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCttt > 2:2419416/1‑113 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCttt < 1:2419416/113‑1 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttc > 2:2341175/1‑136 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGcttc < 1:2341175/136‑1 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa < 1:1761406/150‑1 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa > 1:5410515/1‑150 (MQ=255) tAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaa > 1:4993179/1‑150 (MQ=255) gAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACaaa > 1:776490/1‑82 (MQ=255) gAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaaga > 1:3310886/1‑150 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaa > 2:1189676/1‑150 (MQ=255) aaaCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATaagaa < 2:2749749/150‑1 (MQ=255) aCAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGcc < 2:5015464/116‑1 (MQ=255) cttcGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaa < 2:497290/150‑1 (MQ=255) ttcGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaa > 1:3953747/1‑150 (MQ=255) ttcGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGaaa > 1:4195477/1‑150 (MQ=255) ggAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACt > 2:217266/1‑150 (MQ=255) aTGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTaaaaa < 2:2485456/150‑1 (MQ=255) tGCTGATGTTTGACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGa > 2:3297491/1‑65 (MQ=37) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc > 2:1627522/1‑150 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc < 1:2962354/150‑1 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc > 1:2539091/1‑150 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACGTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAAc < 2:4571472/150‑1 (MQ=255) tGCTGATGTCAAACATCAGCATGCT‑‑C‑CGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTc < 2:612478/92‑1 (MQ=255) gCTGATGTTTGACATCAGCATGCT‑‑CGCGACCC‑TTATTACAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCAAAGAGCTTTCGCACGCCAGACTCAGAAGCTTCTTACATACATATAAGAAGCACAGAAAACTCAAAAcc > 2:5137780/1‑150 (MQ=255) tGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCAt < 2:5173256/150‑1 (MQ=255) tCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCa > 1:286534/1‑150 (MQ=255) aaaCATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTcac > 2:3948212/1‑71 (MQ=255) aaaCATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAGa > 1:1061977/1‑150 (MQ=255) | GACACATTGGTGATTGGACGCAGGCCGTTCTTTCGCAAGCAGTAAATCTCCCGAAATCAATCTCACGACCCGGCAAATCTATCCCCACGCAGGTCTAACCCTGCAACTCAAAATATCTAGAAACAATTCTTCGGAGCATGCTGATGTCAAACATCAGCATGCT‑‑CGCGCCCC‑TTATTAAAACTTCACACCGCGCATAACAAAGAACACTCACACGCTCACCACAGAGCTTTCGCACGCCAGAATCAGAAGCTTCTTACATAAATATAAGAAGCACTGAAAACTAAAAACCATTATCAGA > NC_002947/4814003‑4814300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |