| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,367,719 | C→A | 20.1% | M269I (ATG→ATT) ‡ | ftsH ← | integral membrane ATP‑dependent zinc metallopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,367,719 | 0 | C | A | 20.1% | 445.4 / 102.7 | 193 | M269I (ATG→ATT) ‡ | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
| Reads supporting (aligned to +/- strand): ref base C (82/72); new base A (19/20); total (101/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
GAAGCGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCGGAAATGGT > NC_002947/5367572‑5367868 | gAAGCGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCAt > 1:2563905/1‑150 (MQ=255)gAAGCGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCAt > 2:2486170/1‑150 (MQ=255)gAAGCGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCAt > 2:325701/1‑150 (MQ=255) cGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCg < 1:325627/150‑1 (MQ=255) cagcagCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATg < 1:1743729/150‑1 (MQ=255) agcagcGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATgg < 2:4617168/150‑1 (MQ=255) agcagcGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATgg < 2:4765863/150‑1 (MQ=255) gcAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCa > 1:3616270/1‑150 (MQ=255) gTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGc < 2:2901840/150‑1 (MQ=255) cGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGt < 1:3295055/150‑1 (MQ=255) gAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTc > 2:223517/1‑150 (MQ=255) gAGCACACCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTc > 2:4624576/1‑150 (MQ=255) cacaTCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGgc < 2:2640603/123‑1 (MQ=255) tCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTtcg < 1:1473948/150‑1 (MQ=255) gACGGTTGGTGGCGGCTATGACGATGATGCCATCATTCATCTCGAAGCCTTCCATCTCCACCAGCAACTTGTTGAGGGTTTTCTCACGCTCGTCGTGACCGCCGCCCATTCCGGCTCCACGATGGCGACCAACGGCGTCGATTTCGTCGa < 1:1149183/150‑1 (MQ=255) aCGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGAt < 2:4951853/150‑1 (MQ=255) aCGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGAt > 1:4229784/1‑150 (MQ=255) ggTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGa > 1:1259437/1‑150 (MQ=255) ttGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAg > 2:3249980/1‑150 (MQ=255) gcgATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCGAGTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCAc > 2:1077757/1‑150 (MQ=255) gatgacgatgaTGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACgg < 2:1090770/150‑1 (MQ=255) tgacgatgaTGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACgggg < 2:2585580/150‑1 (MQ=255) gCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGcttctt > 1:2122955/1‑150 (MQ=255) gCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGcttctt < 2:1498908/150‑1 (MQ=255) ccATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTg < 1:140041/150‑1 (MQ=255) catcatTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTgg > 1:2358133/1‑150 (MQ=255) atcatTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGc < 2:3930967/150‑1 (MQ=255) atcatTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGc < 2:4325222/150‑1 (MQ=255) atcatTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGc > 1:2751430/1‑150 (MQ=255) attcatCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTg > 1:1575992/1‑150 (MQ=255) attcatCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTg < 1:4352492/150‑1 (MQ=255) atCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCg > 2:751045/1‑150 (MQ=255) ctcGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGaa < 1:1590878/150‑1 (MQ=255) aaaccatCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATg > 1:830161/7‑150 (MQ=255) aaccatCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGt < 1:3450083/145‑1 (MQ=255) ccatCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTca < 1:391662/147‑2 (MQ=255) catCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcac < 1:585669/148‑3 (MQ=255) catCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcac < 2:2259156/148‑3 (MQ=255) atCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcacg > 1:2969049/2‑150 (MQ=255) atCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcacg > 2:366916/2‑150 (MQ=255) atCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcacg > 1:5042428/2‑150 (MQ=255) tCCATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAATATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcacgg > 1:3194783/1‑149 (MQ=255) ccATTTCGACCAGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTcacgga < 1:3095643/150‑3 (MQ=255) ccATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGca > 2:3505608/1‑150 (MQ=255) tttcgaccaGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGgacgc > 1:374883/6‑148 (MQ=255) ttcgaccaGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGAcgcg < 1:1116798/146‑1 (MQ=255) tcgaccaGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCgg < 1:1917845/147‑1 (MQ=255) tcCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGACCATGTCGCGCACACgg > 2:3383527/1‑150 (MQ=255) tcCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACgg > 2:2940415/1‑150 (MQ=255) gaccaGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCTGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTg < 1:4939635/120‑1 (MQ=255) gaccaGAAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCTGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTg > 2:4939635/2‑121 (MQ=255) caccaGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCt > 2:365940/1‑150 (MQ=255) caccaGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCt < 1:668045/150‑1 (MQ=255) caccaGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCt < 2:2098758/150‑1 (MQ=255) cagaagcTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCTAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGc > 1:410381/7‑150 (MQ=255) caGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGc < 2:2417946/150‑1 (MQ=255) agaagcTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCa < 1:3837570/145‑1 (MQ=255) aGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGACGCGCACACGGCTGGCa < 1:499561/150‑1 (MQ=255) gaagcTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCAc > 2:825789/5‑150 (MQ=255) cgctcTGGTTCAGCGTCTGGTCGCGTTCGTCGTTGCCGCCGCCCAGCCCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCAc < 2:5204631/146‑1 (MQ=255) aagcTGGTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCAcc < 1:2178079/147‑1 (MQ=255) aCTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGa < 2:3367626/150‑1 (MQ=255) aCTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGa > 1:474135/1‑150 (MQ=255) aCTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGa < 1:4984879/150‑1 (MQ=255) ggTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGacac > 1:1877979/1‑150 (MQ=255) gTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACAcc > 2:452025/1‑150 (MQ=255) gTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCCAGGCGCATTCTGCTTGGCCTGTTCGAGCATGTCACGGACGCGGCGTGCAcccgagcg > 1:5204631/1‑144 (MQ=255) gTTCAGCGTCTGTTCGCGTTCGTCGTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACAcc > 1:4868992/1‑150 (MQ=255) ttGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACAccc > 2:637096/1‑150 (MQ=255) gAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAgatgat > 1:1341336/1‑87 (MQ=255) gAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAgatgat < 2:1341336/87‑1 (MQ=255) tttGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACa > 2:4605649/1‑150 (MQ=255) ttGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACAt < 2:3278023/150‑1 (MQ=255) tGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACAtt < 2:116584/150‑1 (MQ=255) ttcgcgttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACACCGACAAACATTTc < 2:2960970/143‑1 (MQ=255) cTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCt > 1:927690/1‑126 (MQ=255) tcgcgttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACACCGACAAACATTTca < 1:761373/144‑2 (MQ=255) tCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTcc > 2:5380919/1‑150 (MQ=255) tCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTcc > 1:1677157/1‑150 (MQ=255) cgcgttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACACCGACAAACATTTcaa < 2:2828095/145‑3 (MQ=255) cACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCAcc > 2:4569623/1‑130 (MQ=255) cACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCa < 2:4190604/150‑1 (MQ=255) cACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCa < 1:3682972/150‑1 (MQ=255) gcgttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCAc < 2:303250/124‑1 (MQ=255) gcgttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCAc > 1:303250/5‑128 (MQ=255) aCGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCAAc > 2:4128347/1‑150 (MQ=255) gCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGa > 1:4609798/1‑150 (MQ=255) ttcgtcgTTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACACCGACAAACATTTCAACaaa < 1:1531178/149‑1 (MQ=255) cTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGaa < 2:3949227/150‑1 (MQ=255) cTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGaa < 2:1930744/150‑1 (MQ=255) gtcgtTGCCGCCGCCAAGACCGGCACCACGGTGGCGACCGACGGCGTCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACGCGGCTTGCACCAACACCGACAAACATTTCAACAAAGTc < 1:2783871/150‑1 (MQ=255) gtcgtGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTc > 2:1760281/1‑150 (MQ=255) tcgtGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATCATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGtaa < 2:3088046/150‑3 (MQ=255) tGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGaa < 1:4241960/150‑1 (MQ=255) ccgccgCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCg > 2:898381/1‑150 (MQ=255) ccgccgCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCg < 1:4438259/150‑1 (MQ=255) cgccgcCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCgg > 2:2169525/1‑150 (MQ=255) cgccgcCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCgg > 2:2186088/1‑150 (MQ=255) cgccgcCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGACGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCgg < 1:3994835/150‑1 (MQ=255) cccATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCGGAAATg > 2:2691911/1‑150 (MQ=255) | GAAGCGGCCGGGGCGCAGCAGCGCAGGGTCGAGCACATCCGGACGGTTGGTGGCGGCGATGACGATGATGCCATCATTCATCTCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTTTGCTCACGCTCGTCGTGACCGCCGCCCATGCCGGCGCCACGATGGCGACCAACGGCGTCGATTTCGTCGATGAAGATGATGCACGGGGCGTGCTTCTTGGCCTGCTCGAACATGTCGCGCACACGGCTGGCACCGACACCCACGAACATTTCCACGAAGTCCGAACCGGAAATGGT > NC_002947/5367572‑5367868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |