| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,293,219 | T→A | 6.0% | Y283N (TAT→AAT) | PP_4664 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,293,219 | 0 | T | A | 6.0% | 605.3 / 18.3 | 181 | Y283N (TAT→AAT) | PP_4664 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (81/89); new base A (5/6); total (86/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 181 total aligned reads displayed.
GCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGTGAC > NC_002947/5293072‑5293363 | gcgggcggGGGCTGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTAt < 2:4959929/150‑1 (MQ=255)gcgggcggGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTAt < 1:5413974/150‑1 (MQ=255) ggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGcc < 1:1343913/150‑1 (MQ=255) ggcgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGcc < 1:1758934/150‑1 (MQ=255) cgggGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGc < 2:2269011/150‑1 (MQ=255) ggggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCa < 1:723595/150‑1 (MQ=255) ggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGa > 1:619591/1‑150 (MQ=255) ggCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaa < 1:344887/150‑3 (MQ=255) gCCGGAATCGGGGTGGTGCCACTGGCAGCAGTCCAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGaa > 2:5031580/1‑150 (MQ=255) gCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGaa < 2:89345/150‑1 (MQ=255) ccGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAAc < 2:2275627/150‑1 (MQ=255) gAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCaaaatccc < 1:3681056/150‑5 (MQ=255) aTCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTa < 2:3578041/150‑1 (MQ=255) gtggtgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCAcc < 2:4364209/150‑1 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTa < 2:3676011/150‑1 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTa > 2:4140886/1‑150 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTa > 2:4432402/1‑150 (MQ=255) tgCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTa > 2:4432407/1‑150 (MQ=255) ccACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTAcc < 1:5033483/150‑1 (MQ=255) cACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCg < 1:2650734/150‑1 (MQ=255) aCTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCgg > 1:2155267/1‑150 (MQ=255) cTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGc < 1:680295/150‑1 (MQ=255) tGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCt > 1:755395/1‑150 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGa < 1:1959837/150‑1 (MQ=255) gcagcaGTACAGCGCTGGCAAGGCAAGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGa < 2:2831874/150‑1 (MQ=255) agcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcg > 1:1158151/1‑150 (MQ=255) gcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcgc < 2:2511167/150‑1 (MQ=255) gcagTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGAcgc < 2:2669397/150‑1 (MQ=255) aCAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGACCTGGTAGCCACCTGTACCGGCTGTCGCGCCAg > 2:4341677/1‑150 (MQ=255) aCAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAg < 1:4140886/150‑1 (MQ=255) tGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGcac > 1:4589056/1‑150 (MQ=255) tGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGcac > 2:4811922/1‑150 (MQ=255) aaGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcacca > 1:2243791/1‑150 (MQ=255) aaGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcacca > 2:422887/1‑150 (MQ=255) aGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCAcaccac > 2:4997203/1‑150 (MQ=255) gCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTg > 2:3405563/1‑150 (MQ=255) cATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGt < 1:4341677/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:1606765/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:2390183/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 2:4324607/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 1:5409031/150‑1 (MQ=255) gctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGa < 2:1190888/150‑1 (MQ=255) ctgcCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAg < 1:4165301/150‑1 (MQ=255) ccGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCa > 2:5193571/1‑150 (MQ=255) ccGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCa > 1:3783359/1‑150 (MQ=255) tGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTg > 1:763234/1‑150 (MQ=255) gggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGc < 1:2230632/150‑1 (MQ=255) ggTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGt > 2:689666/1‑90 (MQ=255) gTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCa < 2:570267/150‑1 (MQ=255) ggCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATa < 2:185498/150‑1 (MQ=255) gCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACC‑TTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgc < 2:5338491/150‑1 (MQ=255) gCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGACATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAg < 1:4524189/150‑1 (MQ=255) cACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgc > 1:1655289/1‑150 (MQ=255) aCTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAgcg > 2:3021087/1‑150 (MQ=255) aCTGCAGGAGCCAGGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGAGTTTGCGGCATTGCCGGGCTCTGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCACACCGCCTGCCATAgcg > 2:3854375/1‑150 (MQ=255) tGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGcgcg < 1:3880873/150‑1 (MQ=255) gCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCgg < 1:1623437/150‑1 (MQ=255) cAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCggg < 1:4432402/150‑1 (MQ=255) ggAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCa > 1:5331307/1‑150 (MQ=255) aGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGa < 2:182235/150‑1 (MQ=255) aGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGa < 1:3225970/150‑1 (MQ=255) ccATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGaca < 2:5364732/150‑1 (MQ=255) cATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGacac < 1:4806100/150‑1 (MQ=255) cATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGacac > 1:2325630/1‑150 (MQ=255) gggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTg < 1:328661/150‑1 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTgg < 2:2082110/150‑1 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTgg > 2:5107027/1‑150 (MQ=255) ggCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTgg < 1:3021087/150‑1 (MQ=255) ccAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCTGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGag > 2:4647687/1‑149 (MQ=255) ccAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGAc > 1:3233438/1‑150 (MQ=255) cAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCa > 1:425129/1‑58 (MQ=25) cAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATAGCCCGGCAATGCCGCa < 2:425129/58‑1 (MQ=25) aaCCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGt > 1:2417735/1‑150 (MQ=255) aCCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCggg > 2:3173545/1‑134 (MQ=255) aCCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCggg < 1:3173545/134‑1 (MQ=255) gccgGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTAc < 2:4079173/73‑1 (MQ=255) gccgGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTAc > 1:4079173/1‑73 (MQ=255) gccgGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAg < 2:5434325/150‑1 (MQ=255) gTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCa < 1:3651606/150‑1 (MQ=255) ttGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAg < 2:537155/150‑1 (MQ=255) ttGCTGGTGTGCGCACGGGATTTTGCGGCAGTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAg < 2:5238742/150‑1 (MQ=255) tGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCac > 2:4735490/1‑149 (MQ=255) gtgtGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTGGCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAAcg > 2:2640951/1‑149 (MQ=255) tgCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcg > 2:144947/1‑150 (MQ=255) cgcACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggc < 1:3136121/150‑1 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg > 2:3109278/1‑150 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg > 2:809531/1‑150 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg > 1:1426173/1‑150 (MQ=255) aCGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTgcggcgcg < 2:3281718/150‑1 (MQ=255) cGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGc < 2:2197056/137‑1 (MQ=255) gATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCg > 1:5114269/1‑150 (MQ=255) agttctGCGGCATAGCCCGGCAATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCg > 1:291383/6‑150 (MQ=255) tttGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTg < 1:1128304/150‑1 (MQ=255) ttGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTgg < 2:685579/150‑1 (MQ=255) ttGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGCCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTgg < 1:4582687/150‑1 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGgcg > 1:2625443/1‑63 (MQ=255) gCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGc < 2:831459/150‑1 (MQ=255) ggCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCt > 2:1354050/1‑150 (MQ=255) ggCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCt > 1:855562/1‑150 (MQ=255) tGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGt < 2:755395/150‑1 (MQ=255) | GCGGGCGGGGCCGGAATCGGGGTGGTGCCACTGGCAGCAGTACAGCGCTGGCAAGGCATGCTGCCGTTGCACTGGGTGGCACTGCAGGAGCCATGGGCCAACCGCCGGTTGCTGGTGTGCGCACGGGATTTTGCGGCATTGCCGGGCTATGCCGCAGAACTGGTAGCCACCTTTACCGGCTGACGCGCAAGGGCGCACACCACTGTCGAGGCAAACCGCCTGCCATAGCGCGGGCAGACACCTGGACGTCGAGCCCAGGCAACTGCGGCGCGGCCGTTGGGCCTATGGTGAC > NC_002947/5293072‑5293363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |