BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,613,989	G→C	5.6%	R337P (CGC→CCC) ‡	PP_4931 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,613,989	0	G	C	5.6%	656.2 / 19.1	196	R337P (CGC→CCC) ‡	PP_4931	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (103/82); new base C (8/3); total (111/85)
Fisher's exact test for biased strand distribution p-value = 3.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 201 total aligned reads displayed.

ATTGCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGGG  >  NC_002947/5613841‑5614138

   gCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCctg                                                                                                                                                   <  2:3368602/150‑1 (MQ=255)

        agcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt                                                                                                                                              >  2:4942661/1‑150 (MQ=255)

        agcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt                                                                                                                                              <  1:3090000/150‑1 (MQ=255)

             agAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGca                                                                                                                                         <  1:4476643/150‑2 (MQ=255)

               aaGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTgg                                                                                                                                       >  1:2360914/1‑150 (MQ=255)

                 ggAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGcc                                                                                                                                     >  1:4552726/1‑150 (MQ=255)

                   aaaTCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGa                                                                                                                                   <  1:5179539/150‑1 (MQ=255)

                      tCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt                                                                                                                                              >  1:4372265/1‑136 (MQ=255)

                      tCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt                                                                                                                                              <  2:4372265/136‑1 (MQ=255)

                      tCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCa                                                                                                                                >  2:2551472/1‑150 (MQ=255)

                        gACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCaaa                                                                                                                              <  1:96873/150‑1 (MQ=255)

                        gACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCaaa                                                                                                                              >  1:1962528/1‑150 (MQ=255)

                         aCAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAac                                                                                                                             >  2:1119073/1‑150 (MQ=255)

                          cAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAact                                                                                                                            <  2:1224124/150‑1 (MQ=255)

                               tgctgcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGGCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcac                                                                                                                       >  2:1929154/1‑150 (MQ=255)

                                  tgcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcactgg                                                                                                                    <  1:4813156/150‑1 (MQ=255)

                                  tgcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTAGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcactgg                                                                                                                    >  2:819479/1‑150 (MQ=255)

                                    ccATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAActggcactggca                                                                                                                  >  1:132404/1‑150 (MQ=255)

                                     cATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACtggcactggcac                                                                                                                 <  1:1645173/150‑1 (MQ=255)

                                      aTGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAcc                                                                                                                >  1:4609027/1‑150 (MQ=255)

                                         ggTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGa                                                                                                             >  2:1988905/1‑150 (MQ=255)

                                          gTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggtgg                                                                                                                                            >  2:3433378/1‑118 (MQ=255)

                                          gTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggtgg                                                                                                                                            <  1:3433378/118‑1 (MQ=255)

                                            cGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACtt                                                                                                          >  1:2319344/1‑150 (MQ=255)

                                              aTCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCa                                                                                                        <  1:4860417/150‑1 (MQ=255)

                                              aTCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCa                                                                                                        <  2:1733750/150‑1 (MQ=255)

                                                  gagCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGa                                                                                                    >  2:894726/1‑150 (MQ=255)

                                                      cTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCgg                                                                                                <  1:4942661/150‑1 (MQ=255)

                                                       tGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCggg                                                                                               >  2:2242908/1‑150 (MQ=255)

                                                         gTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCGCAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTa                                                                                             >  1:640819/1‑150 (MQ=255)

                                                              cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAg                                                                                        >  2:5168706/1‑150 (MQ=255)

                                                               tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCCGCAGCGCCGGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGc                                                                                       <  2:4195377/150‑1 (MQ=255)

                                                               tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGc                                                                                       <  1:751390/150‑1 (MQ=255)

                                                               tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGc                                                                                       >  2:1756876/1‑150 (MQ=255)

                                                                  gCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCAc                                                                                    >  2:5278808/1‑150 (MQ=255)

                                                                  gCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCAc                                                                                    <  2:3936692/150‑1 (MQ=255)

                                                                   ccACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCAcc                                                                                   >  1:3305295/1‑150 (MQ=255)

                                                                    cacaCTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCt                                                                                  >  1:107463/1‑150 (MQ=255)

                                                                    cacaCTGCGCGTCGACCGCGCTGAGCCTACACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggtg                                                                                                                                             <  1:1377280/91‑1 (MQ=255)

                                                                     acagTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGCCCAGCCGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTg                                                                                 <  1:742952/150‑1 (MQ=255)

                                                                       acTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggca                                                                                                                        >  1:1025376/1‑109 (MQ=255)

                                                                       acTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggca                                                                                                                        <  2:1025376/109‑1 (MQ=255)

                                                                          gcgcGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcact                                                                                                                      <  2:302424/108‑1 (MQ=255)

                                                                           cgcgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAgcgc                                                                           <  1:3999668/150‑1 (MQ=255)

                                                                            gcgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGcgcg                                                                          >  2:2610358/1‑150 (MQ=255)

                                                                            gcgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGcgcg                                                                          >  2:1841829/1‑150 (MQ=255)

                                                                             cgTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGa                                                                         >  1:1855332/1‑150 (MQ=255)

                                                                               tCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACg                                                                       >  1:3018380/1‑150 (MQ=255)

                                                                                  aCCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCa                                                                    >  1:12818/1‑150 (MQ=255)

                                                                                  aCCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCa                                                                    <  2:328438/150‑1 (MQ=255)

                                                                                    cgcgCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCAtt                                                                  >  2:1652054/1‑150 (MQ=255)

                                                                                     gcgcTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTc                                                                 <  2:2385363/150‑1 (MQ=255)

                                                                                        cTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTc                                                              <  1:2727716/150‑1 (MQ=255)

                                                                                         tGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTcc                                                             >  2:4733279/1‑150 (MQ=255)

                                                                                                gCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGca                                                      >  1:1826213/1‑150 (MQ=255)

                                                                                                  acaATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGcaca                                                    >  2:1855979/1‑150 (MQ=255)

                                                                                                      tCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTCATCAGCCACCGGGAGCGCGACGGCAGTCGTCCACAAGCACAGGcc                                                >  2:3151725/1‑150 (MQ=255)

                                                                                                      tCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGcc                                                >  2:829755/1‑150 (MQ=255)

                                                                                                        cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCa                                                                                                        >  2:84279/1‑92 (MQ=255)

                                                                                                        cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGa                                              >  2:4997467/1‑150 (MQ=255)

                                                                                                        cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGa                                              >  1:4778627/1‑150 (MQ=255)

                                                                                                        cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCGGCGGGTGGGCTGGCCGACCAAACGGGCACGGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGa                                              <  1:3679111/150‑1 (MQ=255)

                                                                                                          gCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACg                                                                       >  1:2122323/1‑123 (MQ=255)

                                                                                                            cTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTg                                          >  1:2861731/1‑150 (MQ=255)

                                                                                                             tGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                         <  1:5396909/150‑1 (MQ=255)

                                                                                                             tGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                         <  2:307646/150‑1 (MQ=255)

                                                                                                             tGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                         <  1:24323/150‑1 (MQ=255)

                                                                                                                 aCGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccga                                     >  2:1895366/1‑150 (MQ=255)

                                                                                                                  aggccGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTTGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccgac                                    >  2:195434/4‑150 (MQ=255)

                                                                                                                     ccGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGa                                                                                                             <  2:4592347/74‑1 (MQ=255)

                                                                                                                     ccGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTg                                 >  2:749181/1‑150 (MQ=255)

                                                                                                                        gACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCa                              >  2:4638915/1‑150 (MQ=255)

                                                                                                                         aCAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCAc                             <  1:1756876/150‑1 (MQ=255)

                                                                                                                           aaCGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGc                           >  1:4692544/1‑150 (MQ=255)

                                                                                                                           aaCGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACATGCCACGc                           >  2:2101999/1‑150 (MQ=255)

                                                                                                                             cGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCt                                  >  1:3183179/1‑141 (MQ=255)

                                                                                                                             cGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCt                                  <  2:3183179/141‑1 (MQ=255)

                                                                                                                                 ttccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCg                     >  1:5009810/1‑150 (MQ=255)

                                                                                                                                   ccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCt                   >  1:1461469/1‑150 (MQ=255)

                                                                                                                                    cttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTg                  >  2:4720266/1‑150 (MQ=255)

                                                                                                                                     ttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTgg                 <  2:2296945/150‑1 (MQ=255)

                                                                                                                                     ttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTgg                 <  1:4635605/150‑1 (MQ=255)

                                                                                                                                     gtGCCGACCAGCAGCGCCTGCGGGTGGGCTGGCCGACCACCCGGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCGCCGCTgg                 <  2:3707322/149‑1 (MQ=255)

                                                                                                                                      tGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGcc                          <  1:934930/140‑1 (MQ=255)

                                                                                                                                        ccGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCg              >  1:4771741/1‑150 (MQ=255)

                                                                                                                                         ccaCCAGCAGGCGCTGCTGGTCGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGt             >  2:142751/3‑150 (MQ=255)

                                                                                                                                         cGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGGACCGGGCTTCAGCGACCGGGTAATCTGCCACCTGGAGCGCGTCGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCGGCCACGCCCTCCGCTGGGCGt             >  2:1593520/1‑150 (MQ=255)

                                                                                                                                          gACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTcc                                                             <  2:366088/101‑1 (MQ=255)

                                                                                                                                          gACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTcc                                                             >  1:366088/1‑101 (MQ=255)

                                                                                                                                          caCCAGCAGGCGCTGCTGGTCGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                         >  1:1802032/2‑121 (MQ=255)

                                                                                                                                          caCCAGCAGGCGCTGCTGGTCGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTga                                         <  2:1802032/120‑1 (MQ=255)

                                                                                                                                           aCCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTAc           >  1:1762773/1‑150 (MQ=255)

                                                                                                                                           aCCAGCAGGCGCTGCTGGTCGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTAc           >  1:3363572/1‑150 (MQ=255)

                                                                                                                                            ccAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCAGCGGAGGGCGtggc          <  2:2896146/150‑4 (MQ=255)

                                                                                                                                            ccAGCAGCGCCGGCTGGTGGGCTGGCCGACCCACCTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCAGCGGAGGGCGtggc          <  2:4552726/150‑4 (MQ=255)

                                                                                                                                             ctgcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCTCCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCg         >  1:2939274/3‑150 (MQ=255)

                                                                                                                                                cagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGcc      <  2:1461469/150‑1 (MQ=255)

                                                                                                                                                  gcgcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTg    <  2:2939274/150‑1 (MQ=255)

                                                                                                                                                   cgcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTgg   <  1:1119073/150‑1 (MQ=255)

                                                                                                                                                    gcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTggg  >  1:4251790/1‑150 (MQ=255)

ATTGCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGGG  >  NC_002947/5613841‑5614138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`