| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,334,215 | C→G | 6.9% | intergenic (+28/‑21) | dksA → / → gluQ | RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,334,215 | 0 | C | G | 6.9% | 623.8 / 26.7 | 189 | intergenic (+28/‑21) | dksA/gluQ | RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase |
| Reads supporting (aligned to +/- strand): ref base C (94/82); new base G (8/5); total (102/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GTGCGAGTCGTGCGGCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTCAACGGC > NC_002947/5334067‑5334364 | gTGCGAGTCGTGCGGCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGcatca > 2:2610910/1‑150 (MQ=255) aGTCGTGCGGCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATgcgc < 2:2289201/150‑1 (MQ=255) tGCGGCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATGATGCGCCCCGt < 2:5230603/150‑1 (MQ=255) ggCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTc < 1:1012164/150‑1 (MQ=255) aTCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCAtt > 1:538099/1‑150 (MQ=255) aTCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCAtt > 2:269238/1‑150 (MQ=255) aTCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCAtt > 1:3263991/1‑150 (MQ=255) tCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCAttt < 2:3305196/150‑1 (MQ=255) gagaTCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTtat < 1:4774758/150‑1 (MQ=255) aTCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATg > 1:2209388/1‑150 (MQ=255) aTCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATg > 1:2525777/1‑150 (MQ=255) gCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCa < 1:3305126/150‑1 (MQ=255) gCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCa < 1:2389066/150‑1 (MQ=255) cTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGc < 2:2447785/150‑1 (MQ=255) cTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGc < 2:4275416/150‑1 (MQ=255) gccgccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGa > 1:3964573/1‑150 (MQ=255) gccgccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGa < 2:3716884/150‑1 (MQ=255) gccgccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGa < 2:3762639/150‑1 (MQ=255) ccgccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGAc < 2:2126782/150‑1 (MQ=255) ccgccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGAc < 2:3278428/150‑1 (MQ=255) ccTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCAt > 1:2780936/1‑150 (MQ=255) cTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATg > 1:5189768/1‑150 (MQ=255) ggAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGAc < 1:4565697/150‑1 (MQ=255) gAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTCCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGAcc < 2:4155183/150‑1 (MQ=255) gcccgcccTACCGCCGACCTGTGCTTCGAGTGCAAGGAATTTGCCGAGAAAAAGGAAAATACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGAc < 2:4200371/150‑1 (MQ=255) cccgcccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACt > 1:4716422/1‑150 (MQ=255) cgcccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATGATGCGCCCCGt > 2:144070/1‑114 (MQ=255) cccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAg < 1:4702568/150‑1 (MQ=255) cccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAg < 2:2106532/150‑1 (MQ=255) ccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGc < 2:907985/150‑1 (MQ=255) ccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGc > 1:4451714/1‑150 (MQ=255) ccTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGc < 2:2047500/150‑1 (MQ=255) cTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCt < 2:2780936/150‑1 (MQ=255) aCCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTAc < 1:4845966/150‑1 (MQ=255) cgccgACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGcccc < 2:3277469/104‑1 (MQ=255) cgccgACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACAt > 1:1595902/1‑150 (MQ=255) cgccgACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACAt > 2:1203856/1‑150 (MQ=255) cgACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCgg < 1:3748229/150‑1 (MQ=255) cgACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCgg < 1:1006524/150‑1 (MQ=255) tgtgCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACAGCGGGCGCt > 2:4785589/1‑150 (MQ=255) cTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGc > 2:5189071/1‑150 (MQ=255) cTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGc < 1:1103462/150‑1 (MQ=255) ttCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcc > 2:4468721/1‑150 (MQ=255) ttCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcc < 2:4476876/150‑1 (MQ=255) ttCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcc > 2:172933/1‑150 (MQ=255) tCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGccc < 2:1930058/150‑1 (MQ=255) tCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGGTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGccc > 2:4274016/1‑150 (MQ=255) gACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGccccc > 1:4488245/1‑150 (MQ=255) aCTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGccccca > 1:2448603/1‑150 (MQ=255) tGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcccccacc < 1:3530060/150‑1 (MQ=255) tGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcccccacc > 1:1686800/1‑150 (MQ=255) aaGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcccccaccccc > 2:948351/1‑150 (MQ=255) aaGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcccccaccccc > 1:402407/1‑150 (MQ=255) aGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGcccccaccccca > 2:968265/1‑150 (MQ=255) gCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTc < 2:4769833/150‑1 (MQ=255) gCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTc < 2:2852656/150‑1 (MQ=255) cGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCt > 1:5432044/1‑150 (MQ=255) gagaAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGAc < 1:1487267/101‑1 (MQ=255) gagaAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTg > 1:3991393/1‑150 (MQ=255) gaAAAAGGAAACAACGGTCGGCACAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCa < 1:3138873/150‑1 (MQ=255) aacaaGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGCACGGGGCGCTTCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCAc < 1:2859903/147‑1 (MQ=255) aaGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTc < 2:3563717/150‑1 (MQ=255) aaGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTc < 1:372937/150‑1 (MQ=255) aGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCg < 1:232758/150‑1 (MQ=255) ggAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCgg > 1:2636668/1‑150 (MQ=255) gAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGc > 2:2323279/1‑150 (MQ=255) gAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGc > 2:3127034/1‑150 (MQ=255) gAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGc > 2:1488307/1‑150 (MQ=255) aaaaaaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCt > 2:3744449/1‑150 (MQ=255) aaaaaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGa < 1:3284733/83‑1 (MQ=255) aaaaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCg > 2:2688690/1‑150 (MQ=255) aaaaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCg > 1:2045297/1‑150 (MQ=255) aaaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGc < 2:4486047/150‑1 (MQ=255) aaCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCt > 1:891749/1‑150 (MQ=255) aCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTg < 1:1280589/150‑1 (MQ=255) aCGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTg < 1:3636544/150‑1 (MQ=255) ggCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTcgcc > 2:641648/1‑150 (MQ=255) gCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTcgccg > 2:3449164/1‑150 (MQ=255) gCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCg > 1:2309612/1‑150 (MQ=255) gCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCg > 2:503491/1‑150 (MQ=255) ctttcttCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGcctcct < 2:3689625/150‑1 (MQ=255) tttcttCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTg > 1:41424/1‑150 (MQ=255) ttcttcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTgg > 1:1371295/1‑150 (MQ=255) ttcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTc < 2:1686800/150‑1 (MQ=255) ttcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTc > 1:760493/1‑150 (MQ=255) ttcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTc < 1:1638675/150‑1 (MQ=255) ttcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTc > 2:4961609/1‑150 (MQ=255) tcCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCg > 1:43932/1‑150 (MQ=255) cACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGc > 2:1957636/1‑137 (MQ=255) cACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGc < 1:1957636/137‑1 (MQ=255) tGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGccc < 1:228493/150‑1 (MQ=255) aaaCGGGGCGCATGATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGc > 1:3560877/2‑81 (MQ=255) aaCGGGGCGCATGATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCa > 2:3974986/1‑104 (MQ=255) aaCGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCcgc > 1:155211/1‑150 (MQ=255) aaCGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGACcgc > 1:4965590/1‑150 (MQ=255) cGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCgcgc < 2:760493/150‑1 (MQ=255) gcgcATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTc > 2:504990/1‑150 (MQ=255) gcgcATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTc > 1:446188/1‑150 (MQ=255) cgcATGATGCGCCCCGTTTCATTTATATGCACAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTCa > 1:609068/1‑150 (MQ=255) catGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTCAACGGc < 1:3625238/150‑1 (MQ=255) | GTGCGAGTCGTGCGGCATCGAGATCGGCCTGCGCCGCCTGGAAGCCCGCCCTACCGCCGACCTGTGCTTCGACTGCAAGGAAATTGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCATCATGCGCCCCGTTTCATTTATATGCCCAGCCTGACCATGACCGACTCCAGCTACATCGGGCGCTTCGCCCCCACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCCGCGCCGTCAACGGC > NC_002947/5334067‑5334364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |