| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,464,364 | G→C | 8.2% | intergenic (+17/+17) | PP_4798 → / ← PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,464,364 | 0 | G | C | 8.2% | 512.9 / 28.0 | 158 | intergenic (+17/+17) | PP_4798/PP_4799 | membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase |
| Reads supporting (aligned to +/- strand): ref base G (78/67); new base C (5/8); total (83/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
ATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACACC > NC_002947/5464217‑5464512 | gccccgatAATGCCATCGGCATTACCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgcg > 2:2388257/8‑150 (MQ=255) gCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 1:956882/1‑150 (MQ=255) aTGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg < 1:2383157/150‑1 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTa > 1:1068296/1‑150 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTa > 1:3809112/1‑150 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa < 1:1072798/150‑3 (MQ=255) ggCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCg < 1:2522939/141‑1 (MQ=255) ggCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCg > 2:2522939/1‑141 (MQ=255) gCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCAc < 2:2060276/150‑1 (MQ=255) gCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCAc < 2:623522/150‑1 (MQ=255) aTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGc > 1:634503/1‑150 (MQ=255) tATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTg > 2:1984249/1‑126 (MQ=255) tCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTg > 1:1583871/1‑150 (MQ=255) ggggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 1:4179955/1‑150 (MQ=255) gggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAAc > 1:1424176/1‑150 (MQ=255) ggCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACa < 2:3258118/150‑1 (MQ=255) agaCCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATcc < 2:2997421/148‑1 (MQ=255) tACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCt > 2:3615239/1‑150 (MQ=255) tACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCt > 2:5415556/1‑150 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTACGCTCACGCCCTGAACAGATCCGGcg > 2:3963201/1‑149 (MQ=255) ccGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCt > 1:2617064/1‑150 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTcc > 1:2583089/1‑150 (MQ=255) gCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGCCCCggaa > 2:3103098/1‑120 (MQ=255) cAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa > 1:2511046/1‑131 (MQ=255) cAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGaa < 2:2511046/131‑1 (MQ=255) aaTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa > 1:1516077/1‑150 (MQ=255) aTCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAg > 1:1361659/1‑150 (MQ=255) tCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAgt < 1:1692546/150‑1 (MQ=255) gCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGtt < 1:3971118/150‑1 (MQ=255) aaTGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTg < 1:2886323/150‑1 (MQ=255) aaTGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTg > 2:3125884/1‑150 (MQ=255) ccAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGaa > 1:5166655/1‑150 (MQ=255) ccAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGaa > 2:4395233/1‑150 (MQ=255) aGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAaca < 1:3487002/150‑1 (MQ=255) aGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAaca > 1:3265218/1‑150 (MQ=255) aGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAaca > 1:3149875/1‑150 (MQ=255) cAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACt < 1:692009/150‑1 (MQ=255) cAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACt < 1:691518/150‑1 (MQ=255) aGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGt > 2:2569875/1‑150 (MQ=255) gggCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTc > 2:3342143/1‑150 (MQ=255) cTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGc < 1:619227/118‑1 (MQ=255) tGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGc < 1:1844220/150‑1 (MQ=255) gggATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGcc > 1:4737013/1‑150 (MQ=255) ggATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCCCCAGTGTTTGCTGAACACTGTACAGCCt > 1:3726730/1‑150 (MQ=255) ggATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCt > 1:3726753/1‑150 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc < 2:1007438/108‑1 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc > 1:1007574/1‑108 (MQ=255) tGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATc > 1:1007438/1‑108 (MQ=255) ccGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCg > 1:3946905/1‑150 (MQ=255) cggcggATGGCTACCCTACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTACAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGa < 1:758303/150‑1 (MQ=255) cggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGa < 2:2874439/150‑1 (MQ=255) cggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGa < 1:4881404/150‑1 (MQ=255) ggcggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAg < 2:297620/150‑1 (MQ=255) cggATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGcc > 2:4103060/1‑150 (MQ=255) aTGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGccccc < 1:3584859/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGTTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTTTCCAGCCTCACCCGAGCCCCCAggg < 2:174747/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 1:2445122/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 2:356610/150‑1 (MQ=255) cTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAggg < 2:1375695/150‑1 (MQ=255) tACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCTGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg > 2:3396078/1‑150 (MQ=255) tACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTAGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAgggg > 2:3046804/1‑150 (MQ=255) aCCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGc < 1:2591771/150‑1 (MQ=255) cccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 1:2862982/71‑1 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa < 2:5008449/150‑1 (MQ=255) ccGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCaa < 2:5203636/150‑1 (MQ=255) aCCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCa < 2:3278618/150‑1 (MQ=255) cccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCAt < 1:3653284/150‑1 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg < 2:589538/62‑1 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCgg > 1:589538/1‑62 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa < 1:5008042/99‑1 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCa > 2:5008065/1‑99 (MQ=255) ccACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGc < 1:1915840/122‑1 (MQ=255) acaAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCACACCCGAGCCCCCAGGGGCAAGCATACa > 1:5244994/1‑150 (MQ=255) aaGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGCACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACAtt > 1:1963479/1‑150 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 1:208657/150‑1 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 2:4986375/150‑1 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg > 1:4329735/1‑150 (MQ=255) ctgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg > 1:4329870/1‑150 (MQ=255) ctgctTGAGAGCCGGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCgg < 2:2494119/150‑1 (MQ=255) tgctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAt > 1:3119944/1‑58 (MQ=255) gctTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGt > 1:2843371/1‑150 (MQ=255) gagaGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTcaca < 1:5103869/150‑1 (MQ=255) gagaGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTcaca < 2:1232999/150‑1 (MQ=255) gagCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGt < 1:4575980/150‑1 (MQ=255) gagCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGt < 1:4463346/150‑1 (MQ=255) gagCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGt > 1:3335866/1‑150 (MQ=255) gagCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGt < 2:2839179/150‑1 (MQ=255) ccTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTcc > 2:4927427/1‑74 (MQ=255) ccTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTcc < 1:4927427/74‑1 (MQ=255) cTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGccc > 1:4257620/1‑150 (MQ=255) tGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCg > 1:4525761/1‑150 (MQ=255) gcgcCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGc > 1:125569/1‑150 (MQ=255) gcCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTg > 1:2177533/1‑150 (MQ=255) aGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCg < 1:4873470/150‑1 (MQ=255) gCATTCCGGGGCCGCTGCGCGGCCCCGGTAATATCACGCCCAGAACAGATCCAGCTCCAGCACCAGTGTTTGCTGAACACAGTCCAGCCAAACCCCAGCCCCCACGGGCAAGCATAAAATCGGGTCACAGTGCCCGCGGCGCCAACCCGc > 1:2408659/1‑150 (MQ=255) cATTCCGGGGCCGCTGCGCGGCCCCCGTAATCTAACCCCCTGAACAGATACTGCTCCAGCACCACTGTTTGCTGAACACTGTCCAGCCTCACCCCAGCCCCCACGGGCAAGCATACAATCGGGTCACACTGCCCCCGGCGCCAACCCGcc > 1:2359085/1‑150 (MQ=255) cGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCAc < 2:3580842/150‑1 (MQ=255) cGGGGCCGCGCAGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCAc > 1:27005/1‑150 (MQ=255) tGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACAcc > 1:3209748/1‑150 (MQ=255) tGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACAcc < 1:3959850/150‑1 (MQ=255) | ATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTCACGCCCTGAACAGATCCTGCTCCAGCACCAGTGTTTGCTGAACACTGTCCAGCCTCACCCGAGCCCCCAGGGGCAAGCATACATTCGGGTCACAGTGCCCGCTGCGCCAACCCGCCAGCACCGGCACACC > NC_002947/5464217‑5464512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |