| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,276,006 | C→A | 6.5% | intergenic (+58/+48) | rlmG → / ← PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,276,006 | 0 | C | A | 6.5% | 502.7 / 2.5 | 159 | intergenic (+58/+48) | rlmG/PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (83/62); new base A (2/12); total (85/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
TGGGCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAA > NC_002947/5275857‑5276153 | tGGGCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGcc > 2:3089902/1‑150 (MQ=255)tGGGCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGcc < 2:1834748/150‑1 (MQ=255)tGGGCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGcc > 1:811465/1‑150 (MQ=255) gggCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCa > 1:2667456/1‑150 (MQ=255) gggCTATCACAGCAAGCTGCCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCAATCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTCTGCCa > 2:5001517/1‑150 (MQ=255) gCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATc < 1:4836977/150‑1 (MQ=255) tATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTa < 1:43060/150‑1 (MQ=255) tCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAgc > 1:1016218/1‑150 (MQ=255) tCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAgc > 1:1015867/1‑150 (MQ=255) acaGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAgcgc < 2:958168/150‑1 (MQ=255) acaGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAgcgc < 2:4503294/150‑1 (MQ=255) gCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGtt < 2:3163296/150‑1 (MQ=255) cAAGCTGGCGCGGTTGTTCAGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTg > 2:3687317/1‑150 (MQ=255) gCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCTCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCt < 2:2637137/150‑1 (MQ=255) gCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCt > 2:1944038/1‑150 (MQ=255) gCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCt > 2:3142959/1‑150 (MQ=255) gCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCt > 2:2778761/1‑150 (MQ=255) cTGGCGCGGGTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTg > 2:2278774/1‑150 (MQ=255) tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGccggt < 2:3433154/150‑4 (MQ=255) tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTgt < 1:757130/150‑2 (MQ=255) tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGc < 1:4476585/150‑1 (MQ=255) tGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGc < 1:4439966/150‑1 (MQ=255) ggCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCt > 2:2869540/1‑150 (MQ=255) gcgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCCCGAACACCGGCAA‑CGCCTGTGCCATCTAGCCCGTTGCCTGCTTCg > 1:2732396/1‑150 (MQ=255) cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt < 1:5234293/150‑1 (MQ=255) cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt < 1:882763/150‑1 (MQ=255) cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt < 1:3448785/150‑1 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 2:1768863/150‑1 (MQ=255) tgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 2:3909317‑M1/89‑150 (MQ=255) tgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 1:2874642‑M1/89‑150 (MQ=255) gttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg < 1:144789/150‑1 (MQ=255) gttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 1:197112/1‑150 (MQ=255) ttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTggg > 1:2964139/1‑150 (MQ=255) ttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCaa < 1:1623788/150‑1 (MQ=255) ttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCaa < 2:250861/150‑1 (MQ=255) ttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCaa < 1:3065252/150‑1 (MQ=255) cGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑Gcc > 2:3576853/1‑150 (MQ=255) ggggggTTGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑Gccc < 1:3597510/150‑1 (MQ=255) ggggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑Gccc > 2:4203608/1‑150 (MQ=255) ggggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑Gccc < 1:4899776/150‑1 (MQ=255) ggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGc > 1:902850/1‑150 (MQ=255) ggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCtc < 1:2782859/150‑2 (MQ=255) gCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGctc > 2:502812/1‑150 (MQ=255) cAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGtt < 2:2536380/118‑1 (MQ=255) gTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCAGTGCCAACTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGcgcgtag > 1:4102526/1‑144 (MQ=255) gcggcAACGCCCAAGTTCGTCTTTCTGAATCCCCGAATGTTGGGGCGCCACCGCCCCCTTTGGTGCGGGCTTGCCCGCTAAAACCGGCAA‑CGCGTTTGCAATCTCGGGGGTTGCCTGCTTGGTGGGCAC‑GCCCGCTGCCGCTCTTTATCa < 2:1686884/150‑1 (MQ=255) gcggcAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCa > 1:1740027/1‑150 (MQ=255) gcggaAACGCCCACTTTCGTCTTTCTGAACGCCCGCAAGTCGGCGCGCCACCGCCCCCTTCGGAGGGGGCTGGCCGGCTAACACGGGCAA‑CGCCTGTGCAATCTCGCGCGTTGCCTGATTGGTGGGAAA‑GCCCGCTGCCGCTCTTTATCa < 2:1735957/150‑1 (MQ=255) cccattttCGTAATTATTAAAGCCCGCAAGTCGGCGCGCCCCCCCCCCCGTCGGCGGGGGGTTGCCCGCTAACCCCGGAAA‑TGCCTTTGCCATCTAGCGGTTTGCCTGATTCGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGt < 2:4699457/144‑1 (MQ=255) cccAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCAGCGAACACCGGCAA‑CGCCTGTGCCATCTTGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGt < 2:4535414/150‑1 (MQ=255) aaGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAg > 2:548365/1‑150 (MQ=255) aaGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAg > 2:3142107/1‑150 (MQ=255) gTCATTCTGAAAGCCCGCAAGTTGGCGCGCCACCGCCCCCGTTGGCGCGGGCTGGCCCGCCAACACCGGAAA‑GGCGTGTGCAATCTCGCGGGTTGCCTGCTTCGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgc < 2:2835569/150‑1 (MQ=255) tCTGAACGCCCGAATTTCGGCGCGCCACCGCCCCGGTTGGAGGGGGCTTGCCCGCCAACACCGCAAA‑CGCCTTTGCAATCTCGCGCTTGGCCTGCTTCGTGGGCAA‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccc < 2:3833830/150‑1 (MQ=255) tCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccc > 2:1483912/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 2:3930962/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 1:349641/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 2:2135200/1‑150 (MQ=255) ggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 2:2329722‑M1/39‑100 (MQ=255) ggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg < 1:2329722‑M1/62‑1 (MQ=255) gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt < 1:3093055/97‑1 (MQ=255) gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt < 1:3093435/97‑1 (MQ=255) gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt > 2:3093435/1‑97 (MQ=255) cGCATGTAGGCGCGCCACCGCCCCCTTGGGCGGGGGTTGGCCCGCGACCACGGGCAA‑CGCCTGTGCATTCTCGCGGGTTGCCTGCTTCGTGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAg < 2:5179821/150‑1 (MQ=255) cGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGGCTGCTTCGTGGGCTA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAagag > 2:3790507/1‑150 (MQ=255) gCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGc > 1:3872596/1‑150 (MQ=255) aaGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCg > 1:3892293/1‑150 (MQ=255) gcgcgcCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcac > 1:3349403/1‑150 (MQ=255) cgcgcCACCGCCCCGGTTGGTGGGGGGGTGCCCGCTAACACGGGAAA‑CGCGTTTGCATTCTTGCGGGTTGCCTGCTGCGGGGGCAC‑GCCGGCTGCCGCTCTTTATCAGTGTGTTGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcaca < 2:3256312/150‑1 (MQ=255) gcgcCCCCGCCCCGGTTGGTGGGGGTTTGCCCGCTAACACCGGCAA‑CGCCTGTGCCATCTCGGGGTTGGCCTGCTGGGTGGCCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcacac < 2:1549235/150‑1 (MQ=255) gcgcCACCGCCCGGTTTGGAGGGTGTTTGCCGGGAACCACCGCAAA‑GGCCTTTGCAATCTGGCG‑TTTGGCTTTTTTGTTGGTAATGCCCGCTGCCGCTCTTTATCAGTGTGTGTTCAGGCCCGCCGCCCCCATGAACAGCCGCATcacac < 2:1549179/150‑1 (MQ=255) cccccccGCCCCGGTTGGGGCGGGCTTGCCCGCAACCACCGCCCC‑CGCGTGGGCCATCTCGCG‑GTTGGCGGGGTTGTTGGCAACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcacaca < 1:4764543/145‑1 (MQ=255) ccACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAgg > 1:2200071/1‑150 (MQ=255) cACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgc > 1:4034853/1‑150 (MQ=255) cGCCCCGGTTGGCGGGGGCTGCCCCGC‑TACACCCGCAACCGCTTGTGCAATCTCGGGGGTTGCGGGTTTGGGGGGAAC‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgccgc < 1:3224310/150‑1 (MQ=255) ccccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCcac > 1:4186862/1‑150 (MQ=255) cccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCGAGCGCGGTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCGTTATCAGTGTGGGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCcaca > 1:123032/1‑150 (MQ=255) ccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCacac > 2:1427885/1‑150 (MQ=255) tcggAGCGGCCTTCCCCGCCAACACCGCAAA‑CGCCTGTGCAAACTAGCGCTTCGCCTGCTTCTTGGCCAA‑CCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCa < 2:2432432/148‑1 (MQ=255) tggtGCGGGGTGGCCCGCGAACACCGGCAC‑GGCGTGTGCCTTCTAGGGCGTTGCGTGCTTGGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAg > 1:5364705‑M1/5‑150 (MQ=255) AGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAgcgc < 2:4234275‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCTAACACCGGAAA‑CGCCTGTGCAATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCt > 2:3713859‑M1/1‑150 (MQ=255) GGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGc < 1:3385206‑M1/150‑1 (MQ=255) gTTGCCCGCCAACACGGGAAA‑CGCGTGTGCAATCTCGCGCGTGGCCGGCTTCGGGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGAc > 2:2964139‑M1/2‑150 (MQ=255) TTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACg < 1:2130‑M1/150‑1 (MQ=255) CCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTc < 1:1189691‑M1/150‑1 (MQ=255) ccaaCACCGGAAA‑CGCCTGTGCCATCTCGCGGGTTGCCTGCTTCGTGGCAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCg < 2:197112/148‑1 (MQ=255) gAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTGTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGc > 2:1059064/1‑150 (MQ=255) gAACACCGCCAA‑CGCCTGTGCCATCTTGCGGGTTGCCTGCTTCGTGGGAAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGc < 2:1538893/150‑1 (MQ=255) aaCACCGGCAC‑CGGGTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGcc < 2:1339498/150‑1 (MQ=255) ccccGGAAC‑CGCGTGGGCCATCTTGGGCGTGGCCTGGTGCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa < 2:179823/148‑1 (MQ=255) cacCGGAAA‑CGCCTGTGCCATCTCGCGGGTGGCCTGCTTGGTGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa < 2:4117147/150‑1 (MQ=255) cGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt > 1:818218/1‑150 (MQ=255) cGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt > 1:23663/1‑150 (MQ=255) gCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑Gccc < 2:2175419/47‑1 (MQ=255) a‑CGCCTGTGCCTTCTCGCGGTTTGCCTGCTTCGTGGGCAC‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCa < 2:1826937/150‑1 (MQ=255) gCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAAc > 2:2938800/1‑150 (MQ=255) gCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAAc > 2:2630321/1‑150 (MQ=255) gCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAAc > 2:2095304/1‑150 (MQ=255) ccTGGGCCATCTAGCGCGTTGCCTGCTGCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACa < 2:3988147/150‑1 (MQ=255) | TGGGCTATCACAGCAAGCTGGCGCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTCTGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAA‑CGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAA‑GCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAA > NC_002947/5275857‑5276153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |