| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,081,099 | T→A | 10.2% | intergenic (‑374/+23) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,081,099 | 0 | T | A | 10.2% | 512.6 / 40.3 | 177 | intergenic (‑374/+23) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base T (70/89); new base A (9/9); total (79/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.69e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
CTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTT > NC_002947/5080950‑5081247 | cTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTAtt < 2:3696294/150‑1 (MQ=255) aTCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGa < 2:1894319/150‑1 (MQ=255) aGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCg < 1:4209993/150‑1 (MQ=255) gTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCgg > 2:1772002/1‑150 (MQ=255) gTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCgg < 2:3815709/150‑1 (MQ=255) gacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCtt > 1:1644517/1‑150 (MQ=255) gacgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCtt > 2:113686/1‑150 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttt > 2:430592/1‑150 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttt < 2:1808315/150‑1 (MQ=255) cgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCtttt > 1:834067/1‑150 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttttt < 2:2722806/150‑1 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGCttttt < 1:914517/150‑1 (MQ=255) ttgttgTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGCTTTTTgt < 1:3777658/150‑2 (MQ=255) tgttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGCTTTTTgtt < 2:774836/150‑3 (MQ=255) gttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATg < 2:3390974/150‑1 (MQ=255) gttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATg < 2:4035624/150‑1 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCATCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCAGCTCTATTGAGCGGGCTTTTTGATgt < 2:578256/150‑2 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATgg > 2:4739412/1‑150 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATgg > 1:1141354/1‑150 (MQ=255) ttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATgg > 1:3881920/1‑150 (MQ=255) tgtgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATggg < 1:4363269/150‑1 (MQ=255) gATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAGTAGAGCGGGCttttt < 2:651171/140‑1 (MQ=255) gATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGCttttt > 1:651175/1‑140 (MQ=255) gggAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGc < 1:1097081/150‑1 (MQ=255) aaaGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGa < 1:3905388/150‑1 (MQ=255) gCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTc > 1:3229482/1‑150 (MQ=255) cacaTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCTCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTca < 2:1287263/150‑1 (MQ=255) caTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagc < 1:5313721/150‑1 (MQ=255) aTTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagca < 1:3380862/150‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagcag > 1:4155209/1‑150 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagcag > 1:2654368/1‑150 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCACTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTcagcag > 1:5289111/1‑150 (MQ=255) ttGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCAATAGAGCGGGc < 2:526172/120‑1 (MQ=255) gATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGAt < 1:2951114/150‑1 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTc < 1:4747438/150‑1 (MQ=255) ttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCg > 1:1068320/1‑150 (MQ=255) tttggagCCGCTGAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGa > 1:4728152/7‑150 (MQ=255) tttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGa < 1:1772002/150‑1 (MQ=255) ttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGaa < 1:1940842/150‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGc > 1:4053120/1‑150 (MQ=255) cGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCg > 1:4378719/1‑150 (MQ=255) aaaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGG‑TTCGAATCCTGctga > 1:4572528/1‑134 (MQ=255) aaaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGG‑TTCGAATCCTGctga < 2:4572528/137‑4 (MQ=255) cTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGcc < 1:2089747/150‑1 (MQ=255) acacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGa < 1:4108415/150‑1 (MQ=255) cacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTc < 2:1287872/141‑1 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTAc > 2:81395/1‑150 (MQ=255) cAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCCCAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTActc > 1:2491481/1‑150 (MQ=255) cAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGt < 1:2380807/138‑1 (MQ=255) tCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTAt > 2:4612233/1‑150 (MQ=255) cATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGAGGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATc > 2:2816363/1‑150 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCg < 1:3455575/73‑1 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCg > 2:3455575/1‑73 (MQ=255) gCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 2:4934834/150‑1 (MQ=255) gCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 1:4807354/150‑1 (MQ=255) gTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa > 1:1947982/1‑150 (MQ=255) gTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa < 2:5334808/150‑1 (MQ=255) gTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa < 2:4155209/150‑1 (MQ=255) aTCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGa < 2:3820296/90‑1 (MQ=255) aTCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTcc < 2:4213232/150‑1 (MQ=255) cGACAGGCTCAAGATTTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGt < 1:430592/150‑1 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGa < 2:4031015/150‑1 (MQ=255) aGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑Tg < 1:2027391/150‑1 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTa < 2:2321001/133‑1 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTa > 1:2321001/1‑133 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGtcg > 2:4725922/1‑148 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAg > 2:4270583/1‑150 (MQ=255) tCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGA‑ttggca > 1:3398752/1‑145 (MQ=255) cAAGACTTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCTTAGCCGAGTACTCTATCCAGCAGAGCTATGACTCCGCGA‑TGGtcag > 2:4053689/1‑147 (MQ=25) cAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGt > 1:3306126/1‑150 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGtt < 2:4181824/150‑1 (MQ=255) aaTTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTa < 2:925280/150‑1 (MQ=255) ttGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAg < 1:1453925/150‑1 (MQ=255) tGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGGGA‑TGGTAGTTTTAGACCAgg > 1:3240833/1‑150 (MQ=255) ggCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGt < 1:483129/150‑1 (MQ=255) gcACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTAc > 2:3000707/1‑150 (MQ=255) cccatcaaaAAGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCa > 2:3644031/6‑150 (MQ=255) acaaacaaATAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCa > 2:2230849/1‑150 (MQ=255) acaaacaaAATGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTGCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGGGA‑TGGTAGGTTTAGACCCGGTTACCa > 2:184958/1‑150 (MQ=25) acaaacaaAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGGTTTAGAACCGGATACCa > 2:3953458/1‑150 (MQ=255) ccatcaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGa > 2:5382265/5‑125 (MQ=255) ccatcaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGa < 1:5382265/121‑1 (MQ=255) acaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTgg < 2:4432370/150‑1 (MQ=255) aaaatGCCCGCTCAATAGAGCGGGCTTTTTGCTGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTCTGAGTCCGTGA‑GGGTAGTTTTAGACCAGGTTACCACTGGCt > 1:3035849/1‑150 (MQ=21) aaaGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTa > 2:1543759/1‑150 (MQ=255) ccGCTCAATAGAGCGGGCTTTTTGTTGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGaa < 1:5007433/150‑1 (MQ=255) cGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGaaa < 2:133382/150‑1 (MQ=255) cGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGaaa < 2:2397233/150‑1 (MQ=255) tctTTTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTTTTAAACCa < 1:2441078/126‑1 (MQ=14) tctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATgg < 1:4270583/150‑1 (MQ=255) tctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGAGA‑TGGTAGGTTTAGACCAGGATAACACAGGCTTCCATAAATgg > 2:3376245/1‑150 (MQ=18) ctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGc < 2:2698689/150‑1 (MQ=255) ctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGc < 2:2848173/150‑1 (MQ=255) atATTCAGCTGTCTTTTTGATGGGGTATGGCGGACTCAGCATGATTCGAA‑CCTGCGACCGCTCGGATCTTAGCCGAGTACTATATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATTGc < 2:2931332/149‑1 (MQ=18) tATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGAGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCt > 2:4517399/1‑150 (MQ=255) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt > 1:2634832/1‑88 (MQ=255) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt < 2:2634832/88‑1 (MQ=255) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCttt > 1:5176422/1‑150 (MQ=255) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCttt < 2:3881920/150‑1 (MQ=255) ttGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCttt < 2:1141354/150‑1 (MQ=255) | CTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGA‑TGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTT > NC_002947/5080950‑5081247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |