| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,503,471 | A→T | 6.9% | intergenic (+112/‑107) | PP_4834 → / → PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,503,471 | 0 | A | T | 6.9% | 325.6 / 10.7 | 102 | intergenic (+112/‑107) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (46/49); new base T (3/4); total (49/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
AGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCAG > NC_002947/5503322‑5503620 | agaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGca < 1:3910563/150‑1 (MQ=255) aCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGcaca < 2:4582092/150‑1 (MQ=255) gTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 1:1905079/150‑1 (MQ=255) gTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAcagca < 1:1905326/150‑1 (MQ=255) gcgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTGGCCCCAATAGCGACACAAAGCCCCACAGGACACCGCCGTAATCGAGGCTGCCGCAAATATGTTGGATCGGCCGTTTTTCGCGATGGGGTGCACAGCAGccc > 1:1268869/1‑150 (MQ=255) gTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccatcg < 2:4610942/150‑5 (MQ=255) ttGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccatcgc < 2:2949631/150‑6 (MQ=255) ttGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGAGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCAtt < 1:400741/150‑1 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACAAAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAGTCTGTTGGGGCGGCCTTGTTTGGCGATTGGGTGCACAGCAGCCCCCATTACCAg > 2:78976/1‑150 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCCACACAAAGCCCCACAGGAAAGCGCAGTAATCGAGGCTGCCCCAAATCGGTGGGAGCGGCCGTGTGTAGCGATTGGCTGCACAGCAGCCCCCAATaaaac > 2:3456991/1‑146 (MQ=255) gggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTTCGCCCCAATAGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAAATCAGTGGGGGCGGCCTAGTGTCGCGATGGGCTGCACAGCAGCCCCCAAAACCAg > 2:3456956/1‑150 (MQ=255) gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGac < 2:3243910/150‑1 (MQ=255) gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGac < 2:3243819/150‑1 (MQ=255) ccGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGacc < 2:423093/150‑1 (MQ=255) aacaaGATTTGAGAGTGTCGGGGGCGCTTTGGGCCCCAATAGCGGCACAAGGCCCCACAGGGCAGCGCAGTATTAGAGGCTGCCGCAAATCTTTTGGTGCGGCCGGGTGTCGCGATGGGCTGCACAGCAGCCCCCAATAACACaccaccg > 2:4144949/1‑149 (MQ=255) caaGATTTTAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACTAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGATGCACAGCAGCCCCCATTACCAGACCACCTGc < 2:4434705/150‑1 (MQ=255) caaGATTTGAGAGTGTCGGGGGGGGTTTTGGCCCCTATGGCGTGACAATGGCCCACAGGTCATCGCAGTTTTGGTGGGTGGGGGAATTGTGTGGGTGCGGGCTTGTGTGGGGTTTGGCTGGACAGCGGGCCCCATTAACAGtacaccagg > 2:404001/1‑147 (MQ=255) caaGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGc < 2:3015060/150‑1 (MQ=255) tttGTGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACACGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCAc < 1:1560220/150‑1 (MQ=255) tCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc < 2:1789675/150‑1 (MQ=255) tCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAc < 2:1789858/150‑1 (MQ=255) ggggCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCAcccc < 2:1751599/150‑1 (MQ=255) tttGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttt > 1:4238368/1‑150 (MQ=255) tGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCAttttt < 2:4238368/150‑1 (MQ=255) gcgcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTTGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTa > 1:2193541/1‑150 (MQ=255) cgcCCCTATCGCTACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGAAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc < 1:2429648/150‑1 (MQ=255) cgcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGTGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc < 1:9612/150‑1 (MQ=255) cgcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc < 1:1429529/150‑1 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc > 1:2263205/1‑150 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc > 1:2263211/1‑150 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc > 1:2932764/1‑150 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc < 1:4317642/150‑1 (MQ=255) gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc < 1:4317705/150‑1 (MQ=255) cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTTGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCta < 2:2193541/150‑1 (MQ=255) cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCt < 2:130396/116‑1 (MQ=255) cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCt > 1:130396/1‑116 (MQ=255) ccTCTCGCGCCCCACGGCCCCACAGGACAGCGCCGTATTCGAGGCCGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACCGCACCCCCCACGACCAGCCCACCAGCGTCACGCCCCCGCACCCCGGCATTATTACCtat < 2:302161/150‑1 (MQ=255) ccTCTCGCGACACAAGGCCCCACTGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGAGATGGGCTGCACAGAAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtat < 2:302238/150‑1 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTTTTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata < 1:2305011/150‑1 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata < 1:2396673/150‑1 (MQ=255) cTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCtata > 1:3958400/1‑150 (MQ=255) tCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTc < 1:3269279/150‑1 (MQ=255) tCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGACCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAACTATACTc > 2:3504159/1‑150 (MQ=255) cgcgACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTcc > 2:497671/1‑150 (MQ=255) gcgACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTccg > 1:2618798/1‑150 (MQ=255) gcgACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTccg > 1:5039790/1‑150 (MQ=255) aaGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACa > 2:1116751/1‑150 (MQ=255) aaGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACa > 2:383819/1‑150 (MQ=255) aaGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACa > 2:383865/1‑150 (MQ=255) aaGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACa > 1:1219544/1‑150 (MQ=255) aaGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACa > 1:2235212/1‑150 (MQ=255) aGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACaa < 2:2741508/150‑1 (MQ=255) ggCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccat < 1:48723/85‑3 (MQ=25) ggCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccat > 2:48723/1‑83 (MQ=25) ggCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccat < 1:48880/85‑3 (MQ=25) ggCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCTGTGCAGcccat > 2:48880/1‑83 (MQ=25) cccACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGc < 2:4551287/150‑1 (MQ=255) acaGGACAGCGCTGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGccac < 1:563463/150‑1 (MQ=255) acaGGACAGCGCATTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGccac < 1:1070510/150‑1 (MQ=255) aGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGccacca < 1:4765792/150‑1 (MQ=255) aCAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGa > 1:4391237/1‑150 (MQ=255) cAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGAt < 2:4005021/150‑1 (MQ=255) cAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGAt < 1:3089694/150‑1 (MQ=255) gcgcAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTc > 1:4770112/1‑150 (MQ=255) gcgcAGTATTCGAGGCTGCCGCAATACTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACAGCACCCCGGCATTTTTACCTATACTCCCCCGTACAATAGCCACCACGATTc < 2:2063232/150‑1 (MQ=255) gcAGTATTCGAGGCTGCCTCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCt < 2:3298789/150‑1 (MQ=255) gcAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCt < 1:2249122/150‑1 (MQ=255) aGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGa < 2:3686362/150‑1 (MQ=255) tCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGa < 2:2100986/150‑1 (MQ=255) tCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGa < 1:754880/150‑1 (MQ=255) cGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt < 1:5226618/150‑1 (MQ=255) gCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAtctct > 2:4069690/1‑150 (MQ=255) gCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCa > 1:3964570/1‑150 (MQ=255) gCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGAAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATATCCACCACGATTCCTGACCGGATCTCTCCa > 1:878815/1‑150 (MQ=255) gCCGCAAATCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCAGACCGGAGCTCGCCa > 1:1915850/1‑150 (MQ=255) cGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATg > 2:3475746/1‑150 (MQ=255) cGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATg > 1:5299610/1‑150 (MQ=255) cAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGcc > 1:4756070/1‑150 (MQ=255) gtgGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGt > 2:2925508/1‑150 (MQ=255) ggAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCgg > 2:4989830/1‑150 (MQ=255) ggAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCgg > 2:4989853/1‑150 (MQ=255) ggAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCgg > 2:4990104/1‑150 (MQ=255) ggCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACAt < 2:1268869/150‑1 (MQ=255) ttGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGcc > 1:2806062/1‑150 (MQ=255) tgtgTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCt < 2:392341/150‑1 (MQ=255) aatgggggCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAg > 2:544186/6‑150 (MQ=255) cgATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAgc > 2:1108434/1‑150 (MQ=255) cgATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAgc < 1:4775868/150‑1 (MQ=255) cgATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAgc > 2:1108415/1‑150 (MQ=255) ggggCTGCTGTGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAgcctg > 2:1496718/2‑150 (MQ=255) cTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCtt > 1:3421399/1‑150 (MQ=255) tgaacaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTg < 1:2522560/147‑1 (MQ=255) tGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAgcc < 1:220322/143‑1 (MQ=255) tGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTg > 1:1163247/1‑150 (MQ=255) tGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCACCACGTCGGCACATTGCCTGGATAGCCTGCCTTg > 1:427268/1‑150 (MQ=255) cacaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGTCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCa < 1:404001/150‑1 (MQ=255) cacaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCa < 1:3456956/150‑1 (MQ=255) cacaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCa < 1:3456991/150‑1 (MQ=255) cacaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCa < 2:599327/150‑1 (MQ=255) acaGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCAg > 1:502361/1‑150 (MQ=255) | AGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGCCTGCCTTGCAG > NC_002947/5503322‑5503620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |