| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,164,578 | C→T | 10.8% | intergenic (+131/+70) | PP_4544 → / ← PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,164,578 | 0 | C | T | 10.8% | 196.8 / 12.8 | 77 | intergenic (+131/+70) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Reads supporting (aligned to +/- strand): ref base C (28/37); new base T (2/6); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.71e-01 | |||||||||||
GGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCA > NC_002947/5164432‑5164727 | ggAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCtt < 2:2476546/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 1:125489/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 2:638814/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 2:1184390/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 2:1184362/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 1:4939439/150‑1 (MQ=255) gCCAAGTTCTAAGCAACACCCTGCTCCGCTTCACCTCAACCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCATCAATTTGACTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTgaga < 2:2298588/150‑1 (MQ=255) ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGTAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGaa < 1:1497173/150‑1 (MQ=255) ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGaa < 2:1454774/150‑1 (MQ=255) ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGaa < 1:4135542/150‑1 (MQ=255) cAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGTAAACGCCGCCCCCATCCGGGGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAAc < 1:1182344/150‑1 (MQ=255) ttCTAAGCAACACCCTGCTCTGCTTCACCTGAAGGGGTAAACGCCGACCCCACCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACtgtg < 1:2743343/150‑1 (MQ=255) aaGCAACACCCTGCTCTGCTTCACCTGAAGCGGTAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGt < 1:2499833/150‑1 (MQ=255) cacCCTGCTCTGCTTCACCTGAAGCGGTAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑tgt < 1:178015/150‑1 (MQ=255) acCCTGCTGTGCTTCACCTGAAGCGGGAACCGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑tgtg < 2:242534/150‑1 (MQ=255) acCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCATTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑tgtg < 2:224708/150‑1 (MQ=255) ctgctctgctTCACCTGAAGGGTTAAAGGCCTCCCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGa < 1:3695994/150‑1 (MQ=38) gctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGc < 2:2048522/150‑1 (MQ=18) gctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGc < 2:2048733/150‑1 (MQ=18) gctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGc < 1:4913790/150‑1 (MQ=18) tctgctTCACCTGACGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGCgg < 1:4599766/150‑1 (MQ=17) tctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCgg < 1:2675459/150‑1 (MQ=255) tctgctACACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGCgg < 1:4612367/150‑1 (MQ=17) ttCACCTGAAGCGGGAACCGCCGACCCCCTCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTGGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAg < 2:1088606/150‑1 (MQ=255) cACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGcc < 2:3324716/150‑1 (MQ=255) cTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGCGGGCAAGCCcgc < 2:2954478/150‑1 (MQ=17) gggAAACGCCGACCCCAGCCGGCGTGTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCTTGCCcgctcccaca < 2:2955875/150‑8 (MQ=37) aaaCGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTTAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACACACCTTga > 1:3009846/1‑104 (MQ=255) aaaCGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTga < 2:3009846/104‑1 (MQ=255) gACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCGCCCACACT‑ATAACCACAGAACGTGAGGACGGGGGTGTCCC‑TGTGGGAGCGGGCCAGCCCGCGACGAGGGCGTAACAgg > 2:3049097/1‑150 (MQ=255) aTCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGAACTTGAGAACAGTTCTGTAAC‑AGTTGGAGCGGGCAAGCCCCCGAAGAGGCCGTAACAGGCGCCtg > 2:4881667/1‑150 (MQ=39) cgggCGTTTCCCGCTTATTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGGTTGCCCGCTCCCACTGT‑ATCACCACAGACCTTGAGAAGTGTGCGTTACC‑TGTGGGAGGGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgat < 2:2534438/148‑1 (MQ=37) ccGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTGCCCCCGCCCCCAGG‑AAAAACAAAGAACGTTATAACAGTTCTGGTCC‑TGTGGGGGCGGGCAAGCCCGCGAAGCGGCCGTGAACGGCGccggca > 2:767789/1‑146 (MQ=255) ccGGCGTTTCCCGCTTCTTTTGGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgat < 2:820848/150‑1 (MQ=255) gTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTGCCCCCTCCCACACG‑ATAACCCCACACCATGAGAACAGTTCTGTAAC‑AGTGGGTGCCGGCAACCCCCCCAAGAGGCCCGGACACGCGCCGGATGaaaa > 2:282831/1‑148 (MQ=255) cctcttcttTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCACCCACACT‑ATGACCACAAACCTTGAGAACAGTGCTGTACC‑GGTGGGCGCGGGCAAGCCCCCGAACAGGCCGGAAAAGGCGCCTGAGGAATAAgcgc > 2:337657/4‑150 (MQ=255) ccGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTTCCCGCGCCCACACT‑ATCACCACACACCATGAGAACTGTGCTGTAAC‑GGTGGGAGCGGGCCAGCCCGCGAAGAGGCCGGAACAGGCGCCGGATGGAACAgcgc > 2:5275017/1‑150 (MQ=255) ccGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑AGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGAACACGCGCCGGATGaaaaaccgc > 2:336919/1‑143 (MQ=37) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTTCCCCCGCCCACAGT‑ATCACCACAGACCGTGAGAACTGTGCTGTACC‑AGTGGGAGCCGGCAAGCCCGCGCAGAGGCCGGAACAGGCGCCAGATGAATAAccgcgt > 2:394798/1‑148 (MQ=255) ctacttTTTGACTGTGTCAAATGCGCCGCCCCCTTCGCGGGATTGCCCCCACCCACACT‑AACACCACACACCTTTAGAACTGTGCTTTACC‑TGTGGCAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTg < 2:74309/147‑1 (MQ=37) ttttGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTACCACAGG‑GTAACCCCAGAAAATGTGAACTGTGCGGTTCC‑GGGGGGAGCGGGCCAGCCCCCGGAGATGCCGGAAAAGGCGCCAGATGAAACAGCGCGGGCGCAg > 2:2661309/1‑150 (MQ=255) tttGCCTGTGTTAAAGGCGCCGGCCCCTTCGGGGGCTTGCCCGCTCCCCCAGT‑ACCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGCCGCGGCCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGa < 1:1609363/150‑1 (MQ=255) tGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCCCCCACCTT‑ATCACCACAGACCTTGTGAAGTGTGCTGTACC‑TGTGGGAGCGGGAAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAAt < 2:1581539/150‑1 (MQ=39) tgtgtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCCCCCACAGT‑ATCACCACCTCCCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATcaca < 1:872019/150‑1 (MQ=255) gtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTa < 2:4944011/150‑1 (MQ=255) aTGCGCCGGCCCCTTCGCGGGCGTGCCCGCTCCCACAGT‑ATCACCCCCCTCCGTGCGCCCGGTGCTGTGCC‑GGTGGGCGCGGGCAACCCCCCGAAGAGGCCGTCAACGGCGCCGGATGACTCAGCGCGGGCGCCGAAGCACCCGAcccct > 2:3581729/1‑147 (MQ=255) tGCGCCGGCCCCTTCGCGGGCTGCCCCGCTCCCACAGT‑AACACCACACACCTTGAGAACTGTGCGCTCCC‑GGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATc < 1:4881667/150‑1 (MQ=37) ggCCCCGGCGCGGGGTGCCCCGC‑CCCACAATAACCACAACCTACTTTGAGACCTGTGC‑GTCCCGTGTGGCGGGGGCCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATAc < 1:2329215/150‑1 (MQ=255) ccTTGGGGGGGTGGCCCGCCCCCACAGT‑AACACCACTTACTTTTAAATTTTGGCTTTCCC‑TGTGGGGGGGGGCACCCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCg < 1:3658250/150‑1 (MQ=255) cTTCGCGGGCTTGCCCCCTCCCACAGT‑ATAAACACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCCCGAAGAGGCCGTAACAGGCGCCAGATTAAACACCGCTTTCGCAGAATCAAACAAACAATAGAATAACCCGc > 2:4737297/1‑150 (MQ=25) gggggggTTGCCCGCACCCCCATT‑AACACCACTGACATTTATAAGTGTGCTGTCCC‑GGTGGGCGGGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCAcc < 1:1603034/147‑1 (MQ=255) gcgGGCTTGCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGTTAC‑TGTGGGAGCGGGCAAG‑CCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAAAACCCCGCACCaa > 1:4520055/1‑150 (MQ=17) ggCTTGCCGGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TTTGGGTGGGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAAc < 1:822363/150‑1 (MQ=255) gCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACg > 2:711754/1‑150 (MQ=255) ttGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg > 2:1741924/1‑150 (MQ=255) gtGCCGGCTCCCACTGT‑ATCACCACAGACGTTGTGAAGTGTGGTGTACG‑TGTGGGTGCGGGAATGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg < 2:1442797/149‑1 (MQ=255) gCCCGCTCCCACAGG‑TACAGCACAGTTCTCAAGGTCTGTGGTGATAC‑TGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCt > 1:3791594/1‑150 (MQ=17) cccGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc > 2:3161660/1‑150 (MQ=255) ccGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 1:5105678/1‑150 (MQ=255) ccGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 1:962518/1‑150 (MQ=255) gCTCCCTCAGT‑ATCACCACTGACCTTGAGAAGTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac < 2:4912793/150‑1 (MQ=255) ccACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc > 2:3611681/1‑150 (MQ=255) ccACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc > 2:2170438/1‑150 (MQ=255) ccACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc > 2:798358/1‑150 (MQ=255) ccACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc > 1:3558237/1‑150 (MQ=255) cacaGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc > 1:2072868/1‑150 (MQ=255) cacaGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc > 1:902629/1‑150 (MQ=255) acaGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc > 2:3486274/1‑150 (MQ=255) acaGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc > 1:4331470/1‑150 (MQ=255) acaGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc > 1:2451145/1‑150 (MQ=255) tCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg > 1:2647475/1‑150 (MQ=255) ccacAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCt > 1:3416680/1‑150 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAAc > 2:1571198/1‑143 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAAc < 1:1571198/143‑1 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt > 1:5260068/1‑150 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt > 1:5186162/1‑150 (MQ=255) cacaGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCtt > 1:4366316/1‑150 (MQ=255) gcccTTGCGACGTGTGCTGTCCC‑TGTGGGCGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGc < 1:2087593/148‑1 (MQ=255) ccTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCa > 2:3334486/1‑150 (MQ=255) | GGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGT‑ATCACCACAGACCTTGAGAACTGTGCTGTACC‑TGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCA > NC_002947/5164432‑5164727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |