| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,990,334 | T→G | 5.5% | intergenic (+34/+60) | ycgR → / ← PP_4398 | flagellar brake protein YcgR/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,990,334 | 0 | T | G | 5.5% | 521.2 / 12.5 | 155 | intergenic (+34/+60) | ycgR/PP_4398 | flagellar brake protein YcgR/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base T (60/86); new base G (5/4); total (65/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 163 total aligned reads displayed.
ACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCGGCGCCTGCAT > NC_002947/4990187‑4990483 | accTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGa < 1:2927529/150‑1 (MQ=255)accTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGa < 1:275883/150‑1 (MQ=255)accTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGa < 2:4577765/150‑1 (MQ=255)accTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGa < 1:4874181/150‑1 (MQ=255) tttGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGt < 1:1355919/150‑1 (MQ=255) tttGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGt < 2:573981/150‑1 (MQ=255) tttGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGt > 2:5284464/1‑150 (MQ=255) gCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGc < 2:790747/150‑1 (MQ=255) gCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGc < 2:4810629/150‑1 (MQ=255) ccGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCg > 1:2450742/1‑150 (MQ=255) cGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGt > 2:2549762/1‑150 (MQ=255) ggCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGtt < 2:4095567/150‑1 (MQ=255) gcgtgcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGttt < 2:606370/150‑1 (MQ=255) gcgtgcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGttt < 1:982082/150‑1 (MQ=255) gtgcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTGGGTCGGTAAAACAGAACACGCCACCTCAGCAGGTGGCGTTTTc < 1:1379211/150‑1 (MQ=255) gtgcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTCAGCAGGTGGCGTTTTc < 1:4534998/150‑1 (MQ=255) tgcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCa > 1:5049025/1‑150 (MQ=255) gcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAt < 1:2543104/150‑1 (MQ=255) gcgtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAt > 2:467709/1‑150 (MQ=255) cgtTTCCACACCCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAtt < 2:1530076/150‑1 (MQ=255) gtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGTTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAttt < 2:490710/150‑1 (MQ=255) gtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAttt < 2:488270/150‑1 (MQ=255) gtTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCAttt < 1:3391414/150‑1 (MQ=255) tttCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGtttt < 1:636371/144‑1 (MQ=255) tttCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTtg > 2:4824489/1‑150 (MQ=255) ccACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTgtgt > 1:4496360/1‑150 (MQ=255) cacaACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGtt > 1:1008196/1‑150 (MQ=255) acaACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGttt > 1:2108413/1‑150 (MQ=255) aCCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTctg < 2:4728782/150‑1 (MQ=255) tGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTctgctg < 1:3168768/150‑1 (MQ=255) tGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTctgctg > 2:2673817/1‑150 (MQ=255) cAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGcc < 1:1198142/150‑1 (MQ=255) ggCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGc < 2:4304933/150‑1 (MQ=255) gcgcaAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTcgcg < 1:1684249/150‑1 (MQ=255) cgcaAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCgg < 1:3973943/150‑1 (MQ=255) cgcaAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCgg > 1:3028531/1‑150 (MQ=255) aTCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAAc < 1:1133966/150‑1 (MQ=255) gagaGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTCAGCAGGTGGCGTTTTct < 1:3089538/109‑2 (MQ=38) agagTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGc < 2:4005059/150‑1 (MQ=255) agagTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTGTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGc > 2:3994295/1‑150 (MQ=255) agTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTc < 2:1140559/150‑1 (MQ=255) agTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTc < 2:327391/150‑1 (MQ=255) agTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTCCGCGGGTAAACCCGCTc < 1:4678541/150‑1 (MQ=255) tttCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTtgt > 2:2292124/1‑109 (MQ=255) tttCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCt < 2:1696445/150‑1 (MQ=255) tgtACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACAcc < 2:5059329/150‑1 (MQ=255) tACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGa < 1:3409238/150‑1 (MQ=255) cAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACtt > 1:1994319/1‑150 (MQ=255) gCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGc < 1:716563/150‑1 (MQ=255) cTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCt < 1:2217461/150‑1 (MQ=255) gCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGa < 2:3457457/150‑1 (MQ=255) gCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGa < 2:3665399/150‑1 (MQ=255) gCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGa < 2:4306767/150‑1 (MQ=255) cAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGAc < 1:991747/150‑1 (MQ=255) cAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGAc < 2:4473675/150‑1 (MQ=255) cAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTAGCGGGTAAACCCGCTCCTACACCGACTTGCTGAc > 1:1041188/1‑150 (MQ=255) aGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCa < 1:3948657/150‑1 (MQ=255) aGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCa < 2:3530076/150‑1 (MQ=255) gcggcgGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGgcg > 2:3788115/1‑150 (MQ=255) gcggcgGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGgcg > 2:2878781/1‑150 (MQ=255) cggcggTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTGCACCGACTTGCTGACCTCTTCAGgcgc < 1:4502/150‑1 (MQ=255) ttCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGTCTGGCCGCTACGCGGGTAAACCCGCTCCTACACCGACATGCTGACCTCAACAGGCGCCTGTtg > 2:3645820/1‑150 (MQ=255) ttCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTtg < 1:41306/150‑1 (MQ=255) ttCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTtg < 2:3466625/150‑1 (MQ=255) ttCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTtg > 2:3397027/1‑150 (MQ=255) aaGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTgcgc < 1:277346/150‑1 (MQ=255) gACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGcc < 1:923660/150‑1 (MQ=255) tattGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTtctc < 1:1481885/150‑1 (MQ=255) tattGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTtctc < 1:5058601/150‑1 (MQ=255) ttGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCtt < 1:1313914/150‑1 (MQ=255) ttGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCtt > 1:3621873/1‑150 (MQ=255) tGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTc > 2:1627317/1‑150 (MQ=255) gATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCGTCGCGGGTAAAACCGCTCCTACACCCACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCGTCTCTTCa > 1:1957832/1‑150 (MQ=255) tcgtcgGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGTCCTCTTCAGGCGCCTGTTGCTGCGCGCCCGGCTCTTCATc > 1:3486623/1‑150 (MQ=255) tcgtcgGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATc < 2:2054176/150‑1 (MQ=255) tcgtcgGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATc > 1:3486976/1‑150 (MQ=255) tcggtcggTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGATGCTCGCCCTTCTCTTCATCCTc < 2:5159367/150‑1 (MQ=255) gtcggtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTc > 2:2996589/1‑87 (MQ=255) gtcggtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTc < 1:2996589/87‑1 (MQ=255) gtcggtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGgt < 2:1348976/150‑1 (MQ=255) ggtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTCAACCCGCGCCGACACCGACTTGCTGACCGCTTCAGGCGCCGGTTGCTGCGCGCCCGTCTCTTCATCCTCGGTGTc > 1:5134848/1‑150 (MQ=255) ggtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTc < 1:5284464/150‑1 (MQ=255) gtAAAAGTGTAAACGGCACCTGCTGTGGTGGAGTTTTCATTTGTGTTTCTGGTGGGCTGGCCGCTTCGCGGGTAAACAGGCTCGTACTCGGAGTTGGTGTCCTCTTCAGGCGCGGGTTGCTGCGCGCCCTTCTCTTCTGCGTGGGTGTCt < 2:1332438/150‑1 (MQ=255) gtAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCt < 1:467709/150‑1 (MQ=255) tAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCtt < 2:4424129/150‑1 (MQ=255) aaaCAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCa > 1:4285939/1‑150 (MQ=255) aaaCAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCa < 2:5049025/150‑1 (MQ=255) aCAGAAATCGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAgc > 2:2128676/1‑150 (MQ=255) tgAAAACGCCACCTCAGCAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCGGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCGTCATCCTCGGTGTCTTCAgccg > 2:1918964/2‑150 (MQ=255) gAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAgccgc < 2:4485715/150‑1 (MQ=255) aaaCGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCa > 2:221289/1‑150 (MQ=255) aaCGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAAACCGCTCCTACAACGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCGTCTCTTCATCCTCGGTGTCTTCAGCCGCCAc > 1:1162165/1‑150 (MQ=255) aCGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCAcc < 1:1627317/150‑1 (MQ=255) cGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCg > 2:2155608/1‑150 (MQ=255) cGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCg > 2:1604548/1‑150 (MQ=255) aCCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGCCTTCAGCCGCCACCGgcgc < 1:563090/150‑1 (MQ=255) ctgAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCGGCGCCTGCa < 1:2971220/150‑1 (MQ=255) tgAGGTGGCGTTTTCATTTGTTTTTATGCTGGGCTGGCCGCGTCGCCGGTAAACCCGCACCCACACCCACAAGCTGACCTAATAAGGCCCCAGTTGCTGCGCGCCCATCAATTCAAACACGGGGTAATAATCCGCCACCCGCCCCAGCaa > 1:2951158/1‑149 (MQ=255) tgAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCGGCGCCTGCAt < 1:1772068/150‑1 (MQ=255) tgAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCGGCGCCTGCAt < 1:4299833/150‑1 (MQ=255) | ACCTTTGCCGGCGTGCGTTTCCACAACCTGAGCGGGCAGGCGCAGCGCAAGATCGAGAGTTTCGTGTACCAGCTGCAGCGTGAGGCGCGGCGGTTCGACAAGGACGATTATTGATCGTCGGTCGGTAAAACAGAAAACGCCACCTGCTGAGGTGGCGTTTTCATTTGTGTTTCTGCTGGGCTGGCCGCTTCGCGGGTAAACCCGCTCCTACACCGACTTGCTGACCTCTTCAGGCGCCTGTTGCTGCGCGCCCTTCTCTTCATCCTCGGTGTCTTCAGCCGCCACCGGCGCCTGCAT > NC_002947/4990187‑4990483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |