| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,228,623 | T→A | 6.6% | intergenic (+15/+15) | PP_4605 → / ← PP_4606 | AraC family transcriptional regulator/ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,228,623 | 0 | T | A | 6.6% | 635.8 / 22.7 | 194 | intergenic (+15/+15) | PP_4605/PP_4606 | AraC family transcriptional regulator/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base T (83/98); new base A (5/8); total (88/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 199 total aligned reads displayed.
CGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGTGTTC > NC_002947/5228477‑5228772 | tGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGccc > 2:3981810/1‑150 (MQ=255) tGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTGTCATCTGAAACCGGGGCCGCAGAGCGGccc < 2:3218995/150‑1 (MQ=255) gggAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGcccc > 1:787713/1‑150 (MQ=255) gggAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCAGAGCGGcccc < 2:4027735/150‑1 (MQ=255) ggAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCa > 1:2667150/1‑150 (MQ=255) aTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGcc > 2:4735222/1‑150 (MQ=255) aTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCAGTTGcc > 1:3247047/1‑150 (MQ=255) aTGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTAGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCAGAGCGGccccggtttca < 2:4190516/150‑8 (MQ=255) gCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTa > 1:222639/1‑150 (MQ=255) ccGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTaa < 1:3493105/150‑1 (MQ=255) agagaTTGCCTTTTTGTGCGGGTTTGACATTGCCAGCCATTTCATCAACCTGTTTATCCAAGCCCTGGGGGCCTCACCTTGCGAATACCGCAAGGCCTTTTTCATCTTAATGCGGGTCCTCTCTGCGGCCCCTTTTGCCTAAATCTCgta < 2:1110718/150‑3 (MQ=255) gagaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAg < 1:361728/150‑1 (MQ=255) gaTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATGTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGt < 1:2931635/150‑1 (MQ=255) aTTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTGTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTg < 2:3128694/150‑1 (MQ=255) tGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCt > 2:1447293/1‑150 (MQ=255) tGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCt < 1:2980794/150‑1 (MQ=255) gCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc < 1:1969684/150‑1 (MQ=255) gCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc < 1:2416207/150‑1 (MQ=255) gCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc < 2:4961861/150‑1 (MQ=255) gCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc < 1:1413956/150‑1 (MQ=255) cTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGa > 1:2187046/1‑150 (MQ=255) tATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACa > 2:1424522/1‑150 (MQ=255) tATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACa > 2:5450510/1‑150 (MQ=255) tgtgCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAAc < 1:5410810/150‑1 (MQ=255) tgtgCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTGCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTGTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAAc < 1:3018357/150‑1 (MQ=255) tgccagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCcg < 2:2351288/150‑1 (MQ=255) gccagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCcgc < 1:1239549/150‑1 (MQ=255) ccagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGTGGCCCCATTTGCCTAAAACTCG‑AGGTGCTCGACAAACTGACCTGc > 2:3232578/1‑145 (MQ=255) cagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCAttt < 2:3711653/109‑1 (MQ=255) cagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCAttt > 1:3711653/1‑109 (MQ=255) cagtgccagCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCgcgc < 2:746150/150‑1 (MQ=255) tgccagCCATTTCAGCAACCGGTGTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatc < 2:1192211/150‑1 (MQ=255) gccagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcg < 1:1530107/150‑1 (MQ=255) ccagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgc > 1:4477956/1‑150 (MQ=255) cagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc < 1:5392532/124‑1 (MQ=255) cagccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTc > 2:5392532/1‑124 (MQ=255) agccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgcca > 1:1003138/1‑150 (MQ=255) gccaTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaa > 2:1716224/1‑150 (MQ=255) caTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatc < 2:2736519/150‑1 (MQ=255) aTTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCctcgccaatcg > 1:5083189/1‑150 (MQ=255) aaCCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAg > 1:3786284/1‑150 (MQ=255) ccGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTa > 2:4681510/1‑150 (MQ=255) gTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTg > 1:1599342/1‑150 (MQ=255) ttCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGt < 2:1844496/150‑1 (MQ=255) gCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCa > 1:4276432/1‑150 (MQ=255) ccAAGCCCTGGGGGCCACACCTGGCGACTACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAc > 2:3355537/1‑150 (MQ=255) ccAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAc < 1:1799947/150‑1 (MQ=255) ccAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAc < 2:2660402/150‑1 (MQ=255) cAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCAcc > 1:5232748/1‑150 (MQ=255) ccTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCACTCGCCACAAAGTACTGGTTCACCGCCGa > 1:1016519/1‑150 (MQ=255) ccTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGa < 1:2779529/150‑1 (MQ=255) ccTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGa < 1:4487095/150‑1 (MQ=255) ccTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCAACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGa < 1:399339/150‑1 (MQ=255) tGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGCCAAACTGACCTGCCGCGCATCGCCACTCGCCACACAGTACGGGTGCACCGCCGAGc > 2:4072029/1‑150 (MQ=255) tGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGc > 1:3326614/1‑150 (MQ=255) tGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGc > 2:1974957/1‑150 (MQ=255) ggggCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTg < 2:3856790/150‑1 (MQ=255) gCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTaa < 2:446897/150‑1 (MQ=255) gCCACACCTGGCGAATACCGCAACGCCTATTTCAACTGAAACCGGGGCCGCTCTGCGGCCCCAATTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTCCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGACCTGTaa < 2:872786/150‑1 (MQ=255) acCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc > 1:3224691/1‑114 (MQ=255) ccTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc < 1:4607550/113‑1 (MQ=255) ccTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc > 2:4607550/1‑113 (MQ=255) tGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCtt > 1:4398230/1‑150 (MQ=255) gCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCatcgccaatcgc > 2:2957835/1‑109 (MQ=255) naaTACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCg > 1:2913061/2‑150 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAgg > 1:4046716/1‑150 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAgg > 1:4102959/1‑150 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAgg < 1:2674383/150‑1 (MQ=255) cGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAgg > 1:2109970/1‑150 (MQ=255) aaGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttc < 1:4947777/150‑1 (MQ=255) aaGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttc < 1:4107417/150‑1 (MQ=255) ggCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttctt > 2:120591/1‑150 (MQ=255) gacTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCcac > 1:3881932/3‑98 (MQ=255) gacTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCcac < 2:3881932/96‑1 (MQ=255) gCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 2:2679288/150‑1 (MQ=255) gCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 2:1401869/150‑1 (MQ=255) gCCTTGTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGttcttc < 2:3450769/150‑1 (MQ=255) cTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCAc > 1:664809/1‑150 (MQ=255) cTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCAc > 2:1317804/1‑150 (MQ=255) tttttCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACg > 2:1271486/1‑150 (MQ=255) tCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCa < 1:707440/150‑1 (MQ=255) tCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCa < 2:5316431/150‑1 (MQ=255) aTCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGt < 1:120591/150‑1 (MQ=255) tCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAAACGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGtt > 1:25513/1‑150 (MQ=255) tGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACa < 2:2926737/130‑1 (MQ=255) tGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGc < 2:1352957/150‑1 (MQ=255) tGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAAATGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGc > 1:3937933/1‑150 (MQ=255) gcaaatggggCCGCAGAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCa > 2:404268/7‑150 (MQ=255) gAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCa < 2:5142969/150‑1 (MQ=255) gAAACCGGGGCCGCTCAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCa < 1:3932992/150‑1 (MQ=255) aaatggggCCGCAGAGCGGCCCCGTTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTg > 2:2021914/5‑92 (MQ=38) aaatggggCCGCAGAGCGGCCCCGTTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTg < 1:2021914/88‑1 (MQ=38) aaatggggCCGCAGAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAgg > 1:4965952/5‑150 (MQ=255) atggggCCGCAGAGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGgcg > 1:5135589/3‑150 (MQ=255) gggCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCAc < 2:5059153/150‑1 (MQ=255) gCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACaaa < 2:4263802/76‑1 (MQ=255) gCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTtgt < 1:1447293/150‑1 (MQ=255) ctGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGTGtt > 2:3330210/1‑150 (MQ=255) tGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGTGTtc < 2:2187046/150‑1 (MQ=255) tGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGTGTtc < 2:2118045/150‑1 (MQ=255) | CGGCTGGGAGTAATGCCGCTGGGAGAGATTGCCTTATTGTGCGGGTTTGCCAGTGCCAGCCATTTCAGCAACCGGTTTCGCCAAGCCCTGGGGGCCACACCTGGCGAATACCGCAAGGCCTTTTTCATCTGAAACCGGGGCCGCTCTGCGGCCCCATTTGCCTAAAACTCGAAGGTGCTCGACAAACTGACCTGCCGCGCATCGCCAATCGCCACAAAGTACTGGTTCACCGCCGAGCTGTAATACACCTTGTCGAACAGGTTCTTCACGTTCAGTTGCAGGCGCACGTTGTGTTC > NC_002947/5228477‑5228772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |