| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,318,380 | C→T | 8.8% | E230E (GAG→GAA) | ilvC ← | ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,318,380 | 0 | C | T | 8.8% | 459.7 / 24.8 | 159 | E230E (GAG→GAA) | ilvC | ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (73/71); new base T (8/6); total (81/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
GCTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGT > NC_002947/5318232‑5318529 | gcTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGAtcagcttcagct > 2:2705454/1‑150 (MQ=255) cTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTc < 2:2413936/150‑1 (MQ=255) ttCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCg > 2:3487039/1‑150 (MQ=255) ttCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCg > 2:3011980/1‑150 (MQ=255) gCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAgg < 1:1766784/150‑1 (MQ=255) cATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGc > 2:2045342/1‑150 (MQ=255) ttGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCAc > 2:2757706/1‑150 (MQ=255) ttGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCAc > 2:2500454/1‑150 (MQ=255) ttGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCAc < 2:509644/150‑1 (MQ=255) aTGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAg > 1:2114364/1‑150 (MQ=255) gCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGTTCGTGCAGGCACTCGAAGTAg < 1:4324803/150‑1 (MQ=255) gCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCAt > 2:91738/1‑150 (MQ=255) ttcttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCgg < 1:1469641/150‑1 (MQ=255) ttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGgcgc > 1:3279630/1‑150 (MQ=255) tcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGcgcg > 2:2767457/1‑150 (MQ=255) gTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATATCCGGcgcgaa > 1:116588/1‑148 (MQ=255) tgatgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGc > 2:4634147/1‑150 (MQ=255) gatgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGcc > 2:183896/1‑150 (MQ=255) gatgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGcc < 2:4790944/150‑1 (MQ=255) tgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAg > 2:2010160/1‑150 (MQ=255) gaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGc > 2:3238623/1‑150 (MQ=255) atgcgcGGACCAGTGACGTATTCGTCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCt > 2:1970114/6‑150 (MQ=255) cTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCtt < 2:3961974/150‑1 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc > 2:1335845/1‑150 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc > 2:4154795/1‑150 (MQ=255) gcgcGGACCAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTc < 1:3806661/147‑1 (MQ=255) cGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGAc < 1:3569508/150‑1 (MQ=255) ggCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCa > 1:3091523/1‑150 (MQ=255) gCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAg > 2:4598804/1‑150 (MQ=255) gCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAg < 1:4669129/150‑1 (MQ=255) ccAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAgg < 2:3022230/150‑1 (MQ=255) aGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGt < 2:2425867/150‑1 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 1:5040463/150‑1 (MQ=255) aCGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCg > 1:914674/1‑150 (MQ=255) gTACTCACCGTATTCGGCGTCGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGaa > 1:921290/1‑150 (MQ=255) cACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCgg > 2:5187505/1‑150 (MQ=255) cccGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 2:976972/2‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 2:1679591/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGACATCGAGTAGTTCATGTAGGCGAAGCCGCCTTCGTACATGAGGTCTACCATCAGCATCAGCACGTGCAGGCACACGAAGTAGGCCAAATCCGGCCCGTAGCCAGCTTCGACCAGCGTTTCGAAACCGGc > 1:928939/1‑150 (MQ=255) ccGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTc < 2:707455/83‑1 (MQ=255) ccGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTc > 1:707455/1‑83 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt > 1:2713580/1‑150 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt > 1:2990578/1‑150 (MQ=255) gcataccgCGTCGTTGGAGAGCGAGCACCGCCTGTTGGCGAAGCCGCCCACGCCCATGAGGTCGACGATCAGCGTCAGCTCGTGCAGGCACGCCAAGAAGGCCAGTTCCGTCGCGTAGCCAGCTTCGACCAGGGTATCGAAACCGGCttt < 2:3577818/143‑1 (MQ=255) aTTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGATCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGa < 2:3675935/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 1:2844013/150‑1 (MQ=255) gCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGc < 1:4390429/150‑1 (MQ=255) ttgttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCg > 1:4945226/1‑150 (MQ=255) gttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGCTCAGCTTCAGCACGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGAc < 2:1185388/150‑1 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCa > 2:1185384/1‑106 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCa < 1:1185384/106‑1 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGt > 1:2276987/1‑150 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGt < 1:1206385/150‑1 (MQ=255) gaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTAcc > 2:3058779/1‑150 (MQ=255) gAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:3819437/1‑150 (MQ=255) gAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:5173927/1‑150 (MQ=255) gAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:2873147/1‑150 (MQ=255) gtagtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCcaca > 1:112899/1‑150 (MQ=255) gtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAg > 2:4997096/1‑150 (MQ=255) ttCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGa > 1:2329956/1‑150 (MQ=255) aTGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACa < 2:116588/150‑1 (MQ=255) tGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAg > 2:1217649/1‑150 (MQ=255) gTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGc < 2:616787/150‑1 (MQ=255) gTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGc < 1:1612041/150‑1 (MQ=255) gTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGc < 1:3111522/150‑1 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:1821262/1‑138 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca < 1:1821262/138‑1 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGcc > 1:1071164/1‑150 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGcc < 1:3487039/150‑1 (MQ=255) ggCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTg < 2:2112033/150‑1 (MQ=255) cGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCt < 1:4598804/150‑1 (MQ=255) cGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCt > 2:484813/1‑150 (MQ=255) gccTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGaa > 1:176049/1‑150 (MQ=255) ttCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAg < 1:1316464/150‑1 (MQ=255) ttCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAg < 1:3378309/150‑1 (MQ=255) ttCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAg > 2:4332755/1‑150 (MQ=255) tCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAgg > 1:1568816/1‑150 (MQ=255) gTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtc < 1:3085549/150‑1 (MQ=255) tagatcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTG‑TGCGACTGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtca > 2:2376439/7‑149 (MQ=255) atcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAgg < 1:3545579/141‑1 (MQ=255) atcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAgg > 2:3545579/4‑144 (MQ=255) caGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtttc < 2:2398123/149‑1 (MQ=255) aGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtttcg > 2:4724473/1‑150 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 1:2010160/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:5365406/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:1888686/150‑1 (MQ=255) gTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggt < 1:1731064/150‑1 (MQ=255) tCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggtt > 2:723549/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCCGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAAc < 2:5272556/117‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGACCAGCCTGCTCACCGAACAGGTCggtttcggtttc < 2:3279630/150‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAAc > 1:5272556/1‑117 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc > 2:4448685/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc < 1:250249/150‑1 (MQ=255) gATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTc > 1:4247407/1‑150 (MQ=255) tcagcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCt > 1:2589816/1‑150 (MQ=255) gcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGa < 1:3058779/150‑1 (MQ=255) cagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGCACAGGTCGGTTTCGGTTTCGTCCTTGAAggt < 2:2030001/150‑1 (MQ=255) cagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggt < 1:978477/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGATACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACCGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:3091606/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:156972/150‑1 (MQ=255) | GCTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGT > NC_002947/5318232‑5318529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |