| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,820,189 | A→G | 5.6% | intergenic (+123/+14) | PP_4242 → / ← pvdL | conserved protein of unknown function with Rhs repeat‑associated core domain/non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,820,189 | 0 | A | G | 5.6% | 620.9 / 15.9 | 195 | intergenic (+123/+14) | PP_4242/pvdL | conserved protein of unknown function with Rhs repeat‑associated core domain/non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (93/91); new base G (5/6); total (98/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
Only 100 of 197 total aligned reads displayed.
CTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCGG > NC_002947/4820040‑4820337 | cTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCaa > 1:3113333/1‑150 (MQ=255) aaGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAgc > 2:5284336/1‑150 (MQ=255) cttttGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGc < 1:3671031/148‑1 (MQ=255) cGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCTTGGCGCCCCttt < 2:893543/150‑3 (MQ=255) cGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGc < 2:2897219/150‑1 (MQ=255) gTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGcc > 1:3053479/1‑150 (MQ=255) gTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGAGGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGcc < 1:4635017/150‑1 (MQ=255) tttGGCGATTATTAGCCCTAGATTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGccc < 1:122425/150‑1 (MQ=255) tGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCAt < 2:5044116/150‑1 (MQ=255) tGGCGATTATTAGCCCTAGCTTTGACGGCCTCTTCACGAAAATAGCCACCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCAt < 2:4392084/150‑1 (MQ=255) ggCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCTTGGCGCCCCtttcattg < 1:614232/150‑8 (MQ=255) cGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATcac > 1:2791280/1‑150 (MQ=255) ttaGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGcccc > 2:385926/1‑150 (MQ=255) aGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTc < 2:2111001/150‑1 (MQ=255) aGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTc < 1:3739193/150‑1 (MQ=255) cccTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCa < 2:1728477/150‑1 (MQ=255) cccTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCa < 2:2017690/150‑1 (MQ=255) cTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGt > 2:3422464/1‑150 (MQ=255) cTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGt > 1:1658788/1‑150 (MQ=255) tAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGtt < 2:276788/150‑1 (MQ=255) tttGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGc > 2:2985477/1‑150 (MQ=255) tttGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGc > 1:4629275/1‑150 (MQ=255) tttGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGc > 1:744547/1‑150 (MQ=255) tctTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAAACCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGATCCGCCATCAGGTCa > 2:3718543/1‑150 (MQ=255) ctTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCAc < 2:5057294/150‑1 (MQ=255) ctTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCAc > 1:5077970/1‑150 (MQ=255) ctTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCAc < 2:2674747/150‑1 (MQ=255) ttCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACt > 2:3349974/1‑150 (MQ=255) ttCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACt > 1:1938718/1‑150 (MQ=255) aCGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAg > 1:5044075/1‑150 (MQ=255) aTAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTc < 1:3763462/150‑1 (MQ=255) aTAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTc < 1:3712249/150‑1 (MQ=255) ccAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGAcc < 1:4293984/150‑1 (MQ=255) cAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCgg < 2:3132629/143‑1 (MQ=255) cAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCgg > 1:3132629/1‑143 (MQ=255) aGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCCGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCtt > 2:4956292/1‑150 (MQ=255) aaCGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtc < 1:2276953/150‑1 (MQ=255) cGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtcat < 1:82626/150‑1 (MQ=255) gAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCCCTGAACGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGtcatc < 2:4549491/150‑1 (MQ=255) gACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATcc > 2:2616747/1‑150 (MQ=255) cTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAg < 1:1183895/150‑1 (MQ=255) cTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAg < 1:1454792/150‑1 (MQ=255) tGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAgc > 1:5382902/1‑150 (MQ=255) ccTTATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACt < 1:11925/120‑1 (MQ=255) ccTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACt > 2:11925/1‑120 (MQ=255) cTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCa < 1:4652250/150‑1 (MQ=255) tgattgatGTGCAAATCCGGATGAACGACTCTGCCGCAGTGTGCGCTACGCGACCAATGAAAGGGGCGGCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCAGTGAGCCGGTCGAACTTGTCATCATGCAGCGCAc > 2:443988/1‑150 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGccc > 1:5349854/1‑76 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGccc < 2:5349854/76‑1 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGt < 2:307378/112‑1 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTg > 2:2493514/1‑150 (MQ=255) attgatCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTg > 2:1523330/1‑150 (MQ=255) atCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCt < 1:3365975/150‑1 (MQ=255) atCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCt < 2:3200597/150‑1 (MQ=255) cTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGCCCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGc < 2:4626569/150‑1 (MQ=255) cTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGc < 2:4137296/150‑1 (MQ=255) tGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCa > 1:1007248/1‑150 (MQ=255) gCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGc < 1:4411994/148‑1 (MQ=255) gCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGc > 2:4411994/1‑148 (MQ=255) gCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAg > 1:302379/1‑150 (MQ=255) gCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAg > 2:3121301/1‑150 (MQ=255) gCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAg > 2:1821279/1‑150 (MQ=255) aaaTCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGcc < 1:598334/150‑1 (MQ=255) aTCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGcccc < 1:4958844/150‑1 (MQ=255) tCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCAAGCGCACTGCCCTGCAGCCCCt > 1:3234209/1‑150 (MQ=255) cGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACCGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGt < 2:5104897/150‑1 (MQ=255) cGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGt < 1:4032946/150‑1 (MQ=255) cGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGt < 2:4865776/150‑1 (MQ=255) gAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATa > 1:4450698/1‑150 (MQ=255) gACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCg < 2:470809/150‑1 (MQ=255) gACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCg < 1:2350187/150‑1 (MQ=255) cTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGc < 2:1944091/150‑1 (MQ=255) gCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAAc < 1:353956/150‑1 (MQ=255) tgtgCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCa < 2:788235/150‑1 (MQ=255) tgCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCAcc < 1:2717110/150‑1 (MQ=255) cgcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGt > 2:2732270/1‑150 (MQ=255) cgcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGt > 2:1094646/1‑150 (MQ=255) gcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtg < 2:3574267/150‑1 (MQ=255) gcAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtg < 1:4350109/150‑1 (MQ=255) cccGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtgctgc > 1:373402/1‑150 (MQ=255) ccGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCa > 1:2517294/1‑150 (MQ=255) gACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACt > 2:2044962/1‑150 (MQ=255) cAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGa > 2:3541108/1‑150 (MQ=255) cAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGa < 1:4909721/150‑1 (MQ=255) cAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGa > 1:3779342/1‑150 (MQ=255) cAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGa > 2:2315376/1‑150 (MQ=255) aaTGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGaa > 2:4041115/1‑150 (MQ=255) tGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAAc > 1:1806500/1‑125 (MQ=255) tGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACa > 1:2867521/1‑150 (MQ=255) gAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACAt > 2:5398636/1‑150 (MQ=255) gcaGGGGCGCTTGGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATc > 1:3951519/3‑150 (MQ=255) caGGGGCGCTTGGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGccc > 2:3879304/2‑103 (MQ=255) caGGGGCGCTTGGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGccc < 1:3879304/102‑1 (MQ=255) ggggCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGcc < 2:2491673/150‑1 (MQ=255) ggCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCg > 1:5155415/1‑139 (MQ=255) gcgcCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGc > 1:929172/1‑150 (MQ=255) gcgcCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGc > 1:1529222/1‑150 (MQ=255) gcCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGtgctgc > 1:4693214/1‑131 (MQ=255) cAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCg < 2:3612691/150‑1 (MQ=255) aaGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCgg > 1:1878870/1‑150 (MQ=255) | CTAAGGGAACCGTTTGGCGATTATTAGCCCTAGCTTTGAGGGCCTCTTCACGAAAATAGCCAGCAACGAGCGACTGCCTGATTGATCTGCAAATCCGGATGAACGACTCAGCCGCAGTGTGCGCAACCCGACCAATGAAAGGGGCGCCAAGCGCCCCTGCCCATCACAGCCCCTCCAGTTCCGCCATCAGGTCACTGAGCCGGTCGACCTTGTCATCATCCAGCGCACTGCCCTGCAGCCCCTGTACATACTCGGCCAACGCCTCCACCGTGCTGCACTCGAACATCGCCCGCAGCGG > NC_002947/4820040‑4820337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |