Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,882,410 T→G 5.1% A351A (GCT→GCG)  PP_4289 → membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,882,4100TG 5.1% 537.3 / 12.9 158A351A (GCT→GCG) PP_4289membrane protein
Reads supporting (aligned to +/- strand):  ref base T (70/80);  new base G (6/2);  total (76/82)
Fisher's exact test for biased strand distribution p-value = 1.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01

Only 100 of 206 total aligned reads displayed.

AGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCCACAGCA  >  NC_002947/4882261‑4882559
                                                                                                                                                     |                                                                                                                                                     
aGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgct                                                                                                                                                       <  2:4107610/150‑1 (MQ=255)
  cccTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgc                                                                                                                                                     >  2:3424783/1‑150 (MQ=255)
   ccTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgcc                                                                                                                                                    >  2:570933/1‑150 (MQ=255)
       aGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgcccagg                                                                                                                                                <  1:4516709/150‑1 (MQ=255)
        gCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgcccaggc                                                                                                                                               <  1:2419343/150‑1 (MQ=255)
         cAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgcccaggcc                                                                                                                                              >  2:1691312/1‑150 (MQ=255)
           aGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgcccaggccgc                                                                                                                                            <  1:1333404/150‑1 (MQ=255)
              cGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCctgggcagcggcctgggccggtgc                                                                                                                                         <  1:1588684/150‑1 (MQ=255)
               gCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCcaggccgctgcccaggccgctgcc                                                                                                                                        <  2:931770/150‑1 (MQ=255)
               gCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCcaggccgctgcccaggccgctgcc                                                                                                                                        >  2:476701/1‑150 (MQ=255)
                 aGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAggccgctgcccaggccgctgccca                                                                                                                                      <  2:1795160/150‑1 (MQ=255)
                  gCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCAGCGGCctgggcagcggcctgggccggtgcttgc                                                                                                                                     <  2:3702180/150‑5 (MQ=38)
                    gAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCcgctgcccaggccgctgcccaggc                                                                                                                                   >  1:3708160/1‑150 (MQ=255)
                     aaGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCgctgcccaggccgctgcccaggcc                                                                                                                                  <  1:5432370/150‑1 (MQ=255)
                       gATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCgg                                                                                                                                >  2:1309089/1‑150 (MQ=255)
                         tCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAg                                                                                                                              >  1:4681353/1‑150 (MQ=255)
                                ccAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGa                                                                                                                       >  1:1522143/1‑150 (MQ=255)
                                ccAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGa                                                                                                                       >  1:1310700/1‑150 (MQ=255)
                                 cAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGgcccaggccgctgccca                                                                                                                                                  >  2:3045411/1‑122 (MQ=255)
                                 cAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGaa                                                                                                                      >  1:1265133/1‑150 (MQ=255)
                                  aGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAAt                                                                                                                     <  2:239408/150‑1 (MQ=255)
                                   gCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGACtt                                                                                                                    >  1:4969079/1‑150 (MQ=255)
                                   gCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAAtt                                                                                                                    <  2:1310700/150‑1 (MQ=255)
                                      gCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGa                                                                                                                 <  1:2967005/150‑1 (MQ=255)
                                        tGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACa                                                                                                               >  2:4831957/1‑150 (MQ=255)
                                        tGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACa                                                                                                               <  2:5262056/150‑1 (MQ=255)
                                        tGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACa                                                                                                               <  1:2157997/150‑1 (MQ=255)
                                        tGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACa                                                                                                               <  1:232953/150‑1 (MQ=255)
                                         gCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACaa                                                                                                              <  1:263252/150‑1 (MQ=255)
                                         gCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACaa                                                                                                              <  1:263027/150‑1 (MQ=255)
                                         gCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACaa                                                                                                              <  2:2318507/150‑1 (MQ=255)
                                            ggCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGACTGCGACAAGag                                                                                                           >  2:4390410/1‑149 (MQ=255)
                                            ggCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGAt                                                                                                           >  1:3828215/1‑150 (MQ=255)
                                               aaCTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCca                                                                                                        <  1:1489327/150‑1 (MQ=255)
                                                aCTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCcac                                                                                                       <  1:585176/150‑1 (MQ=255)
                                                  tGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACaa                                                                                                     >  1:79156/1‑150 (MQ=255)
                                                  tGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACaa                                                                                                     >  1:17079/1‑150 (MQ=255)
                                                  tGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACaa                                                                                                     >  1:79246/1‑150 (MQ=255)
                                                       tAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCa                                                                                                >  1:189377/1‑150 (MQ=255)
                                                         ggcggcAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATc                                                                                              <  1:3092580/150‑1 (MQ=255)
                                                            ggcAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAg                                                                                           >  2:2110102/1‑150 (MQ=255)
                                                                   cGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCt                                                                                    <  2:879451/150‑1 (MQ=255)
                                                                           gAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACtgtg                                                                            >  2:3312784/1‑150 (MQ=255)
                                                                             gcagcGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACtgtgtg                                                                          <  1:4316512/150‑1 (MQ=255)
                                                                              cagcGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGc                                                                         <  2:2613186/150‑1 (MQ=255)
                                                                                gcGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCa                                                                       <  2:2759322/150‑1 (MQ=255)
                                                                                  gTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACt                                                                     <  2:821028/150‑1 (MQ=255)
                                                                                   tGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTc                                                                    <  2:3708160/150‑1 (MQ=255)
                                                                                     ccGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGt                                                                  <  1:3034914/150‑1 (MQ=255)
                                                                                      cGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCTAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTc                                                                 <  1:835546/150‑1 (MQ=255)
                                                                                      cGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTc                                                                 <  2:3897231/150‑1 (MQ=255)
                                                                                       gAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTcc                                                                >  2:1621958/1‑150 (MQ=255)
                                                                                       gAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTcc                                                                >  2:4366945/1‑150 (MQ=255)
                                                                                             gccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCg                                                          >  2:5150091/1‑150 (MQ=255)
                                                                                             gccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCg                                                          >  2:4242487/1‑150 (MQ=255)
                                                                                             gccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCg                                                          >  2:1117196/1‑150 (MQ=255)
                                                                                             gccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCg                                                          >  2:5376148/1‑150 (MQ=255)
                                                                                              ccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGa                                                         <  2:2805618/150‑1 (MQ=255)
                                                                                              ccgccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGa                                                         <  1:5296674/150‑1 (MQ=255)
                                                                                                gccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCATTGTGTGCCACTCGTCCAAGCCGAcc                                                       >  1:5058930/1‑150 (MQ=255)
                                                                                                gccAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGAcc                                                       >  1:3325586/1‑150 (MQ=255)
                                                                                                       cTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCAc                                                <  1:5223136/150‑1 (MQ=255)
                                                                                                        tGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACt                                               >  2:2953229/1‑150 (MQ=255)
                                                                                                        tGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACt                                               <  2:3800155/150‑1 (MQ=255)
                                                                                                         gCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAAATCGACAAGATCCACAATGTCAACCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTg                                              >  2:2588068/1‑150 (MQ=255)
                                                                                                           cGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGtt                                            <  1:2511482/150‑1 (MQ=255)
                                                                                                           cGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGtt                                            <  1:4866514/150‑1 (MQ=255)
                                                                                                           cGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCAAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGtt                                            >  1:1663886/1‑150 (MQ=255)
                                                                                                            gAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTc                                           <  2:4378325/150‑1 (MQ=255)
                                                                                                            gAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTc                                           <  2:3625912/150‑1 (MQ=255)
                                                                                                             aaGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCa                                          <  1:2617199/150‑1 (MQ=255)
                                                                                                               gCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGc                                        <  1:3191571/150‑1 (MQ=255)
                                                                                                                   ccgccgCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCg                                    >  1:4233710/1‑150 (MQ=255)
                                                                                                                    cgccgcACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGc                                   <  2:5061078/150‑1 (MQ=255)
                                                                                                                      ccgcACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCa                                                                                            >  1:2601678/1‑91 (MQ=255)
                                                                                                                       cgcACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGcccc                                >  1:2803021/1‑150 (MQ=255)
                                                                                                                       cgcACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGcccc                                <  2:1864530/150‑1 (MQ=255)
                                                                                                                                gccacctccGGCCTGGGCAGCGGCCTGGGCAGCGGCCTGGGCCGGTGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGt                       >  2:2206550/8‑150 (MQ=25)
                                                                                                                                gcAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGt                       <  1:1079255/150‑1 (MQ=255)
                                                                                                                                gcAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGt                       <  1:4396325/150‑1 (MQ=255)
                                                                                                                                  cacctccGGCCTGGGCAGCGGCCTGGGCAGCGGCCTGGGCCGGTGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGGTCAGCAcc                                     <  2:2975912/129‑1 (MQ=21)
                                                                                                                                  aaGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGa                     <  2:4634319/150‑1 (MQ=255)
                                                                                                                                     cACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGt                  <  1:5090722/150‑1 (MQ=255)
                                                                                                                                     cACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGt                  >  1:5152836/1‑150 (MQ=255)
                                                                                                                                     cACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGt                  >  2:1105847/1‑150 (MQ=255)
                                                                                                                                      aCCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGtt                 >  1:2811484/1‑150 (MQ=255)
                                                                                                                                      aCCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGtt                 >  1:1673641/1‑150 (MQ=255)
                                                                                                                                       ccGGCCTGGGCAGCGGCCTGGGCAGCGGCCTGGGCCGGTGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCg                                                          >  2:2562005/1‑108 (MQ=21)
                                                                                                                                       ccGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTc                <  1:2336661/150‑1 (MQ=255)
                                                                                                                                       ccGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTc                <  2:1423775/150‑1 (MQ=255)
                                                                                                                                       ccGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTc                <  1:4613591/150‑1 (MQ=255)
                                                                                                                                       ccGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTc                <  1:1309089/150‑1 (MQ=255)
                                                                                                                                        cGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCg               >  2:1386790/1‑150 (MQ=255)
                                                                                                                                         ggCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGa              <  2:1265085/150‑1 (MQ=255)
                                                                                                                                         ggCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGa              <  2:3864165/150‑1 (MQ=255)
                                                                                                                                         ggCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGa              <  1:4831957/150‑1 (MQ=255)
                                                                                                                                                  cgctgcccaggccgctgcccaggcCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCcaca     >  2:3671714/1‑150 (MQ=255)
                                                                                                                                                    ctgcccaggccgctgcccaggccgGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCCAcagc   <  1:3948304/150‑1 (MQ=255)
                                                                                                                                                     tgcccaggccgctgcccaggccgGAGGTGTCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCCAcagca  <  2:1174987/150‑1 (MQ=255)
                                                                                                                                                     tgcccaggccgctgcccaggccgGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCCAcagca  <  2:2624137/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGCCCAGGCCGCTGCCCAGGCCGGAGGTGGCGAATTCGACAAGATCCACAATGTCATCCAGGAACGCTGCACTGTGTGCCACTCGTCCAAGCCGACCAGCCCACTGTTCAGCACCGCCCCTGCCGGCGTGATGTTCGACACTCCACAGCA  >  NC_002947/4882261‑4882559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑