| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,510,662 | G→C | 5.2% | V99V (GTG→GTC) | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,510,662 | 0 | G | C | 5.2% | 510.4 / 13.5 | 153 | V99V (GTG→GTC) | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (70/75); new base C (4/4); total (74/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
CTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCA > NC_002947/5510513‑5510811 | aaGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTggac > 2:4933492/1‑148 (MQ=255) aaGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGcc < 2:1587360/150‑1 (MQ=255) aGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCg > 1:172501/1‑150 (MQ=255) ggACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgt < 1:3077441/150‑1 (MQ=255) aCATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtgg < 1:1347366/150‑1 (MQ=255) cATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtggt < 2:3815460/150‑1 (MQ=255) ggCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGtt < 1:859491/150‑1 (MQ=255) gcgcTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTc < 2:2812089/150‑1 (MQ=255) gcgcTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCAGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTc < 2:2639592/150‑1 (MQ=255) cTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgc > 2:2945204/1‑150 (MQ=255) tgatgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgct > 2:709477/1‑150 (MQ=255) gatgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctg > 2:4130937/1‑150 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 2:3603918/150‑1 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 2:2129117/150‑1 (MQ=255) tgaCCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctgct < 2:2129080/150‑1 (MQ=255) cATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGAc > 1:3406583/1‑150 (MQ=255) aTCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACa > 2:2313135/1‑150 (MQ=255) gAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATcc < 2:2483879/150‑1 (MQ=255) gAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATcc < 2:1072225/150‑1 (MQ=255) aGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCg > 2:1714191/1‑150 (MQ=255) gCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgt < 1:3294987/150‑1 (MQ=255) cAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACCAAGTGGCCGTGGTGTTCGgctg > 2:4031858/1‑137 (MQ=255) cAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGgctg < 1:4031858/137‑1 (MQ=255) aGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgtgt < 2:1734871/150‑1 (MQ=255) aGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCgtgt < 2:2909572/150‑1 (MQ=255) cAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgcg > 1:1668118/1‑150 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTcgc < 2:4790061/148‑1 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCgcgc > 2:3557888/1‑150 (MQ=255) aaCGCCAAGGGTGGCGTGAACGGCAAGATGCTCGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCgcgc > 2:3557877/1‑150 (MQ=255) cGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCaa < 2:2518827/150‑1 (MQ=255) gCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAg > 2:1810689/1‑150 (MQ=255) ccAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGTGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGt < 1:1363134/150‑1 (MQ=255) ccAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGt < 2:4395536/150‑1 (MQ=255) ccAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGt < 2:4395490/150‑1 (MQ=255) cAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtgg < 1:1446243/116‑1 (MQ=255) cAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgtgg > 2:1446243/1‑116 (MQ=255) cAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTc > 2:240438/1‑150 (MQ=255) aaGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCt < 2:637202/150‑1 (MQ=255) gCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGc > 2:732347/1‑150 (MQ=255) gCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGc > 2:2763395/1‑150 (MQ=255) gTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCg > 1:4195718/1‑150 (MQ=255) aCGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGgtgt < 1:4980670/150‑1 (MQ=255) ggCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTc < 2:4960444/150‑1 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa < 1:254430/150‑1 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa > 1:3190422/1‑150 (MQ=255) aaGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaa < 1:3925074/150‑1 (MQ=255) gATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCgaaga > 1:4386524/1‑150 (MQ=255) tGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAAc > 1:776702/1‑150 (MQ=255) tGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCa > 2:3436776/1‑150 (MQ=255) ggAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAAcaccg < 1:732373/150‑5 (MQ=255) gAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAAc > 1:2605474/1‑150 (MQ=255) ccGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGc < 2:3000484/150‑1 (MQ=255) ggtggtCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCctgct < 2:2605474/150‑1 (MQ=255) tCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCTACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGtt < 2:5204281/113‑1 (MQ=255) tCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCGACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGtt > 1:5204281/1‑113 (MQ=255) gACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTAc > 2:591744/1‑150 (MQ=255) gACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTAc < 1:2990344/150‑1 (MQ=255) cGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCgg > 2:3313176/1‑150 (MQ=255) gCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgt > 1:4599057/1‑65 (MQ=255) gCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCgt < 2:4599057/65‑1 (MQ=255) tCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGgt > 1:2688440/1‑110 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 2:4284947/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 2:776702/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 1:252323/150‑1 (MQ=255) cAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTa < 1:252363/150‑1 (MQ=255) tGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAg < 2:278135/150‑1 (MQ=255) gCCGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAagg > 1:4133602/1‑150 (MQ=255) cGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCg > 1:710358/1‑150 (MQ=255) cGCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAaggtg > 1:4971632/1‑148 (MQ=255) gCTCTTCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGa < 2:1111401/150‑1 (MQ=255) cTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGaa < 1:240438/150‑1 (MQ=255) gTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAaga < 1:2763395/150‑1 (MQ=255) ttCGCTGAAAAGGCGCGCCAGCTGATTTCTCAGGATAAGGTCGCAGCCGTGTTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAggaa > 1:4420799/1‑149 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCa > 2:3749085/1‑107 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCa < 1:3749085/107‑1 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGAt < 2:229393/150‑1 (MQ=255) cGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGAt < 2:5179273/150‑1 (MQ=255) gCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATg > 1:3583574/1‑150 (MQ=255) cTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGt < 2:349119/150‑1 (MQ=255) gAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTCCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCg < 1:1978327/150‑1 (MQ=255) aaaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGt > 1:2472768/1‑129 (MQ=255) aaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGcc < 1:3451639/150‑1 (MQ=255) aaCTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCt > 1:3586969/1‑150 (MQ=255) aCTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTa > 1:3159329/1‑150 (MQ=255) tgctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTCTGAGGGCGAaga > 1:2830197/1‑127 (MQ=255) tgctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGc > 1:66878/1‑122 (MQ=255) tgctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAaga < 2:2830197/127‑1 (MQ=255) tgctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTaca > 2:2090652/1‑150 (MQ=255) ctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCaa < 1:839555/86‑1 (MQ=255) ctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTAcaca < 2:4777762/150‑1 (MQ=255) tgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAg > 2:2560809/1‑150 (MQ=255) tgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAg > 1:2256943/1‑150 (MQ=255) aCCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgc > 2:1234492/1‑150 (MQ=255) ccAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgcgc > 1:2967894/1‑150 (MQ=255) ccAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgcgc < 2:3716216/150‑1 (MQ=255) ccAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgcgc > 2:1802853/1‑150 (MQ=255) aaaGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCg > 2:1088833/1‑150 (MQ=255) gTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAAc < 2:3607468/150‑1 (MQ=255) tGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAAcc > 1:1300329/1‑150 (MQ=255) tGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTAGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAAcc > 2:5121353/1‑150 (MQ=255) | CTCAAGGACATGGCGCTGATGACCATCGAGCAGATCAACGCCAAGGGTGGCGTGAACGGCAAGATGCTGGAACCGGTGGTGGTCGACCCGGCGTCCAACTGGCCGCTGTTCGCTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCA > NC_002947/5510513‑5510811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |