Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,539,038 A→G 14.2% intergenic (+45/+58) nadE → / ← PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,539,0380AG14.2% 240.5 / 25.6 99intergenic (+45/+58)nadE/PP_4870NH(3)‑dependent NAD(+) synthetase/azurin
Reads supporting (aligned to +/- strand):  ref base A (36/45);  new base G (5/9);  total (41/58)
Fisher's exact test for biased strand distribution p-value = 7.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.69e-01

Only 100 of 104 total aligned reads displayed.

GATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAA  >  NC_002947/5538889‑5539186
                                                                                                                                                     |                                                                                                                                                    
gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                      <  1:2248310/150‑1 (MQ=255)
 aTGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAATGGCCTGCAGGAGCGGGGTGACCCCCGGAGACCAGGGTGGAc                                                                                                                                                     >  1:4126656/1‑150 (MQ=255)
   gCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAAccc                                                                                                                                                   >  2:288998/1‑150 (MQ=255)
      ttCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGACGGGGAAccccac                                                                                                                                                >  2:2028311/1‑147 (MQ=255)
      ttCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTGACCCCCGAATACGAGGGTGAACCCAcc                                                                                                                                                >  1:1222903/1‑150 (MQ=255)
        ccTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGa                                                                                                                                              <  2:2256050/150‑1 (MQ=255)
         cTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGAc                                                                                                                                             <  2:979780/150‑1 (MQ=255)
         cTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGAc                                                                                                                                             <  2:1904489/150‑1 (MQ=255)
         cTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGAc                                                                                                                                             <  1:2014460/150‑1 (MQ=255)
          tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGAcc                                                                                                                                            >  2:5157879/1‑149 (MQ=255)
           gCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGc                                                                                                                                           <  2:1255030/150‑1 (MQ=255)
            cATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCa                                                                                                                                          <  2:4129814/150‑1 (MQ=255)
              tGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCAtt                                                                                                                                        >  2:2639143/1‑150 (MQ=255)
                 gCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc                                                                                                                                     <  1:567295/150‑1 (MQ=255)
                 gCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc                                                                                                                                     <  1:3690115/150‑1 (MQ=255)
                  cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                                    <  2:1781268/150‑1 (MQ=255)
                  cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                                    <  2:1780943/150‑1 (MQ=255)
                   cgCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:5052655/149‑1 (MQ=255)
                   atctggTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCGGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  1:4717351/146‑1 (MQ=25)
                   aGCCGGTTGACCTGGGAGCGTTCGACATCATCGTCGCCACCTTCCGCAAGACCCAGCTCAAGCGGGAACTGCGGTTCGCTCGTTGATAAGTGGCCTGCTGGAGCGGGTTGACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:5281009/150‑1 (MQ=18)
                   aGCCGGTTGACCTGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:700047/150‑1 (MQ=255)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  1:1209940/150‑1 (MQ=25)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:5281221/150‑1 (MQ=25)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  1:2070572/150‑1 (MQ=25)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  2:4639361/150‑1 (MQ=255)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  2:3255365/150‑1 (MQ=255)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:2028869/150‑1 (MQ=255)
                   aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:5052653/150‑1 (MQ=255)
                    gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCggg                                                                                                                                  <  2:1721282/150‑1 (MQ=25)
                    gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  >  2:4873279/1‑150 (MQ=255)
                     ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                                 <  1:4969447/150‑1 (MQ=255)
                     ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                                 <  1:238850/150‑1 (MQ=255)
                     ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                                 <  1:238580/150‑1 (MQ=255)
                     ccGGTTGACCAGGCAGCGTTCGACAGCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                                 <  1:1169218/150‑1 (MQ=255)
                        gTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGaa                                                                                                                              <  1:2395111/150‑1 (MQ=25)
                        gTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                      >  2:1210740/1‑126 (MQ=255)
                        gTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                      <  1:1210740/126‑1 (MQ=255)
                             ccAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCACGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGc                                                                                                                         <  1:2262743/150‑1 (MQ=255)
                                 gCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTGATAAGTGGCCTGCAGGAGCGGGGTGACCCGCGGATAAGAGGGTGTGCCCCCCCACCCATTAGCGGGGGGTCCCGCGccag                                                                                                                    >  1:2916845/1‑148 (MQ=255)
                                   aGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  <  2:3829549/135‑1 (MQ=255)
                                   aGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  <  2:3829676/135‑1 (MQ=255)
                                   aGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  >  1:3829549/1‑135 (MQ=255)
                                   aGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  >  1:3829676/1‑135 (MQ=255)
                                    gctttCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCTGGAGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCa                                                                                                                  <  2:5294301/147‑1 (MQ=255)
                                     cGTTCGACATCATCGTCGCCACCACCCCCAAGACCCAGCACACGCGCGAACTGCCGTTCGCTCCTTGATACGTGGCCGGCTGGAGGGGGTTCCCCGGCGAATACGCGGGTGAACCCACCGACGAATTCGGGGGTGAACCCGCTCCTGCAg                                                                                                                 <  2:3425047/150‑1 (MQ=255)
                                        tCGACATCTCCGCCCCCACCTCCCGCCAGACCCAGCACAAGCGCGACCTGCCGTTCGCGCCTGGATTCGTGGCCGGCAGGCGGGGTTTCACCCGCTACTACGTGGGTGAACCCACCGCGGCATGCGGGGTTGACCCCGCTCCTGCAGGGt                                                                                                              <  2:3559569/150‑1 (MQ=255)
                                          gACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   >  1:5114290/1‑127 (MQ=21)
                                          gACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:5114290/127‑1 (MQ=21)
                                               catcGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATAAGAGGGTGAAACCACCGAAGCATTAGCGGGTGGACCCGCACCTGCCGGGTTCGCCGt                                                                                                       >  2:1668727/1‑150 (MQ=255)
                                                               cGCAAGACCCAGCACAAGCGCGACCTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATCCGTGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACtt                                                                                       <  1:4078089/150‑1 (MQ=255)
                                                                 catgACCCCGCACACGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGTGGGTGAACCCACCGACGCATTCGCGGTTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGa                                                                                     <  1:5449944/147‑1 (MQ=38)
                                                                 cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   >  1:1274288/1‑104 (MQ=17)
                                                                 cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:1274288/104‑1 (MQ=17)
                                                                 cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCAACCGCGAATACGAGGGTGTACCCACCCACGCATTCGCGGGTGAACCCGCACCTGCAGGGTTCGCCGTCAGCCGGTGATTAATTGa                                                                                     >  2:1222939/1‑150 (MQ=255)
                                                                 cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTGACCCGCGAATACGAGGGTGAACCCCCCGACGCAGTCGCGGGTGAACCCGCGCCTGCAGGGTTCGCCGTCAGCCTTTGGTTACGTGa                                                                                     >  2:4676963/1‑150 (MQ=255)
                                                                  aaGACCCAGCACACGCGCGACCGGCCGTTCGCTCCTTTATATGTGGCCTGCTGGTGGGGGTTCACCGGCGAATACGCGGGTCAACCCCCCGACGCATCCGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGAc                                                                                    <  2:921112/150‑1 (MQ=255)
                                                                        cAGCACACGCGCTAACTGCCTTTCGCTCCTTTATATGTGGCCTGCTGGAGGGGTTTCACCCGCTAATACGAGGGTGAACCCACCGAGGCTTTCGCGGTTTAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGAc                                                                              <  2:626301/150‑1 (MQ=255)
                                                                         aGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGAcc                                                                             <  2:4940262/150‑1 (MQ=255)
                                                                           cacaCGCGCGAAGTGCGGTGCGCTCATTGATATGGGGCGTGCTGGTGGGGGTACACCCGCTAATAGGTGGTTTACCCACCCGACGAATTCGGGGTTTACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                           <  1:5276240/150‑1 (MQ=255)
                                                                           cacaAGCGCTAACTGCCGTTCGCTCTTTTTCATGTGGCCTGCTGGCGGGGGTTCCCCGGCTAATACGTGGGTGAACCCACCGCCGCATTCGCGGGTCAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                           <  1:3271230/150‑1 (MQ=255)
                                                                           cacaAGCGCGAACTGCCGTTCGCTCCTTTATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTTAACCCACCGACGCAGTCGCGGGAGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                           <  2:4193645/150‑1 (MQ=255)
                                                                               cgcgcTAACTGCCTTTCGCTCCTTGATAAGTGCCGTGCTGGAGGGGTTTCACCCGCTAATACGTGGGTTAACCCACCGCCGCATTGGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCt                                                                       <  1:3963435/149‑1 (MQ=255)
                                                                               cgcgcTAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGCGCGGGTTCACCCGCTATTAGTAGGGTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCt                                                                       <  2:1311538/149‑1 (MQ=255)
                                                                                  gcgAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGCATACCAGGGTGAACCCCCCCCCCCCGTCGCGGGGGAACCCCCGCCAGCAGGGGTCGCCCGCAGCCGTTGATTAAGTGGCGATGACCATGccgatc                                                                    >  2:68006/1‑146 (MQ=255)
                                                                                    gAAGTGCCGTTCGCTCCTTGATATGTGGCCTGCTGGAGCGGGTTCACCGGCGAATACGTGGTTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtcat                                                                  <  2:5185984/150‑1 (MQ=39)
                                                                                    gAACTGCGGTGCGCTCCTTGATACGTGGCCTGCCGGTGCGGGTTCACCCGCGAATACGCGGGTGACCCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtcat                                                                  <  2:1097833/150‑1 (MQ=38)
                                                                                        ggCCGTTCGCTCCTTGATAAGGGGCCTGCAGGCGCGGGTTCACCCGCCAATACGCGGGTGAACCCACCGACGCATTCGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCatcatc                                                              <  1:3502319/149‑1 (MQ=38)
                                                                                         gccttgcGCTCCTTTTTAGGTGGCTTGCCGGAGCGGGTACACCGGGGATTAGTTGGTTGAACCCCCGGACGATTTGGCGGTTGACCCCGCTCCTGCAGGGTTCGCCGTCATCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCg                                                             <  2:929634/144‑1 (MQ=255)
                                                                                          ccGTTCGCTCCTTGATAAGTGGCCTGCCGGAGCGGGTTCACCCGCGACTACGCGGGTGAACCCACCGACGCATGCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCga                                                            <  1:3623836/150‑1 (MQ=255)
                                                                                                    cTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGAAAACGAGGGTGAACCCCCCGACGCATTAGCGGGTGAACCCCCTCCGGCAGGGGTCGCCCTCAGCCGGTGATTACTTGACGCTGACCGTGCCGTTCATCAACGAGATGTGGccc                                                  >  2:3952404/1‑150 (MQ=255)
                                                                                                                ccTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCCCTCCTGCAGGGTTCACCGTCAGCCTTTGTTTACTTGACCATGACCATGCCGTTCATCATCGAGATGTGGCCCGGGAAGGTGCag                                      >  2:2566713/1‑150 (MQ=37)
                                                                                                                    ccggAGCGGGTTCACCCGCGAATCCGCGGGTCAACCCACCGCCGCCTGCGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCagaaga                                  <  2:4126656/148‑1 (MQ=255)
                                                                                                                      ttcgCGGGTGAACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGaagaag                                >  1:964018/4‑150 (MQ=255)
                                                                                                                        tggggtttCACCGGCTAATTCGTGGTTTAACCCACCGACGATTTGGGGGGTTAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCt                              <  2:1504980/144‑1 (MQ=255)
                                                                                                                          gggggTCACCCGCTAATACGGGGGTGACCCCACCGACGCTGTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGt                            <  2:4800236/149‑1 (MQ=255)
                                                                                                                             gTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                         >  2:3097014/1‑150 (MQ=25)
                                                                                                                             gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                         >  2:2658610/1‑150 (MQ=255)
                                                                                                                              ttCACCCTCGTATTCGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc                        >  1:1501241/1‑150 (MQ=255)
                                                                                                                              ttCACCCTCGTATTCGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc                        >  1:1764415/1‑150 (MQ=255)
                                                                                                                                 aCCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                     >  1:5357872/1‑150 (MQ=25)
                                                                                                                                 aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                     >  2:2203105/1‑150 (MQ=255)
                                                                                                                                   ccGCTAATACTCGGTGGAACCCCCCGACGCTTGCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGGcaccac                   <  1:2624361/150‑1 (MQ=255)
                                                                                                                                   ccGCGAATCCGCGGGTCAACCCACCGACGCTTTCGCGGGTGAACCCGCTCCTGCAGGGTTCACCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   <  1:2566713/150‑1 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:3793567/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:3624479/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  2:5132451/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:2176005/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:3192215/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCGTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:202571/1‑150 (MQ=255)
                                                                                                                                         attcgcgggTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt             >  1:5211330/7‑150 (MQ=255)
                                                                                                                                         attcgcgggTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt             >  1:2486773/7‑150 (MQ=255)
                                                                                                                                         aTACGCGGGTGAACCCACCGACGCTTCCGCGGGTCACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt             <  1:3352864/150‑1 (MQ=255)
                                                                                                                                             gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  1:2799664/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  1:351790/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  1:2820262/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGAACACACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  1:3048867/1‑150 (MQ=255)
                                                                                                                                               gggTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCt       >  2:4397750/1‑150 (MQ=255)
                                                                                                                                                 gTGACCCCACCGACGCAGACGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTg     <  1:5294658/150‑1 (MQ=255)
                                                                                                                                                    aaCCCACCGCCGCATGGGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGaa  <  1:2028311/150‑1 (MQ=255)
                                                                                                                                                    aaCCCACCGCCGCACTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGaa  <  2:3133765/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAA  >  NC_002947/5538889‑5539186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: