| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,503,385 | T→A | 13.5% | intergenic (+26/‑193) | PP_4834 → / → PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,503,385 | 0 | T | A | 13.5% | 330.8 / 3.5 | 127 | intergenic (+26/‑193) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/69); new base A (16/2); total (54/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.09e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 128 total aligned reads displayed.
GGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATA > NC_002947/5503239‑5503533 | gggCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATC < 1:3021311‑M1/150‑1 (MQ=255) ggCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCG > 2:2004589‑M1/1‑150 (MQ=255) gCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATCGC > 2:1560220‑M1/1‑150 (MQ=255) gAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGA < 2:4657410‑M1/150‑1 (MQ=255) cTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAA < 2:1289290‑M1/150‑1 (MQ=255) tgtgGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGC < 1:4514949‑M1/150‑1 (MQ=255) gtgGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC < 2:1577193‑M1/150‑1 (MQ=255) tgGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGccc < 1:1701395/150‑1 (MQ=255) gggCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGcccc < 1:3972364/150‑1 (MQ=255) cgcgATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCcaca < 2:4701506/150‑1 (MQ=255) gATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGa < 2:2784795/150‑1 (MQ=255) gATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGa < 2:2784825/150‑1 (MQ=255) ggAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAg > 2:4317642/1‑150 (MQ=255) ggAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGGTGCGCCCCAATCGCGACACAAAGCCCCACACGACAg > 2:4317705/1‑150 (MQ=255) gagaACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCGATCGCGCCACAAGGCCCCCCAGGACAgc > 2:563463/1‑150 (MQ=255) aaCCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCa < 1:1708351/150‑1 (MQ=255) aaCCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAAACGCCACACAAAGCCCCACAGGACAGCGCa > 2:2483484/1‑150 (MQ=255) ccTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACACAAGGCCCCACAGGACACCGCAGt > 2:4775868/1‑150 (MQ=255) tCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTAt > 2:2396673/1‑150 (MQ=255) cgcgGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTGGCCCCGAAAGCGACACAAGGCCCCCCACGCCACCGCAGTAtt > 1:3686362/1‑150 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:5239325/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 2:2907005/150‑1 (MQ=255) ggggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:4806168/150‑1 (MQ=255) ccgatctagcaATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGa < 1:949818/143‑1 (MQ=255) ggAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAgg < 2:1159154/150‑1 (MQ=255) gAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGGTTTTGGGCCCTTTGGGGACACAATGGGCCGCAGGGCAGGGGGGTAttggttgg > 1:2063232/1‑144 (MQ=255) cagcaATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATCGCGACACAAGGCCCCACACGACAGCGCAGTATTAGAGGCTGc > 1:392341/1‑150 (MQ=255) gcaATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGCGTTTGGCCCCCATCGCGACACAAAGCCCCACACGCCAGCGCCCTATTAGGGGCTGACg > 1:4610942/1‑150 (MQ=255) gcaATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATAGCGACACAAGGCCCCACACGACAGCGCCCTATTagagagatagg > 2:949818/1‑143 (MQ=255) aTGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCaa < 1:658535/150‑1 (MQ=255) tGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAt < 1:5297313/150‑1 (MQ=255) tGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAt < 1:5297340/150‑1 (MQ=255) gCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAtt > 2:5116582/1‑150 (MQ=255) cAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATAGCGACACAAGGCCCCCCAGGACAGCGCCGTATTAGAGGCATCCGCaaatag > 2:1070510/1‑146 (MQ=255) aGGTGGTGGTGTTGCCGGCTGACCGGCAAGAGACCGTGCGCGGGGTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCtgt < 2:165818/150‑1 (MQ=255) gtggtggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg < 1:4006808/150‑1 (MQ=255) gtggtggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg < 2:2938184/150‑1 (MQ=255) gtggtggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGGTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg < 2:5160538/150‑1 (MQ=255) tggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATCGCCACACAAGGCCCCACAGGACAGCGCCGTATTCGAGGCTGCCGCAAATCAGTGGGAGc > 2:3923558/1‑150 (MQ=255) tGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggcctt > 1:3900506‑M2/1‑144 (MQ=255) gCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAg < 1:3079680/142‑1 (MQ=255) gCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAg > 2:3079680/1‑142 (MQ=255) ccGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgt > 2:1806790‑M2/1‑142 (MQ=255) ggCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgt < 1:4369904‑M1/150‑57 (MQ=255) gCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtc > 2:3880206‑M2/1‑139 (MQ=255) cTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCCATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcg < 2:4802756‑M1/150‑59 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgc < 1:2197044‑M1/150‑60 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtcgc > 2:3457443‑M2/1‑137 (MQ=255) tGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCCCCCCCAAACCCCCACCACGCCCCACACGACACCCCCCGATTCGCGGCGGCCCCAAATCAGTGGGCGCCGCCGGGTGTcgc > 2:2835296/1‑150 (MQ=255) ccTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCCATTCAGTTGGAGCgggcaggtgtcgcgat < 2:3722364‑M2/150‑17 (MQ=255) cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGCTTTTGGCCCCAATAGCGTCACAAGGCCCCACAGGAGAGCGCAGTATTGGTGGCTGCCGCCATTATTTTGGTTGGGGCTTGTGTGGCGATg > 1:5280786/1‑150 (MQ=255) cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATTGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgata < 2:4874421‑M1/150‑64 (MQ=255) tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATAGCGACACAAGGCCCCACAGGACAGCGCCGTATTAGAGGCTGCCGCAATTATGTGGGAGCGGCCTTTTGTCGCGATgg > 1:4030805/1‑150 (MQ=255) tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGGGCCCCAAACGCGCCACAAAGCCCCACCGGACAGCCCACTCTTAGAGGCTGCCGCAAATAATTGGGAGGGGCCGTGTGTggcgcatg > 1:599327/1‑146 (MQ=255) tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATCGCGACACAAGGCCCCACAGGCCAGCGCAGTATTCGAGGCTGCCGCAATTCGGTGGGAGCggccgggtgtcgcgaggg < 2:2522560‑M2/150‑19 (MQ=255) gCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAAAACCGACACAATGCCCCACACGCCCGCGCCGTATTCGTGGCGGCCGCACATCAGTGGGAGCGGCCGGGTGTCGCCGTggg > 2:3430445/1‑150 (MQ=255) gCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCTATCGCGCCCCAACGCCCCACAGGCCCGCGCAGTATTCGAGGCGGCCGCACGTCTGTGGGAGCGGGCGTGTGTCGCGATggg > 2:3430508/1‑150 (MQ=255) aaGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatag > 1:3280443‑M1/1‑83 (MQ=255) aaGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatag < 2:3280443‑M1/147‑65 (MQ=255) aaGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatag > 1:3280537‑M1/1‑83 (MQ=255) aCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGCCCCAAGGCCCCACAGGACCGCGCAGTATTCGAGGCGGCCGCCATTCTGTGGGAGCGGCCGTGTGTCGCGATGGGCTGcccc > 2:5358221/1‑147 (MQ=255) aCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGcaca < 2:4582092/150‑1 (MQ=255) cGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGTGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGctgtgc < 1:666626/150‑6 (MQ=255) gTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 1:1905079/150‑1 (MQ=255) gTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 1:1905326/150‑1 (MQ=255) gcgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTGGCCCCAATAGCGACACAAAGCCCCACAGGACACCGCCGTAATCGAGGCTGCCGCAAATATGTTGGATCGGCCGTTTTTCGCGATGGGGTGCACAGCAGccc > 1:1268869/1‑150 (MQ=255) gggTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGGGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAATCTGTGGGAGCGGCCGTGTGTCGCGCTGGGCTGCACAGCAGccccc > 2:1187901/1‑150 (MQ=255) gTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccatcg < 2:4610942/150‑5 (MQ=255) ttGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccatcgc < 2:2949631/150‑6 (MQ=255) ttGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGAGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCAtt < 1:400741/150‑1 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACAAAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAGTCTGTTGGGGCGGCCTTGTTTGGCGATTGGGTGCACAGCAGCCCCCATTACCAg > 2:78976/1‑150 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCCACACAAAGCCCCACAGGAAAGCGCAGTAATCGAGGCTGCCCCAAATCGGTGGGAGCGGCCGTGTGTAGCGATTGGCTGCACAGCAGCCCCCAATaaaac > 2:3456991/1‑146 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTTCGCCCCAATAGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAATCAGTGGGGGCGGCCTAGTGTCGCGATGGGCTGCACAGCAGCCCCCAAAACCAg > 2:3456956/1‑150 (MQ=255) gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGac < 2:3243910/150‑1 (MQ=255) gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGac < 2:3243819/150‑1 (MQ=255) aacaaGATTTGAGAGTGTCGGGGGCGCTTTGGGCCCCAATAGCGGCACAAGGCCCCACAGGGCAGCGCAGTATTAGAGGCTGCCGCAAATCTTTTGGTGCGGCCGGGTGTCGCGATGGGCTGCACAGCAGCCCCCAATAACACaccaccg > 2:4144949/1‑149 (MQ=255) caaGATTTGAGAGTGTCGGGGGGGGTTTTGGCCCCTATGGCGTGACAATGGCCCACAGGTCATCGCAGTTTTGGTGGGTGGGGGAATTGTGTGGGTGCGGGCTTGTGTGGGGTTTGGCTGGACAGCGGGCCCCATTAACAGtacaccagg > 2:404001/1‑147 (MQ=255) caaGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGc < 2:878318/150‑1 (MQ=255) tttGTGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACACGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCAc < 1:1560220/150‑1 (MQ=255) tCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc < 2:1789675/150‑1 (MQ=255) tCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc < 2:1789858/150‑1 (MQ=255) tttGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtcgcgatgggggcgcaaagcgcccccgacactctcaaatcttgttgcggcccatcaacccgcgcacgg < 2:253397‑M2/150‑78 (MQ=255) tttGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttt > 1:4238368/1‑150 (MQ=255) tGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttttt < 2:4238368/150‑1 (MQ=255) tGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttttt < 1:5116582/150‑1 (MQ=255) gcgcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTTGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTa > 1:2193541/1‑150 (MQ=255) cgcCCCTATCGCTACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGAAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc < 1:2429648/150‑1 (MQ=255) cgcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc < 1:1429529/150‑1 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc > 1:2263211/1‑150 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc < 1:4317705/150‑1 (MQ=255) cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTTGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCta < 2:2193541/150‑1 (MQ=255) cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCt > 1:130396/1‑116 (MQ=255) ccTCTCGCGCCCCACGGCCCCACAGGACAGCGCCGTATTCGAGGCCGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACCGCACCCCCCACGACCAGCCCACCAGCGTCACGCCCCCGCACCCCGGCATTATTACCtat < 2:302161/150‑1 (MQ=255) ccTCTCGCGACACAAGGCCCCACTGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGAGATGGGCTGCACAGAAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtat < 2:302238/150‑1 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTTTTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata < 1:2305011/150‑1 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtcgcgataggggcgcaaagcgcccccgacactctcaaatcttgttgcggcccatcaacccgcgcacggtctctt > 1:3280537‑M2/1‑64 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtcgcgataggggcgcaaagcgcccccgacactctcaaatcttgttgcggcccatcaacccgcgcacggtctctt < 2:3280443‑M2/147‑84 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCggccttgtgtcgcgataggggcgcaaagcgcccccgacactctcaaatcttgttgcggcccatcaacccgcgcacggtctctt < 2:3280537‑M2/147‑84 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata > 1:3958400/1‑150 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata < 1:2396673/150‑1 (MQ=255) | GGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATA > NC_002947/5503239‑5503533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |