| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,559,898 | C→A | 5.0% | intergenic (‑296/+35) | PP_4888 ← / ← purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,559,898 | 0 | C | A | 5.0% | 430.8 / 6.4 | 131 | intergenic (‑296/+35) | PP_4888/purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base C (61/63); new base A (2/5); total (63/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAGCT > NC_002947/5559749‑5560047 | gCTCATACACGGGCCTGCGCCCAACCTTGGTTGTGTGCCCACTTAGGCGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTtctc < 1:4461748/150‑1 (MQ=37) cTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATCGGCGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCa < 1:4472288/150‑1 (MQ=255) cTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCa < 2:2130896/150‑1 (MQ=255) tCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAg < 2:3860511/150‑1 (MQ=255) ccTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGGGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAgg < 2:3762636/150‑1 (MQ=255) cTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAggg > 1:5376626/1‑150 (MQ=255) cTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAggg > 1:2392937/1‑150 (MQ=255) tACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGc > 2:2710206/1‑150 (MQ=255) ccccggccggcGCCCACCCCTCGTTGTGTGCCCACCTCGGCGCGGGTTTACCC‑GCGAATACGGTCGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCCGGGCcg < 2:201828/147‑1 (MQ=37) caccGGCCTGCGCCCAACCATGGTTGTGTGCCCACATCGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCcg < 2:201833/147‑1 (MQ=255) aaCGGCCTGCGCCCAACCCTCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGACTACGGTAGCGGCGGCAACGGGGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACACAGGAAAACGCCGCGGCCCTGCTCCGGGCcgc > 2:2159255/1‑150 (MQ=38) aaCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCcgc > 2:5159743/1‑150 (MQ=255) aaCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCcgc > 1:993492/1‑150 (MQ=255) aaCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCcgc > 2:937452/1‑150 (MQ=255) ccGGCGTGCGCCCAACAATGGTTGTGTGCCCACATCGGTGCGGTTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg < 1:418939/149‑1 (MQ=37) ccGGCCTGCGCCCAACCATGTTTGTG‑GCCCAAATTGGGGGGGGTTTTCCCGGCGAATAGGGTAGGGGCGGCAACGGTGGTTTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg < 1:276631/149‑1 (MQ=255) accgcatGCGCACAACAATCGTTGTGTGCCCAAATAGGAGCGGGTTAACCC‑CCCAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg < 2:2870816/144‑1 (MQ=37) cgcccggcgcCCACCCATGTTTGTGTGCACAATTTGTCGGGGTTTTACCC‑GCGAATAGGGTTGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCAACAAATCAAAACGCCGCGGCCCGGAGAAGGGCCgcgg < 2:2311979/144‑1 (MQ=255) ggCCTGCACCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCgcggc < 2:5234271/150‑1 (MQ=255) cTGCGCCCACCCTTGTTTGTGTGCCCACATCGGAGGGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAAGGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTc < 2:1584918/150‑1 (MQ=38) ccAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCa > 1:1002360/1‑150 (MQ=255) ccAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCa > 1:4345795/1‑150 (MQ=255) aaCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGtt < 2:2519524/142‑2 (MQ=255) aaCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGtt > 1:2519524/1‑141 (MQ=255) aaCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGc > 2:5323960/1‑150 (MQ=255) ccATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCt < 2:3684745/150‑1 (MQ=255) ggtgggCCCACTTGGGCGGGGGTTAACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATTTTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGc < 1:2675438/149‑1 (MQ=38) gtgtgCCCACTTCGGAGGGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAGAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCa < 2:2965695/150‑1 (MQ=255) gtgtgCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCa < 2:1338175/150‑1 (MQ=255) cccACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCa > 2:2996356/1‑150 (MQ=255) cacaTTCGAGGGGGTTAACCC‑CGGATAAGGGGAGCGGCGTCAACTGTGGATTACCGGTGGATATTGGCCAGCACAGACATGACCACAAATGAAAACGCGGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAgg < 2:4330699/150‑1 (MQ=255) cacaTAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAgg < 2:3141794/150‑1 (MQ=255) aGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAAc > 2:1164470/1‑150 (MQ=255) aGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAAc > 2:907883/1‑150 (MQ=255) ttcgCGGGTAAACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGGTATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACg > 1:2955463/4‑150 (MQ=255) gAGGGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACgg < 2:3302333/150‑1 (MQ=255) aGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACggg > 2:4734433/1‑150 (MQ=255) ggTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGGCAGATCAGCCAGGAAGGCAGATCAGGCGAACGGGTGAc > 1:1824813/1‑150 (MQ=255) ggTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCGTCTCAGGGCCGCGGCGTCAGATCAGCCGGGAAGGCAGATCAGGCGAACGGGTGAc > 1:1824708/1‑150 (MQ=255) gTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACg > 2:960797/1‑150 (MQ=255) gTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACg > 1:3400088/1‑150 (MQ=255) cc‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCAc > 2:5302360/1‑150 (MQ=255) cc‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCAc > 2:1450343/1‑150 (MQ=255) gctaaTACGGTAGGGGCGGCAAGGGTGGATTACGGGTGTATATTGGCCAGAACAGAAATGCCCAAAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGa < 1:2773550/147‑1 (MQ=255) gcgAATACGGTAGCGGCGGCAACGGTGGATTACGGGTGTATATTGGCCAGCACAGACTTGCCCAAAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGa < 1:2773290/150‑1 (MQ=255) cgAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGAt < 1:5439568/150‑1 (MQ=255) atccGGTCGCGGCGGAAAGGGTGGATTCCGGGTGTATTGTGGCCAGCAAAGACATGCCCACAAAGGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGt < 1:4599608/147‑1 (MQ=255) aTACGGTAGCGGCGGAAAGGGTGTATTACGGGTGTATTTTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGt < 1:3325353/150‑1 (MQ=255) cGGTAGCGGCGGCAAGGGTGTATTACGGTTGTATATTGGCAAGCACATACTTGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGtctc < 1:1019821/150‑1 (MQ=255) gTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGt < 2:3160286/150‑1 (MQ=255) tAGCGGCGGCAAGGGTGGATTCCGGGTGCATATTGCCCAGCACAGACATGCCCACAAATCAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGtt < 1:3203148/150‑1 (MQ=255) gcAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCg > 1:2166027/1‑150 (MQ=255) gcAACGGTGGATGACGGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCg < 2:1876066/150‑1 (MQ=255) ttgATTACCTGTGGATATTGGACAGCACAGACATGCCGACACATGAAATCGCCGCGGCCCTTCTCAGGGCCGCGGCGTCATATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCCCGATGGTCTCTTTGCGGTCCGGGCCGGt < 2:3833725/148‑1 (MQ=255) ggATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTc < 2:1267638/150‑1 (MQ=255) gATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCg < 2:1067024/150‑1 (MQ=255) ttACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGaa < 2:2750648/150‑1 (MQ=255) tACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGaaa < 2:649777/150‑1 (MQ=255) gTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCATCTCAGGGCCGCGGCGTCAGATCAGCCAGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATTGTCTCGTTTCGGTCCGGGCCGGTCGAAatgatg > 1:184897/1‑150 (MQ=255) gggATATTGGCCAGCACAGACTGGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGCCGAAATGATGt < 1:4152798/149‑1 (MQ=255) ggATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGGCGAAATGATGTc > 1:4214937/1‑150 (MQ=255) atatTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGa > 1:345792/1‑150 (MQ=255) atatTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGa < 2:4922179/150‑1 (MQ=255) atatTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGa > 1:3075401/1‑150 (MQ=255) ttttGGCCAGCACACACAGCCCCAAAAATGAAAACGCCGCGGCCCTTCTCTGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGAt < 1:4567592/148‑1 (MQ=255) tatTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGAt > 1:3963265/1‑150 (MQ=255) ttGGCCAGCACAGACAGGCCCACAAATTAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCg < 1:3653600/150‑1 (MQ=255) tGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCgg > 2:873818/1‑150 (MQ=255) ggCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGgc > 1:823048/1‑150 (MQ=255) ccAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGgcgc > 1:2173852/1‑150 (MQ=255) aGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATAAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAAcc > 1:2144647/1‑150 (MQ=255) aGACATGCCCACAAATGAAAACGCCGCGGCCCGTCTCAGGGCCGCGGCGGCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCCCGATGGTCTCGTTGCGGTCCGGGCCGGGCGAAAAGATGTCGAGCGGCGCGCCAAcc > 1:3804400/1‑150 (MQ=255) gACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCa < 1:3246087/150‑1 (MQ=255) ccACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTc > 2:3367664/1‑150 (MQ=255) cacaAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCtcgtcg > 2:4596166/1‑150 (MQ=255) cacaAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCg > 1:1655318/1‑150 (MQ=255) cacaAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCg < 2:1873193/150‑1 (MQ=255) caAATTAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGAt < 1:2282259/150‑1 (MQ=255) caAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGAt < 2:5376626/150‑1 (MQ=255) aaaTGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCGGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCGCTTCGATg > 1:2592585/1‑150 (MQ=255) tGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATgcgc < 2:3400088/150‑1 (MQ=255) gAAAACGCCGCGGCCCGTCTCAGGGCCGCGGCGTCAGATCAGCCGGGAAGGCAGATCAGGCGAACGGGTGACCCAGCCCGATGGTGGCGTTTCGGGCCCGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGAGgcgcg > 1:5218146/1‑149 (MQ=255) aaaCGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTg < 2:4351918/150‑1 (MQ=255) aaaCGCCGCGGCCCGTCGCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGCTGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCGTg > 2:611273/1‑150 (MQ=255) aCGCCGCGGCCCTGAGAATGGCCCCGGCGTCAGATAAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTAGTTGCGGTCCGGGCCGGTCGAAATGATTTAGATCGGCGCGCCAACCACCTCTTCGATGCGCTTGAt > 1:5010788/1‑150 (MQ=255) gccgcGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGt < 2:3591000/150‑1 (MQ=255) ccgcGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTa < 2:3105377/150‑1 (MQ=255) ccgcGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTa < 2:4464484/150‑1 (MQ=255) cgGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGgcgc > 1:1593969/1‑117 (MQ=255) cgGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGgcgc < 2:1593969/117‑1 (MQ=255) cgGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTc > 1:1813222/1‑150 (MQ=255) ccTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCAcgc > 1:4359295/1‑150 (MQ=255) cTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCAcgcg > 1:1331257/1‑150 (MQ=255) cTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCAcgcg > 1:911156/1‑150 (MQ=255) ttCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACgcgc > 2:2262517/1‑150 (MQ=255) tctcAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCa < 1:1482714/150‑1 (MQ=255) ctcAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAg > 2:811720/1‑150 (MQ=255) tcAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAGc > 2:2451380/1‑150 (MQ=255) tcAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAGc > 1:1260494/1‑150 (MQ=255) cAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAGCt > 1:4168689/1‑150 (MQ=255) | GCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCC‑GCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGCGCAGCT > NC_002947/5559749‑5560047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |