| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 355,221 | C→A | 6.9% | intergenic (‑47/+38) | cbcW ← / ← cbcX | choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 355,221 | 0 | C | A | 6.9% | 477.6 / 18.5 | 145 | intergenic (‑47/+38) | cbcW/cbcX | choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (68/67); new base A (3/7); total (71/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GCCTTGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTTG > NC_002947/355073‑355370 | gCCTTGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGggcaggca > 1:4043347/1‑150 (MQ=255)gCCTTGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGggcaggca < 2:4582500/150‑1 (MQ=255) tGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGt < 2:587378/150‑1 (MQ=255) tGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGt < 1:1770873/150‑1 (MQ=255) gcgcGTTGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTc < 1:4828941/150‑1 (MQ=255) gATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGc > 1:2885922/1‑150 (MQ=255) ggCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGcccc < 1:4627777/150‑1 (MQ=255) ggCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGcccc < 1:4627589/150‑1 (MQ=255) gCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCg < 1:1394908/150‑1 (MQ=255) cGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTGCCTGCCCCgg < 2:181080/150‑2 (MQ=255) cGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTGCCTGCCCCgg < 2:181224/150‑2 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCggg < 1:2100760/150‑3 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAg > 2:5217423/1‑150 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAg < 1:3750966/150‑1 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAg > 2:3753799/1‑150 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAg < 2:3901896/150‑1 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTGCCTGCCCCggg < 1:3252703/150‑3 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTGCCTGCCCCggg < 1:2692110/150‑3 (MQ=255) gAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATTGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTa < 2:4752661/150‑1 (MQ=255) gAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTa > 1:5077042/1‑150 (MQ=255) ttCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTAc < 1:3381225/150‑1 (MQ=255) ttCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTAc < 1:3381574/150‑1 (MQ=255) gcgcCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGc < 2:449595/150‑1 (MQ=255) gcCGTTCTGGGTCAGCCATTCGACGAACGACGCGAGGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGt < 1:3693216/150‑1 (MQ=255) tCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTc < 1:2102857/150‑1 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTAtt < 2:2953722/150‑1 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTAtt < 2:2953827/150‑1 (MQ=255) cAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTg < 2:3491449/150‑1 (MQ=255) cAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTg < 2:3491213/150‑1 (MQ=255) cAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTg < 2:3041420/150‑1 (MQ=255) cAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTg < 2:3041860/150‑1 (MQ=255) aGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGc > 1:5130099/1‑150 (MQ=255) gCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCg > 2:3958699/1‑150 (MQ=255) ccATGCGACGACCGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTGCCACCAGCAGAGATTGAAATCAACCCGCGGCAGGCACGGTCCTGCCCCCAGCTAGCGCTACTGCGTAGTGCGGTATTGCgg > 2:208587/1‑149 (MQ=255) ttCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAg > 1:1238384/1‑150 (MQ=255) cgacgaACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCt < 1:4517052/150‑1 (MQ=255) gacgaACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCtt > 2:3309826/1‑150 (MQ=255) gaacgaCGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGc > 2:3603679/1‑150 (MQ=255) gacgCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTg > 1:3084865/1‑150 (MQ=255) acgCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGa < 1:551801/150‑1 (MQ=255) cgcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc < 1:4955343/150‑1 (MQ=255) cgcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc < 1:3309826/150‑1 (MQ=255) cgcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc < 1:4955336/150‑1 (MQ=255) gATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGc > 1:3860690/1‑150 (MQ=255) gATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGc < 2:5077042/150‑1 (MQ=255) gTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTc < 2:3322482/150‑1 (MQ=255) aCTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTcca > 1:1804924/1‑150 (MQ=255) cTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCGTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag < 1:5377110/150‑1 (MQ=255) tGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccagg > 1:1857337/1‑150 (MQ=255) tGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccagg > 2:834835/1‑150 (MQ=255) ccAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccaggccag > 2:1867073/1‑150 (MQ=255) aGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGt > 2:1057487/1‑119 (MQ=255) aGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGt < 1:1057487/119‑1 (MQ=255) gggTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCtt < 1:1100724/150‑1 (MQ=255) gggTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCtt < 1:2580594/150‑1 (MQ=255) gggTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCtt < 1:4370627/150‑1 (MQ=255) tttCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATc > 2:4876983/1‑150 (MQ=255) tGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACg > 1:3950032/1‑150 (MQ=255) tGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACg > 2:2300615/1‑150 (MQ=255) tCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtg < 2:5055474/150‑1 (MQ=255) gATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAGATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtggt > 1:5357608/1‑150 (MQ=255) gCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGCAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGc > 1:2432324/1‑150 (MQ=255) cATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtggt > 1:706612/1‑144 (MQ=255) cATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtggt < 2:706612/144‑1 (MQ=255) cATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGcc > 1:2644029/1‑150 (MQ=255) cTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGc > 2:2473464/1‑150 (MQ=255) aCCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCa > 1:1268418/1‑150 (MQ=255) aCCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCa > 1:3016000/1‑150 (MQ=255) aCCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCa > 1:1446123/1‑150 (MQ=255) aTAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGc > 2:5383492/1‑150 (MQ=255) aGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCt < 2:1855429/150‑1 (MQ=255) aGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCt > 1:420974/1‑150 (MQ=255) aTTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTgg > 1:3570753/1‑150 (MQ=255) ttGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTggg > 1:3823462/1‑150 (MQ=255) ttGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTggg < 1:1856143/150‑1 (MQ=255) ttGAAATCAACCCGGGGCAGGCACGGTCCTGACCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTggg > 2:1492840/1‑150 (MQ=255) aaTCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGt < 2:4239660/150‑1 (MQ=255) cAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCt < 1:2308852/150‑1 (MQ=255) aaCCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCa < 2:4934040/127‑1 (MQ=255) cctcGGGGCAGGACCGTGCCTGCCCCGGGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTg > 2:3584250/4‑150 (MQ=255) aCCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTg > 1:3451226/1‑150 (MQ=255) aCCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTg < 2:204165/150‑1 (MQ=255) cccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGa > 1:849197/1‑150 (MQ=255) cccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGa < 1:2500/150‑1 (MQ=255) cccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGa > 2:1487314/1‑150 (MQ=255) tcGGGGCAGGACCGTGCCTGCCCCGGGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGac > 1:1380741/2‑149 (MQ=255) tcGGGGCAGGACCGTGCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAACCAGGCATCCAGCTTGCCTGGGTTGTCCTTGAt > 2:2597397/2‑150 (MQ=255) ccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGAt > 1:445505/1‑150 (MQ=255) ccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGAt > 1:2515367/1‑150 (MQ=255) ccGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGAt > 1:4351228/1‑150 (MQ=255) gggCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCa > 1:4919975/1‑150 (MQ=255) ggcaggcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCAt > 2:3111708/1‑150 (MQ=255) caggcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCAttt < 1:2367048/150‑1 (MQ=255) aggcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGccagccag < 2:645006/114‑1 (MQ=255) aggcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGccagccag > 1:645006/1‑114 (MQ=255) gcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCtt < 1:5092327/150‑1 (MQ=255) gcaCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCtt < 2:4043347/150‑1 (MQ=255) caCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCGACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTTg > 1:4739190/1‑150 (MQ=255) caCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTTg > 1:3723477/1‑150 (MQ=255) caCGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTTg > 2:1804615/1‑150 (MQ=255) | GCCTTGCGCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTTG > NC_002947/355073‑355370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |