| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,002,711 | G→A | 9.5% | intergenic (+211/‑1475) | PP_4407 → / → PP_4409 | gamma‑aminobutyrate transporter/site‑specific recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,002,711 | 0 | G | A | 9.5% | 268.2 / 14.6 | 95 | intergenic (+211/‑1475) | PP_4407/PP_4409 | gamma‑aminobutyrate transporter/site‑specific recombinase |
| Reads supporting (aligned to +/- strand): ref base G (45/41); new base A (7/2); total (52/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
CAAGATGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGC > NC_002947/5002562‑5002860 | cAAGATGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTCTCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTg < 1:5398106/150‑1 (MQ=255)cAAGATGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTg > 2:2971427/1‑150 (MQ=255) gATGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGAc < 1:4494248/150‑1 (MQ=255) tGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTc < 1:3624602/150‑1 (MQ=255) aaTGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTACCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGc < 1:1806708/150‑1 (MQ=255) aTGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCa < 2:4930386/150‑1 (MQ=255) cGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAg > 2:3595353/1‑150 (MQ=255) gagaATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGc > 2:2054328/1‑150 (MQ=255) agaATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCt < 2:1289245/150‑1 (MQ=255) aaTGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGc > 1:2691710/1‑150 (MQ=255) caggcaggAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGc < 1:4464005/150‑1 (MQ=255) caggcaggAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGc < 2:5192063/150‑1 (MQ=255) caggcaggAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGc > 2:2737486/1‑150 (MQ=255) ggcaggAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGa < 2:4829350/150‑1 (MQ=255) caggAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACt > 1:3326915/1‑150 (MQ=255) aCCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTg > 1:2069212/1‑150 (MQ=255) cccTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTgg < 2:4414743/150‑1 (MQ=255) ccTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGc < 2:1308206/150‑1 (MQ=255) ccTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGc > 1:947000/1‑150 (MQ=255) ttATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCtg < 2:4501224/150‑1 (MQ=255) tCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTgtgt < 2:673495/150‑1 (MQ=255) tCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTgtgt < 2:673364/150‑1 (MQ=255) cTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGtt < 2:2025678/150‑1 (MQ=255) ggggTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTaa < 2:1654486/150‑1 (MQ=255) ggggGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAAc < 1:706493/150‑1 (MQ=255) gggTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAAc < 1:705689/150‑1 (MQ=255) gCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCt > 2:4962447/1‑150 (MQ=255) cctcctGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTc > 2:3457346/1‑150 (MQ=255) cctcctGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTc > 2:3457535/1‑150 (MQ=255) ctcctGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTcc > 1:1238764/1‑150 (MQ=255) tcctGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTccc > 2:3953031/1‑150 (MQ=255) tcctGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTccc > 2:2446214/1‑150 (MQ=255) gcctgATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGATTTTTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATcc < 1:970115/150‑1 (MQ=255) cctgATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCt > 2:5349681/1‑150 (MQ=255) cctgATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCt < 1:5362675/150‑1 (MQ=255) gATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTgc < 2:1869947/150‑1 (MQ=255) cAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGcgcc > 2:5017863/1‑150 (MQ=255) cAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGcgcc > 2:5017879/1‑150 (MQ=255) cGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTa < 2:75984/150‑1 (MQ=255) gtggtgCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAg < 2:2420938/150‑1 (MQ=255) ggtgCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGt < 1:2253248/150‑1 (MQ=255) gtgCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGtt > 1:1802817/1‑150 (MQ=255) gCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCt < 1:4777834/150‑1 (MQ=255) gCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCt < 1:4777876/150‑1 (MQ=255) tATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTAAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTAc < 1:5339797/150‑1 (MQ=255) tGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGa > 1:2553689/1‑150 (MQ=255) tGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGa > 1:2628660/1‑150 (MQ=255) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCTGCAGGAGTCCAGACTCCTGc > 2:461863/1‑64 (MQ=37) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCTGCAGGAGTCCAGACTCCTGc < 1:461863/64‑1 (MQ=37) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATc < 2:1443904/150‑1 (MQ=255) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATc < 2:1443894/150‑1 (MQ=255) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATc > 2:4865496/1‑150 (MQ=255) tCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATc > 1:3614794/1‑150 (MQ=255) gATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCg > 1:571465/1‑150 (MQ=255) aTTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCga < 1:4909459/150‑1 (MQ=255) tttCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCgaga < 1:4622073/150‑1 (MQ=255) cGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACt > 1:1299720/1‑150 (MQ=255) cGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACt < 2:2250911/150‑1 (MQ=255) cGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACt > 1:1299981/1‑150 (MQ=255) gTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTg > 1:3667809/1‑150 (MQ=255) tAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGa < 1:3448655/150‑1 (MQ=255) tAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCAATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCAGTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGa > 1:5044531/1‑150 (MQ=255) agtaCTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGAc > 1:987725/1‑150 (MQ=255) taCTTCTTCGTATTGTTGTTTTCCGAAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTAAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGc < 1:927618/150‑1 (MQ=255) taCTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGc > 1:3840407/1‑150 (MQ=255) taCTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGc > 2:3310548/1‑150 (MQ=255) taCTTCTTCGTAGAGTTGTTTTACGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATACTTGCGCCGCTCCCTAGGATCTGTACGAAATCCCGAGAAACTGAATCGACGc > 2:3310555/1‑150 (MQ=255) cttcttCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGccc < 1:2637828/150‑1 (MQ=255) ttcttcGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCga < 1:4447940/131‑1 (MQ=255) ttcttcGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCga > 2:4447940/1‑131 (MQ=255) cttcGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTc > 1:521328/1‑150 (MQ=255) ttcGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCg > 1:3621082/1‑150 (MQ=255) gTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGa > 2:1216862/1‑150 (MQ=255) tAGTGTTGTTTTCCGCTGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAg < 1:4104711/150‑1 (MQ=255) tAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAg > 2:8352/1‑150 (MQ=255) gttgttTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGa < 2:1089716/150‑1 (MQ=255) ttgttTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGaa > 1:822387/1‑150 (MQ=255) ttttCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAAtt > 1:1536238/1‑150 (MQ=255) ttttCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAAtt > 2:4546405/1‑150 (MQ=255) ttCTGCAGGAGTCCAGACTCCTGCGGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCt > 2:1585986/1‑150 (MQ=255) ttCTGCAGGAGTCCAGACTCCTGCGGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCt > 1:3349325/1‑150 (MQ=255) ttCTGCAGGAGTCCAGACTCCTGCGGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCt > 2:1003324/1‑150 (MQ=255) ttCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCt < 1:2971427/150‑1 (MQ=255) ttCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCt < 2:1412357/150‑1 (MQ=255) tctgCAGGAGTCCAGACTCCTGCGGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCt < 2:4606043/96‑1 (MQ=39) tctgCAGGAGTCCAGACTCCTGCGGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCt > 1:4606043/4‑99 (MQ=39) tgCAGGAGTCCAGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTa > 2:849872/2‑150 (MQ=255) cGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTa < 2:521328/150‑1 (MQ=255) gCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCACATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAg > 1:2376496/1‑150 (MQ=255) gCAGGAGTCCAGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAg > 2:1482251/1‑150 (MQ=255) cAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAgg > 1:3086201/1‑150 (MQ=255) tCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTtctc > 2:626884/1‑150 (MQ=255) tCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTtctc > 1:3000416/1‑150 (MQ=255) cTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTcc < 1:1289055/150‑1 (MQ=255) tGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCg > 2:1510047/1‑150 (MQ=255) tGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCg > 1:2706236/1‑150 (MQ=255) ggACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGc > 2:3254/1‑150 (MQ=255) ggACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGc < 1:5017879/150‑1 (MQ=255) ggACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGc > 1:2580578/1‑150 (MQ=255) ggACTCCTGCAGAAGCTGCAATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGc < 1:5017863/150‑1 (MQ=255) | CAAGATGGGAATGACGAGAATGGCGTCCCAGGCAGGAATTGAACCCTTATCTGGGGTGCCTCCTGCCTGATCAAGGTGCCGTGGTGCGGTATGCATCTGATTTTCCGTAGAGTAGTACTTCTTCGTAGAGTTGTTTTCCGCAGGAGTCTGGACTCCTGCAGAAGCTGCCATCTCAAGCGACTGCGTGCTCTGGCTGTGTTAACAGCTCCCATCCTTGCGCCGCTCCCTAGGTTCTGTACGAAATCCCGAGAAACTGAATCGACGCCCCTCGGGAGCTGAAATTCTGTAGGGTTCTCCGC > NC_002947/5002562‑5002860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |