| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,293,215 | G→C | 5.9% | P281P (CCG→CCC) | PP_4664 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,293,215 | 0 | G | C | 5.9% | 611.4 / 19.1 | 184 | P281P (CCG→CCC) | PP_4664 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (82/91); new base C (5/6); total (87/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TGGTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGTGAC > NC_002947/5293067‑5293363 | gTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGc < 1:356643/150‑1 (MQ=255) gcgggcggGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTAt > 2:5124814/1‑150 (MQ=255) cgggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATg < 2:120749/150‑1 (MQ=255) gggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGc < 2:2502647/150‑1 (MQ=255) ggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGcc < 1:1343913/150‑1 (MQ=255) ggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGcc < 1:1758934/150‑1 (MQ=255) ggggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCa < 1:723595/150‑1 (MQ=255) ggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaa < 1:344887/150‑3 (MQ=255) gCCGGAATCGGGGTGGTGCCACTGGCAGCAGTCCAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGaa > 2:5031580/1‑150 (MQ=255) gCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGaa < 2:89345/150‑1 (MQ=255) ccGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAAc < 2:2275627/150‑1 (MQ=255) cGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACt > 2:4806100/1‑150 (MQ=255) gAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaaatccc < 1:3681056/150‑5 (MQ=255) aTCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTa < 2:3578041/150‑1 (MQ=255) aTCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTa < 2:657261/150‑1 (MQ=255) ggggTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGcc < 2:4871671/150‑1 (MQ=255) gggTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCa > 1:5056728/1‑150 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTa > 2:4432407/1‑150 (MQ=255) ccACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTAcc < 1:495954/150‑1 (MQ=255) cACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCg < 1:2650734/150‑1 (MQ=255) aCTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCgg > 1:2155267/1‑150 (MQ=255) tGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCt > 1:755395/1‑150 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGa < 1:1959837/150‑1 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCAAGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGa < 2:2831874/150‑1 (MQ=255) agcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcg > 2:1394453/1‑150 (MQ=255) agcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcg > 1:1158151/1‑150 (MQ=255) gcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcgc < 2:2669397/150‑1 (MQ=255) gTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCa > 1:2301829/1‑150 (MQ=255) tACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCaa < 1:671953/150‑1 (MQ=255) aCAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAg > 2:4341632/1‑150 (MQ=255) aGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAggg > 1:4648335/1‑150 (MQ=255) tGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGc > 1:2342051/1‑99 (MQ=255) aaGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcacca > 2:422887/1‑150 (MQ=255) aaGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcacca < 2:4173992/150‑1 (MQ=255) aGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcaccac > 2:4997186/1‑150 (MQ=255) ggCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACt > 2:3789819/1‑150 (MQ=255) gCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTg > 2:3405563/1‑150 (MQ=255) cATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGt < 1:4341677/150‑1 (MQ=255) tgctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCg < 1:554135/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:2390183/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:1606765/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa > 2:4376075/1‑150 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:5409031/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 2:1190727/150‑1 (MQ=255) ttGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAAc > 1:4147435/1‑150 (MQ=255) cACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGc < 2:5287468/150‑1 (MQ=255) gggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCACGGGCGCACACCACTGTCGAGGCAAACCGCCTGc > 1:388864/1‑150 (MQ=255) gggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGc < 1:2230632/150‑1 (MQ=255) ggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGt < 1:689666/90‑1 (MQ=255) ggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGt > 2:689666/1‑90 (MQ=255) ggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGcc < 2:1828285/150‑1 (MQ=255) gTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCa < 2:570267/150‑1 (MQ=255) ggCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATa < 1:3653105/150‑1 (MQ=255) gCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAGCTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAg > 1:772696/1‑150 (MQ=255) gCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGACATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAg < 1:4524189/150‑1 (MQ=255) cACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgc > 1:4399803/1‑150 (MQ=255) aCTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgcg > 2:3854427/1‑150 (MQ=255) aCTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgcg > 2:3021087/1‑150 (MQ=255) tGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGAGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGcgcg > 2:4287563/1‑150 (MQ=255) gCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCgg < 1:1623437/150‑1 (MQ=255) cAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCggg < 1:4432407/150‑1 (MQ=255) ggAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCa > 1:5331307/1‑150 (MQ=255) ggAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCa < 2:3199645/150‑1 (MQ=255) aGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGa < 2:182235/150‑1 (MQ=255) ccATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGaca < 2:5364732/150‑1 (MQ=255) ccATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGaca > 2:3136121/1‑150 (MQ=255) ccATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCACAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGaca > 2:2171985/1‑150 (MQ=255) aTGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGa > 2:4111921/1‑146 (MQ=255) aTGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGa < 1:4111921/146‑1 (MQ=255) aTGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACAcc > 1:2464428/1‑150 (MQ=255) gggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTg < 1:328661/150‑1 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTgg > 2:5107027/1‑150 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTgg < 1:3021087/150‑1 (MQ=255) ccAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCTGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGag > 2:4647687/1‑149 (MQ=255) ccAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGAc > 1:3233438/1‑150 (MQ=255) cAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACg > 1:168263/1‑150 (MQ=255) cAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCa > 1:425129/1‑58 (MQ=25) aaCCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGt > 1:2403330/1‑150 (MQ=255) aCCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCggg < 1:3173545/134‑1 (MQ=255) gccgGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAg < 2:5434325/150‑1 (MQ=255) ttGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAg < 2:537155/150‑1 (MQ=255) gCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGc > 1:3215154/1‑150 (MQ=255) tGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCaa > 2:4735451/1‑150 (MQ=255) gtgtGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTGGCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAAcg > 2:2640951/1‑149 (MQ=255) gcgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcgg > 1:3835680/1‑150 (MQ=255) cgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggc < 1:3136121/150‑1 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg < 2:3281718/150‑1 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg > 1:1426173/1‑150 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg > 2:809531/1‑150 (MQ=255) gggATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcggc > 2:1908295/1‑150 (MQ=255) gATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCg > 1:5114269/1‑150 (MQ=255) agttctGCGGCATAGCCCGGCAATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCg > 1:291383/6‑150 (MQ=255) tttGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTg < 1:1128304/150‑1 (MQ=255) ttGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGCCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTgg < 1:4582687/150‑1 (MQ=255) tGCGGCATAGCCCGGCAATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTggg > 2:2241734/1‑150 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGgcg < 2:2625443/63‑1 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGc < 2:4360537/150‑1 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGc < 2:831459/150‑1 (MQ=255) ggCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCt > 2:5212767/1‑150 (MQ=255) tGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGt < 2:755395/150‑1 (MQ=255) | TGGTCGCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGTGAC > NC_002947/5293067‑5293363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |