| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,315,249 | C→G | 9.5% | intergenic (‑598/+116) | PP_16SG ← / ← msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,315,249 | 0 | C | G | 9.5% | 437.8 / 28.6 | 137 | intergenic (‑598/+116) | PP_16SG/msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (56/68); new base G (6/7); total (62/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
TCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCCGC > NC_002947/5315101‑5315392 | tCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCcgcg > 1:2159018/1‑150 (MQ=255) gCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCcgcgcg < 2:2323537/150‑1 (MQ=255) cTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCgcgg < 2:2563262/150‑1 (MQ=255) tGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCTGCGGCTATGAGATCGAGCGCCGCCCGCgcggg > 1:4353332/1‑149 (MQ=255) tGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCgcggc > 1:229511/1‑150 (MQ=255) aaGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCt < 1:3179907/150‑1 (MQ=255) aaGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCt < 2:5299725/150‑1 (MQ=255) tGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATTGAGCGCCGCGCGGGCGGCGCTCGa < 2:1323040/150‑1 (MQ=255) ggggCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGAt < 1:3367757/150‑1 (MQ=255) ggCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGAtct > 2:474007/1‑150 (MQ=255) gcgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGAtctc > 2:2169805/1‑150 (MQ=255) gcgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGAtctc < 2:827179/150‑1 (MQ=255) cgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTca < 2:4429254/150‑1 (MQ=255) cATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTcaca < 2:5177003/150‑1 (MQ=255) ataAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACg > 2:3264489/1‑150 (MQ=255) taAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGc > 1:819016/1‑150 (MQ=255) taAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGc > 1:330270/1‑150 (MQ=255) aGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCa > 2:2276883/1‑150 (MQ=255) gggATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCcga > 1:5200533/1‑150 (MQ=255) gggATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCaga > 1:3570695/1‑150 (MQ=255) gggATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCaga > 2:5152073/1‑150 (MQ=255) gggATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCaga < 2:2798667/150‑1 (MQ=255) gATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGGCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAgaga > 1:3102529/1‑150 (MQ=255) agagGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACaaa < 2:1163769/150‑1 (MQ=255) agagGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACaaa < 2:336262/150‑1 (MQ=255) gagGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAg < 2:2551037/150‑1 (MQ=255) ggCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCg < 2:177237/150‑1 (MQ=255) ggCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCg < 1:2301391/150‑1 (MQ=255) ggCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCg < 2:177304/150‑1 (MQ=255) cGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCggg < 2:379427/150‑1 (MQ=255) gTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAACCAAAGGCGGGc > 2:2641160/1‑150 (MQ=255) gTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAACCAAAGGCGGGc > 2:2641068/1‑150 (MQ=255) gTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGc > 1:4259803/1‑150 (MQ=255) aaCCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCct < 1:1025571/150‑1 (MQ=255) ccTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCctct < 2:1606285/150‑1 (MQ=255) cTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCtctc < 2:5176355/150‑1 (MQ=255) tttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCGGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTcc > 1:27535/1‑150 (MQ=255) tttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGaaa < 1:4221862/132‑1 (MQ=255) tttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGc < 1:3022668/143‑1 (MQ=255) ttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGGCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCca < 2:3102529/150‑1 (MQ=255) tAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCcac < 1:492259/150‑1 (MQ=255) aTTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAg > 2:4382258/1‑150 (MQ=255) tttCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCt > 1:1379307/1‑104 (MQ=255) tttCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCt < 2:1379307/104‑1 (MQ=255) ttCAACAAAGTTAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTACAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGcc < 1:1006990/150‑1 (MQ=255) tCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCAGGCCCTCTCCACAGCCa > 1:62747/1‑150 (MQ=255) tCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCAGGCCCTCTCCACAGCCa > 1:62138/1‑150 (MQ=255) tCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCAGGCCCTCTCCACAGCCa > 1:61963/1‑150 (MQ=255) aacaaaGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCAtt < 1:3877498/147‑1 (MQ=255) aaGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCGCGGGCGGCGCt > 2:1382831/1‑100 (MQ=255) aaGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCAtt < 1:3851395/150‑1 (MQ=255) aaGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCAtt < 2:3821729/150‑1 (MQ=255) aaaGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCt < 2:4997707/150‑1 (MQ=255) aGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTAt < 1:955301/150‑1 (MQ=255) aGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTAt < 1:5188411/150‑1 (MQ=255) gTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCGGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTAtc < 2:27535/150‑1 (MQ=255) tataAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGa < 1:1697358/150‑1 (MQ=255) ggggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGc > 2:5055585/1‑113 (MQ=255) gggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGTGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAAGAATGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGAGAGGcc > 2:3439315/1‑150 (MQ=255) ggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGccc < 1:1466180/150‑1 (MQ=255) ggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGccc > 2:143301/1‑150 (MQ=255) aaaTACTGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCtt < 1:5058032/150‑1 (MQ=255) aaaTACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCAGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCtt < 2:62138/150‑1 (MQ=255) aaaTACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCAGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCtt < 2:61963/150‑1 (MQ=255) aaTACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTg < 1:4859849/150‑1 (MQ=255) tACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGc > 2:4875741/1‑150 (MQ=255) aCCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCa < 2:4433761/150‑1 (MQ=255) gggCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccaccc > 2:1723558/1‑150 (MQ=255) cAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACtctc > 2:19081/1‑150 (MQ=255) aaGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCa > 2:4115780/1‑150 (MQ=255) gtgtTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCaaa < 2:2036588/150‑1 (MQ=255) gtTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAAcc < 2:5291929/150‑1 (MQ=255) ttCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCa < 1:860479/112‑1 (MQ=255) aacaGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTAccc > 2:2957903/1‑150 (MQ=255) aacaGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTAccc < 2:2781333/150‑1 (MQ=255) aGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGc < 1:2034136/150‑1 (MQ=255) tttCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTGGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTa > 2:2913049/1‑150 (MQ=255) tggcgtCTGTGAGATCGAGCGCCGCGCGGGCGGCGCGCGATCTCACAGACGCCAGAGAAACAAACGCGGGCCCGCTCCACAGCCCATGCTATCTCAAGACAGGCCCTTGGCCGCCCCCCCCCACGCACAAACCGCCCTACCCAGCTACCt > 2:4212499/3‑150 (MQ=25) cAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCt < 2:1557284/150‑1 (MQ=255) aGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTg > 2:3060414/1‑150 (MQ=255) tGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCtt < 2:3651441/150‑1 (MQ=255) gagaTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCACGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTg < 1:474007/150‑1 (MQ=255) cgaTCGAGCGCCGCGCGGGCGGCGCCCCATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTTTCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTgg < 1:3064883/149‑1 (MQ=255) agaTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTgg < 1:111935/150‑1 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCt < 1:1016052/136‑1 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGaa > 1:971042/1‑150 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGaa < 1:5092291/150‑1 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCATAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccacc < 2:4300262/104‑1 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCATAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccacc < 2:4300228/104‑1 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCATAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccacc > 1:4300262/1‑104 (MQ=255) gAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgc < 2:3088118/150‑1 (MQ=255) gAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgc < 2:819016/150‑1 (MQ=255) aGCGCCGCGCGGGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgcg > 1:3808654/1‑150 (MQ=255) aGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgcg > 1:3568805/1‑150 (MQ=255) aGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCACAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgcg > 2:110610/1‑150 (MQ=255) gcgcCGCCCGCGCGGCGCTCGATCTCCCAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgcgc > 2:2990750/1‑150 (MQ=255) gcgcCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgcgc > 2:2990823/1‑150 (MQ=255) gccgccCGCGCAGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGccc < 2:3572919/150‑1 (MQ=255) cgcgcggGCGGCGCTCGATCTCATAGGCGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCcgc > 1:1998805/1‑150 (MQ=255) cgcccgcGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCcgc < 2:2159018/150‑1 (MQ=255) | TCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCCGC > NC_002947/5315101‑5315392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |