| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,510,634 | G→C | 5.5% | S90T (AGC→ACC) ‡ | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,510,634 | 0 | G | C | 5.5% | 486.4 / 13.6 | 146 | S90T (AGC→ACC) ‡ | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (63/75); new base C (4/4); total (67/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GGGACCATGGCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAAC > NC_002947/5510486‑5510782 | ggACCATGGCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGcc < 2:639889/150‑1 (MQ=255) aCCATGGCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGt < 1:2391200/150‑1 (MQ=255) cATGGCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCa > 1:279065/1‑150 (MQ=255) ggCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAAct > 1:3640873/1‑150 (MQ=255) ggCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAAct < 1:2135771/150‑1 (MQ=255) cATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAActgct > 1:1025797/1‑150 (MQ=255) aTTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAActgctg > 1:591148/1‑150 (MQ=255) ccGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGAccc > 2:2990344/1‑150 (MQ=255) ccGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCAGTCAACTGCTGAccc > 2:2539139/1‑150 (MQ=255) cGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCa > 1:5167514/1‑150 (MQ=255) gagaCATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAg < 2:4899970/150‑1 (MQ=255) tCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACaaa > 2:4771909/1‑150 (MQ=255) cGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAg < 2:3415446/150‑1 (MQ=255) cTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTg > 2:3451639/1‑150 (MQ=255) cTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTg < 1:695628/150‑1 (MQ=255) aaGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTggac > 2:4933492/1‑148 (MQ=255) aaGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGcc < 2:1587360/150‑1 (MQ=255) aGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCg > 1:172501/1‑150 (MQ=255) aCATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtgg < 1:1347366/150‑1 (MQ=255) cATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtggt < 2:3815460/150‑1 (MQ=255) aTGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtggtg > 2:5083129/1‑150 (MQ=255) ggCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGtt < 1:859491/150‑1 (MQ=255) gcgcTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTc > 2:1677545/1‑150 (MQ=255) gcgcTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTc < 2:2812089/150‑1 (MQ=255) gcgcTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCAGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTc < 2:2639592/150‑1 (MQ=255) gatgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctg > 2:4130937/1‑150 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 1:2407579/150‑1 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 2:2129117/150‑1 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 2:3603918/150‑1 (MQ=255) cATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGAc > 1:3406583/1‑150 (MQ=255) aTCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACa > 2:2313135/1‑150 (MQ=255) aTCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACa < 1:2722541/150‑1 (MQ=255) gAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATcc < 2:1072225/150‑1 (MQ=255) gAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATcc > 2:2106457/1‑150 (MQ=255) aGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCg > 1:3607468/1‑150 (MQ=255) gCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgt < 1:3294987/150‑1 (MQ=255) aGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgtgt < 2:2909572/150‑1 (MQ=255) aGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgtgt < 2:1734871/150‑1 (MQ=255) tCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgc < 2:2131470/150‑1 (MQ=255) cAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgcg > 1:3568342/1‑150 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgc < 2:4790061/148‑1 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgc > 1:4790061/1‑148 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCgcgc > 2:3557888/1‑150 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTCGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCgcgc > 2:3557877/1‑150 (MQ=255) cGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCaa < 2:2518827/150‑1 (MQ=255) ccAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGTGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGt < 1:1362904/150‑1 (MQ=255) ccAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGt < 2:4395536/150‑1 (MQ=255) cAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtgg < 1:1446243/116‑1 (MQ=255) cAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTc > 2:240438/1‑150 (MQ=255) aaGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCt < 2:637202/150‑1 (MQ=255) gCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGc > 2:732373/1‑150 (MQ=255) gCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGc > 2:732347/1‑150 (MQ=255) gTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCg > 1:4195718/1‑150 (MQ=255) cAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCga < 1:5043307/150‑1 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa < 1:254430/150‑1 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa < 1:3925074/150‑1 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa > 1:3190422/1‑150 (MQ=255) ggAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAAcaccg < 1:732373/150‑5 (MQ=255) ggAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAAcaccg < 1:732347/150‑5 (MQ=255) gAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAAc > 1:2605474/1‑150 (MQ=255) ccGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGc < 2:3000484/150‑1 (MQ=255) ccGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGc < 1:1714191/150‑1 (MQ=255) ggtCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGtt > 1:2930767/1‑150 (MQ=255) tCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCTACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGtt < 2:5204281/113‑1 (MQ=255) tCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCt > 2:573265/1‑150 (MQ=255) gACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTAc < 1:2990344/150‑1 (MQ=255) cGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCgg > 2:3313176/1‑150 (MQ=255) tCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGgt < 2:2688440/110‑1 (MQ=255) tCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGgt > 1:2688440/1‑110 (MQ=255) cgattGGCCGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTa < 1:2656348/146‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 1:252363/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 1:252323/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 2:4284947/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 2:4221832/150‑1 (MQ=255) aaCTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACCTCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGGTCTCCCCGGTGccggat > 2:1165634/1‑145 (MQ=255) aaCTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTCCCCGGTGCAGTag > 2:3696854/1‑149 (MQ=255) aaCTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTAt > 1:3119883/1‑150 (MQ=255) cTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGa < 2:1763034/150‑1 (MQ=255) tGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAg > 2:1478350/1‑150 (MQ=255) tGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAg < 2:278135/150‑1 (MQ=255) gCCGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAagg > 1:4133602/1‑150 (MQ=255) cGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAaggtg > 1:4971632/1‑148 (MQ=255) cGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAaggtg > 2:291867/1‑148 (MQ=255) gCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGa < 1:4429763/150‑1 (MQ=255) gCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGa < 2:3851963/150‑1 (MQ=255) gCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGa < 2:1111401/150‑1 (MQ=255) gTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAaga < 2:1884154/150‑1 (MQ=255) ttCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAggaa > 1:4420799/1‑149 (MQ=255) ttCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAagag < 1:4130937/150‑1 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCa < 1:3749085/107‑1 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGAt < 2:5179273/150‑1 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGAt < 2:229393/150‑1 (MQ=255) gCTGAAAAGAGCCGTTAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATg > 2:4438672/1‑150 (MQ=255) cTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGt < 2:349119/150‑1 (MQ=255) tGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGTCCGGGGTGATCGGCTGCTGGACAACCGTCTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACACAACGGCCTGCTGATCTACCCGGTGCAGTATGAAGGCGAAGAGATgac > 1:3001662/1‑148 (MQ=255) aaaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGt > 1:2472768/1‑129 (MQ=255) aaaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGt < 2:2472768/129‑1 (MQ=255) aaaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGc < 2:279065/150‑1 (MQ=255) aaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGcc < 1:3451639/150‑1 (MQ=255) agCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAAc > 1:1520418/1‑150 (MQ=255) | GGGACCATGGCCATTTCCGAGACATCGCTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAAC > NC_002947/5510486‑5510782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |