| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,464,363 | T→G | 8.4% | intergenic (+16/+18) | PP_4798 → / ← PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,464,363 | 0 | T | G | 8.4% | 489.7 / 24.8 | 160 | intergenic (+16/+18) | PP_4798/PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Reads supporting (aligned to +/- strand): ref base T (79/67); new base G (5/9); total (84/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
ATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACACC > NC_002947/5464214‑5464512 | atgatgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCt < 1:3028499/150‑1 (MQ=255) atgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgcg < 2:3428016/150‑1 (MQ=255) gatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGcc > 1:2851246/3‑150 (MQ=255) tAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGcccc < 2:3267886/150‑1 (MQ=255) tGCCGCTGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCCCAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCgga < 2:4800857/150‑2 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCTGATGGCTAACCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa < 2:251518/150‑3 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTa > 1:1068296/1‑150 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa < 1:1072798/150‑3 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa > 1:4654447/1‑150 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaat < 1:2512251/150‑4 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaat < 1:2189833/150‑4 (MQ=255) gCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCAc < 2:623522/150‑1 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGc > 1:3580842/1‑150 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGc > 1:634503/1‑150 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGc > 1:259710/1‑150 (MQ=255) aTTATCGGGGCAAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGc > 1:3481443/1‑150 (MQ=255) tATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTg > 2:1984249/1‑126 (MQ=255) ggggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 1:4179919/1‑150 (MQ=255) ggggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 1:4179955/1‑150 (MQ=255) gggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAAc > 1:1424176/1‑150 (MQ=255) ggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACa < 2:3258118/150‑1 (MQ=255) cacaCCCGCACGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc < 1:5107264/147‑1 (MQ=255) aaTACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc < 2:1583871/150‑1 (MQ=255) atccccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATcc < 2:3285810/147‑1 (MQ=255) tACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCt > 2:3615239/1‑150 (MQ=255) tACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCt > 2:5415556/1‑150 (MQ=255) tACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATACCGGGGCCGCGCAGCGGCCCCggaat < 1:4323147/128‑4 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCt > 1:2617064/1‑150 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTcc > 1:2583089/1‑150 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa < 1:3103098/122‑3 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa > 2:3103098/1‑120 (MQ=255) gCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCAc > 2:2370715/1‑150 (MQ=255) aaTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa > 1:1516077/1‑150 (MQ=255) aaTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa > 2:2686215/1‑150 (MQ=255) aTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAg > 1:4857827/1‑150 (MQ=255) aTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAg > 1:1361659/1‑150 (MQ=255) tCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAgt < 1:1692546/150‑1 (MQ=255) aaTGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTg < 1:2422118/150‑1 (MQ=255) ccAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGaa > 2:4395233/1‑150 (MQ=255) aGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAaca > 1:3265218/1‑150 (MQ=255) cAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACt < 1:691518/150‑1 (MQ=255) cAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACt < 1:692009/150‑1 (MQ=255) aGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGt > 2:2569875/1‑150 (MQ=255) cTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGc < 1:619227/118‑1 (MQ=255) tGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGc < 1:1844220/150‑1 (MQ=255) ggATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCt > 1:3726753/1‑150 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc > 1:1007574/1‑108 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc > 1:1007438/1‑108 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc < 2:1007438/108‑1 (MQ=255) cggcggATGGCTACCCTACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTACAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGa < 1:758303/150‑1 (MQ=255) cggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGa < 1:4881404/150‑1 (MQ=255) ggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAg < 2:297620/150‑1 (MQ=255) cggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGcc > 2:4103060/1‑150 (MQ=255) gATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGcccc < 1:2569875/150‑1 (MQ=255) aTGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGccccc < 1:3584859/150‑1 (MQ=255) ggCTTCCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAg < 1:919309/150‑1 (MQ=255) ggCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAg < 1:3763592/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 1:2445122/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 2:1375695/150‑1 (MQ=255) tACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCTGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg > 2:3396078/1‑150 (MQ=255) tACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg < 2:2978464/150‑1 (MQ=255) tACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTAGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg > 2:3046804/1‑150 (MQ=255) cccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 1:2862982/71‑1 (MQ=255) cccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa > 2:2862982/1‑71 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa < 2:5008449/150‑1 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa < 2:5203636/150‑1 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa > 1:2390584/1‑150 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg < 2:589538/62‑1 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg > 1:589538/1‑62 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa < 1:5008042/99‑1 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa > 2:5008065/1‑99 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGc > 2:1915840/1‑122 (MQ=255) acaAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCCTACa > 1:3963563/1‑150 (MQ=255) acaAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCACACCCGAGCCCCCAGGGGCAAGCATACa > 1:5244994/1‑150 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTg < 1:3939723/102‑1 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTg > 2:3939723/1‑102 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGCACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACAtt > 1:1963479/1‑150 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACAtt > 1:1963374/1‑150 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg > 1:4329870/1‑150 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 2:4986375/150‑1 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 1:1592574/150‑1 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 1:208657/150‑1 (MQ=255) ctgctTGAGAGCCGGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 2:2494119/150‑1 (MQ=255) tgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAt < 2:3119944/58‑1 (MQ=255) tgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAt > 1:3119944/1‑58 (MQ=255) gctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGt > 1:2843366/1‑150 (MQ=255) ctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGGTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCACGCCTACATTCGGGTc > 1:3259839/1‑150 (MQ=255) gagaGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTcaca < 2:1232999/150‑1 (MQ=255) gagaGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTcaca < 1:5103869/150‑1 (MQ=255) gagaGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTcaca > 1:4489262/1‑150 (MQ=255) gagCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGt < 1:4575980/150‑1 (MQ=255) agCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTg < 1:4341369/150‑1 (MQ=255) tGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCg > 2:2462077/1‑150 (MQ=255) gcgcCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGc > 1:125569/1‑150 (MQ=255) cATTCCGGGGCCGCTGCGCGGCCCCCGTAATCTAACCCCCTGAACAGATACTGCTCCAGCACCACTGTTTGCTGAACACTGTCCAGCCTCACCCCAGCCCCCACGGGCAAGCATACAATCGGGTCACACTGCCCCCGGCGCCAACCCGcc > 1:2359085/1‑150 (MQ=255) ttaccGGGGCCGCGCAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCa > 1:3696439/4‑150 (MQ=255) ccGGGGCCGCGCAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCa > 1:4910098/1‑150 (MQ=255) cGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCAc < 2:3580842/150‑1 (MQ=255) gggCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCg > 1:3151062/1‑150 (MQ=255) tGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACAcc < 1:3959850/150‑1 (MQ=255) | ATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACACC > NC_002947/5464214‑5464512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |