| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,510,774 | T→G | 7.8% | S137A (TCG→GCG) ‡ | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,510,774 | 0 | T | G | 7.8% | 534.8 / 27.4 | 166 | S137A (TCG→GCG) ‡ | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (90/63); new base G (7/6); total (97/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
CTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATCCTG > NC_002947/5510625‑5510923 | cTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGt < 2:349119/150‑1 (MQ=255) tGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTc < 2:3568342/150‑1 (MQ=255) gAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTCCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCg < 1:1978327/150‑1 (MQ=255) aaaaGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGc < 2:279065/150‑1 (MQ=255) ccGACAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACgt > 1:3979186/1‑150 (MQ=255) aaCTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCt > 1:3586969/1‑150 (MQ=255) ctgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTAcaca < 2:4777762/150‑1 (MQ=255) tgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAg > 2:3727896/1‑150 (MQ=255) tgACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAg > 1:2256943/1‑150 (MQ=255) tgACCCAGGACAAAGTGGCCGTGGTGGTCGGCTGCTGGACAGCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAg > 2:2560753/1‑150 (MQ=255) aCCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgc > 2:1234492/1‑150 (MQ=255) ccAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGgcgc < 2:3716216/150‑1 (MQ=255) aCAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGccc < 2:4386524/150‑1 (MQ=255) aaaGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCg > 2:1088833/1‑150 (MQ=255) tGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAAcc > 1:1300329/1‑150 (MQ=255) ggCCGTGGTTTTCGGCTGCTGGACATCCGTGTCGAGCAAGTCTGTTCTGAAGGTGTTAGAAGAACTAAACTGAATGCTGTTCTACAAGGTGCAGTATGAGGTCGAATAGATGTCGCCTAACGTGTTCTACAAAGGAGACGCCCCTAAACa > 2:2630234/1‑150 (MQ=255) cGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCa > 2:2079276/1‑150 (MQ=255) cGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCa > 1:3433527/1‑150 (MQ=255) agccgtgtTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAGGAATCCGAGCGCAACGTTTTCTATACGGGCGCGGCACCGAACCAGCa < 1:1709933/146‑1 (MQ=255) gtggtgTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCaa < 1:5083129/150‑1 (MQ=255) cgtgtTCGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAGGAATCCGAGCGCAACGTTTTCTATACGGGCGCGGCACCGAACCAGCAGGc > 1:4157793/2‑150 (MQ=255) tCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATcc < 1:5193582/150‑1 (MQ=255) tCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATcc < 1:591744/150‑1 (MQ=255) cGGTTGCTGGACGTCGGTGTCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAGGAATCCGAGCGCAACGTTTTCTATACGGGCGCGGCACCGAACCAGCAGGCAATccc < 2:2283227/150‑1 (MQ=255) tgctgGACATCCGTGTCGCGCTAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGcc < 1:2892864/150‑1 (MQ=255) tgctgGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGcc > 2:2208667/1‑150 (MQ=255) tgGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTg < 2:172501/150‑1 (MQ=255) tgGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTg > 2:1921545/1‑150 (MQ=255) gACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGa > 1:5442699/1‑150 (MQ=255) aTCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATa > 1:785913/1‑150 (MQ=255) aTCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATa > 2:4277400/1‑150 (MQ=255) cggtgtCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAGGAATCCGAGCGCAACGTTTTCTATACGGGCGCGGCACCGAACCAGCAGGCAATCCCTGCTGTTGACTatc < 1:793379/148‑3 (MQ=255) cggtgtCGCGCAAATCGGTTCTCCCGGTCTTCAAGGAACTCAACAATATTCTGTTCTACCCGGTGCAGTATGAAGGTGAGGAATCCGAGCGCAACGTTTTCTATACGGGCGCGGCACCGAACCAGCAGGCAATCCCTGCTGTTGACTatc > 1:1093673/3‑148 (MQ=255) ccGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATAcc > 1:2448142/1‑150 (MQ=255) ccGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATAcc > 1:702789/1‑150 (MQ=255) cGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCt < 1:1810689/150‑1 (MQ=255) gtCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCtgat < 1:4450277/150‑1 (MQ=255) tCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCtgatg > 1:1081113/1‑150 (MQ=255) tCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCtgatg > 1:3567800/1‑150 (MQ=255) gcgcAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGACTACCTGATGAg > 2:3932390/1‑150 (MQ=255) cgcAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGc < 1:4807774/150‑1 (MQ=255) cAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGa < 1:2208667/150‑1 (MQ=255) tCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGAc > 2:3578625/1‑150 (MQ=255) tGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGAcgg < 1:1165634/150‑1 (MQ=255) cTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACggcggc > 1:2682595/1‑150 (MQ=255) ccGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAgc < 2:3406583/150‑1 (MQ=255) ggTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAgcgc < 1:2945204/150‑1 (MQ=255) ttCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAg > 1:2205795/1‑150 (MQ=255) cGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCa > 2:1581292/1‑146 (MQ=255) cGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCa < 1:1581292/146‑1 (MQ=255) gaagaaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAgcgc > 1:4314188/1‑150 (MQ=255) gaagaaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAgcgc > 1:3519293/1‑150 (MQ=255) aagaaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGct < 1:1677545/150‑1 (MQ=255) aagaaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGct > 1:3089163/1‑150 (MQ=255) gaaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGcttc > 1:4942008/1‑150 (MQ=255) aaCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGAGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCTTGGAATACCAGATGAGCGAGGACGGCGGCAGCGCCAAGCGcttct > 1:5303415/1‑150 (MQ=255) aCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGcttctt > 2:787686/1‑150 (MQ=255) aCTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGcttctt > 2:4087941/1‑150 (MQ=255) cTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTATACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCttcttc < 1:3557888/150‑1 (MQ=255) tCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCa > 2:4805207/1‑132 (MQ=255) tCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCa < 1:4805207/132‑1 (MQ=255) tCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTcc > 2:454502/1‑150 (MQ=255) aaCGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAgcgc > 1:101661/1‑141 (MQ=255) aaCGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAgcgc < 2:101661/141‑1 (MQ=255) aCGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCaa > 1:2916192/1‑86 (MQ=255) gCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGt < 1:5380444/97‑1 (MQ=255) gCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGt > 2:5380444/1‑97 (MQ=255) gctgTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCAc < 2:4942008/150‑1 (MQ=255) gTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGa < 2:79715/150‑1 (MQ=255) aacTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGAc > 1:3427843/3‑150 (MQ=255) tACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTAc > 2:5023166/1‑150 (MQ=255) tACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTAc > 1:134509/1‑150 (MQ=255) tACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTAc > 2:3626385/1‑150 (MQ=255) tACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTAc < 2:3430674/150‑1 (MQ=255) cccGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCctgctg < 1:3091124/136‑1 (MQ=255) cccGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGt < 2:4195718/150‑1 (MQ=255) cccGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGt > 1:849550/1‑150 (MQ=255) ccGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTa > 2:2342982/1‑146 (MQ=255) ccGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTa < 1:2342982/146‑1 (MQ=255) ggTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTa > 2:3654870/1‑150 (MQ=255) gTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTAc < 2:2930767/150‑1 (MQ=255) gTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTAc < 1:2507104/150‑1 (MQ=255) gTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTAc > 2:635637/1‑150 (MQ=255) aGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCAc > 1:2470191/1‑150 (MQ=255) gTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACg > 1:1559010/1‑150 (MQ=255) tATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGc < 1:3436776/150‑1 (MQ=255) gAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGcacc > 2:3282007/1‑150 (MQ=255) gAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGcacc > 2:3281939/1‑150 (MQ=255) gggCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGcaccac < 1:1234492/150‑1 (MQ=255) aaGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACcaaca < 1:3696854/150‑1 (MQ=255) aaGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACcaaca < 1:794008/150‑1 (MQ=255) agagATGTTGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACcaacaa < 2:3119883/150‑1 (MQ=255) gagaTGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAg < 1:3313171/150‑1 (MQ=255) aTGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATc < 1:2090652/150‑1 (MQ=255) gTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATCCt < 2:3159329/150‑1 (MQ=255) gTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATCCt < 2:820805/150‑1 (MQ=255) gTCGCAGATCGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATctt < 2:4316618/150‑3 (MQ=255) tCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCCTCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCCACAAGATCCTg > 2:245208/1‑150 (MQ=255) tCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGcc > 2:2671284/1‑90 (MQ=255) tCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCAAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATCCTg < 2:5130429/150‑1 (MQ=255) | CTGAAAAGAGCCGTCAACTGCTGACCCAGGACAAAGTGGCCGTGGTGTTCGGCTGCTGGACATCCGTGTCGCGCAAGTCTGTTCTGCCGGTGTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTATGAGGGCGAAGAGATGTCGCCGAACGTGTTCTACACAGGCGCCGCCCCGAACCAGCAAGCCATCCCGGCCGTGGAATACCTGATGAGCGAGGACGGCGGCAGCGCCAAGCGCTTCTTCCTGCTGGGCACCGACTACGTCTACCCACGCACCACCAACAAGATCCTG > NC_002947/5510625‑5510923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |