| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,318,440 | G→A | 9.2% | F210F (TTC→TTT) | ilvC ← | ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,318,440 | 0 | G | A | 9.2% | 535.8 / 32.0 | 185 | F210F (TTC→TTT) | ilvC | ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base G (87/81); new base A (13/4); total (100/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 189 total aligned reads displayed.
ACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGACGTTCTT > NC_002947/5318291‑5318589 | cACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCgg > 2:5187505/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 2:1679591/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 1:929090/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGACATCGAGTAGTTCATGTAGGCGAAGCCGCCTTCGTACATGAGGTCTACCATCAGCATCAGCACGTGCAGGCACACGAAGTAGGCCAAATCCGGCCCGTAGCCAGCTTCGACCAGCGTTTCGAAACCGGc > 1:928939/1‑150 (MQ=255) ccGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCt < 2:2869922/150‑1 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt < 2:2197815/150‑1 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt > 1:2990578/1‑150 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt > 1:2713580/1‑150 (MQ=255) gcataccgCGTCGTTGGAGAGCGAGCACCGCCTGTTGGCGAAGCCGCCCACGCCCATGAGGTCGACGATCAGCGTCAGCTCGTGCAGGCACGCCAAGAAGGCCAGTTCCGTCGCGTAGCCAGCTTCGACCAGGGTATCGAAACCGGCttt < 2:3577818/143‑1 (MQ=255) aTTCGGCGTTGTTGGAGATCGAGTTGTTCTTGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGa < 2:192685/150‑1 (MQ=255) aTTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGATCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGa < 2:3675935/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc > 2:1247356/1‑150 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 1:2844013/150‑1 (MQ=255) tCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc‑c < 2:2492468/150‑1 (MQ=255) tCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGAACAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc‑c < 2:930441/150‑1 (MQ=255) ggCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCCGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAg > 1:3123344/1‑150 (MQ=255) gCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTACGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGc > 2:618358/1‑150 (MQ=255) gttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGCTCAGCTTCAGCACGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGAc < 2:1185388/150‑1 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGt > 1:2276987/1‑150 (MQ=255) gaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTAcc < 1:982093/150‑1 (MQ=255) gAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:5173927/1‑150 (MQ=255) gtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAg > 2:4997096/1‑150 (MQ=255) ttCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGa > 2:3487380/1‑150 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGaa < 1:1139063/150‑1 (MQ=255) cATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAAc > 2:3027973/1‑150 (MQ=255) aTGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACa < 1:1546770/150‑1 (MQ=255) aTGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACa < 2:116588/150‑1 (MQ=255) gTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGc < 1:1612041/150‑1 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCca > 2:1821262/1‑138 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGcc > 1:1071164/1‑150 (MQ=255) ttGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGcc < 1:3487039/150‑1 (MQ=255) ggCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTg < 2:2112033/150‑1 (MQ=255) cGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCt > 2:484813/1‑150 (MQ=255) cGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCt < 1:4598804/150‑1 (MQ=255) gATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTc > 2:8404/1‑150 (MQ=255) gccTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGaa > 1:176049/1‑150 (MQ=255) gccTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTGGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGaa < 1:4378368/150‑1 (MQ=255) ttCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAg < 1:3378309/150‑1 (MQ=255) ttCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAg > 2:4332755/1‑150 (MQ=255) cGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGt < 1:3823723/150‑1 (MQ=255) cGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGt < 1:3095211/150‑1 (MQ=255) tagatcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTG‑TGCGACTGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtca > 2:2376439/7‑149 (MQ=255) atcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAgg < 1:3545579/141‑1 (MQ=255) atcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACCCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtt > 2:3392950/4‑150 (MQ=255) caGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtttc < 2:2398123/149‑1 (MQ=255) aGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtttcg > 2:4724473/1‑150 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:5365406/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTACGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:5090922/150‑1 (MQ=255) gTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagtttcgca > 2:1449409/1‑148 (MQ=255) gTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggt < 1:91738/150‑1 (MQ=255) gTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggt < 1:1731064/150‑1 (MQ=255) tCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggtt > 2:2969845/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCCGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAAc < 2:5272556/117‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGACCAGCCTGCTCACCGAACAGGTCggtttcggtttc < 2:3279630/150‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAAc > 1:5272556/1‑117 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc > 2:4448685/1‑150 (MQ=255) gATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTc > 1:4247407/1‑150 (MQ=255) tcagcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCt > 1:2589816/1‑150 (MQ=255) gcttcatttCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGa > 2:3812120/1‑150 (MQ=255) gcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGa < 1:3058779/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGATACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACCGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:3091606/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:156972/150‑1 (MQ=255) ctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtggt > 2:5445438/1‑150 (MQ=255) gCAGGCTCTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCga < 2:2059458/150‑1 (MQ=255) gCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCga < 1:2767457/150‑1 (MQ=255) cAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCgat > 1:1825654/1‑150 (MQ=255) gCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCgatgat > 2:2420655/1‑150 (MQ=255) tCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:5171685/117‑1 (MQ=255) tCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg > 1:5171685/1‑117 (MQ=255) tCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCg > 2:745997/1‑150 (MQ=255) tCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAAT‑GAGTTCAACAACGCCACCGCACAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAGGTGGTTTCaataacgccc > 2:2851002/1‑143 (MQ=255) aGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTAc < 1:1976677/150‑1 (MQ=255) aGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTAc < 2:2692975/150‑1 (MQ=255) gCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGcca > 1:1914530/1‑150 (MQ=255) ccATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccac > 2:2023005/1‑150 (MQ=255) ccATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccac < 2:3091523/150‑1 (MQ=255) cATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccacc > 2:4330766/1‑150 (MQ=255) cATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccacc > 1:1326425/1‑150 (MQ=255) aTTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccacca > 1:4300867/1‑150 (MQ=255) tttCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcgg < 2:4528768/105‑1 (MQ=255) gcgTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGccc < 1:2045342/150‑1 (MQ=255) tAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGaa < 2:2713580/150‑1 (MQ=255) tAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGaa < 2:178253/150‑1 (MQ=255) ccAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCa > 1:3219769/1‑150 (MQ=255) cAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCAt < 1:1206640/150‑1 (MQ=255) cAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCAt > 1:2508607/1‑150 (MQ=255) aGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATa > 1:4359984/1‑150 (MQ=255) gCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtg > 1:3369438/1‑105 (MQ=255) gCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAg < 1:2500454/150‑1 (MQ=255) gCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAg < 1:1637485/150‑1 (MQ=255) cTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAgg > 1:4451517/1‑150 (MQ=255) aCCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGt > 2:2550095/1‑150 (MQ=255) aCCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGt < 1:1247356/150‑1 (MQ=255) ccAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTg > 1:857086/1‑58 (MQ=255) cAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGc > 2:4995417/1‑150 (MQ=255) gggTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCGTAGGACAGTGCGa > 1:251592/1‑150 (MQ=255) gggTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGa > 1:2423158/1‑150 (MQ=255) tttCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGACGt > 2:3729820/1‑150 (MQ=255) tttCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGACGt > 1:1053168/1‑150 (MQ=255) gAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGACGTTCtt > 1:4781587/1‑150 (MQ=255) | ACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAC‑CAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTACGCCCGAAGCATAGGACAGTGCGACGTTCTT > NC_002947/5318291‑5318589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |