| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,616,029 | A→T | 5.5% | intergenic (+38/+44) | PP_4933 → / ← hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,616,029 | 0 | A | T | 5.5% | 667.0 / 19.5 | 199 | intergenic (+38/+44) | PP_4933/hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (88/99); new base T (6/5); total (95/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.50e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
GAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGCACCCACC > NC_002947/5615880‑5616178 | gAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTaa > 1:4433932/1‑150 (MQ=255) agcagcAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAc < 2:577227/150‑1 (MQ=255) agcagcAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAc < 1:1224796/150‑1 (MQ=255) agcagcAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAc < 1:5019230/150‑1 (MQ=255) agcagcAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAAc < 2:3144499/150‑1 (MQ=255) agcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCg > 1:685834/1‑150 (MQ=255) agcagGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCg > 1:3239831/1‑150 (MQ=255) ggggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGGGCGGGTTTACCCGctcc < 1:4299054/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGGGCGGGTTTACCCGCTCca < 2:2625447/150‑1 (MQ=255) gggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCca < 1:2016015/150‑1 (MQ=255) ggTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcag < 1:556603/150‑1 (MQ=255) ttGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCcagca < 1:892232/150‑1 (MQ=255) ggtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCaga < 2:4009986/150‑1 (MQ=255) ggtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCaga < 2:3182919/150‑1 (MQ=255) gtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCagag > 2:636522/1‑150 (MQ=255) gtggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCagag < 1:793889/150‑1 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 2:437819/1‑150 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTGGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGACAGCTTTCACCTGCTTGCTGGGGCGGGTTTACCCGCTCcagcaagca < 2:5138090/150‑5 (MQ=255) tggAAAGCAAGCCCGCACGGGCGTCGCACTTACAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAgg > 1:997144/1‑150 (MQ=255) ggAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAggg > 2:4257990/1‑150 (MQ=255) aaaGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGgcc < 2:3078976/150‑1 (MQ=255) caagcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGccgccg > 2:2927654/1‑150 (MQ=255) agcCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGaa < 1:5285648/150‑1 (MQ=255) cccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGc < 1:16422/150‑1 (MQ=255) cccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGc < 1:16717/150‑1 (MQ=255) ccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCg > 2:2341563/1‑150 (MQ=255) ccGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCg > 1:4020770/1‑150 (MQ=255) cGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGa > 1:1858816/1‑150 (MQ=255) ccaaagCGTTGCAAGTGCGACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGAcc > 1:5207674/6‑150 (MQ=255) cACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGAcc < 2:1983962/150‑1 (MQ=255) aCGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGAccc < 2:149930/150‑1 (MQ=255) cGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGAcccc < 2:1858816/150‑1 (MQ=255) gCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGa < 1:4525094/143‑1 (MQ=255) gCGTCACACGTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAg < 2:3867523/150‑1 (MQ=255) cGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCa > 2:2437537/1‑150 (MQ=255) gCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAg > 2:899699/1‑150 (MQ=255) gCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAg > 1:3783697/1‑150 (MQ=255) cTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATc < 1:4857893/150‑1 (MQ=255) gtGCGACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCa < 2:5207674/149‑1 (MQ=255) cAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGtt > 1:5079652/1‑150 (MQ=255) aaCGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTc > 1:2945002/1‑150 (MQ=255) cTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGc < 1:2863870/150‑1 (MQ=255) tttGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCg > 2:5348510/1‑150 (MQ=255) tGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGaa < 1:2066555/150‑1 (MQ=255) gCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAtt < 1:4158380/150‑1 (MQ=255) cGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAttt > 2:2757594/1‑150 (MQ=255) gACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAAtttt > 1:1475742/1‑150 (MQ=255) gctgctGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACTATCGCCg < 1:5348510/150‑1 (MQ=255) gctgctGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCg < 1:2838167/150‑1 (MQ=255) gctgctGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCg > 1:3933882/1‑150 (MQ=255) tgGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTc > 1:2086090/1‑150 (MQ=255) gAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTACACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGa > 2:3375918/1‑150 (MQ=255) gAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGa < 1:1336396/150‑1 (MQ=255) aGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAg < 1:2604338/150‑1 (MQ=255) aGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGCTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAg < 2:1515392/150‑1 (MQ=255) ggCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGt > 1:2964310/1‑150 (MQ=255) gcgcGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGtt > 2:4609669/1‑150 (MQ=255) gcgGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTtct > 2:421999/1‑150 (MQ=255) tCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCGTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGAc < 2:5367014/150‑1 (MQ=255) cTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCa > 1:3326197/1‑150 (MQ=255) cGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGc < 2:1688958/150‑1 (MQ=255) gCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGcc < 1:1805019/150‑1 (MQ=255) gAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTCGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCa < 2:3898610/150‑1 (MQ=255) cAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCa < 1:4136087/150‑1 (MQ=255) aGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCAcc < 2:451715/150‑1 (MQ=255) gTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCt > 2:3753853/1‑150 (MQ=255) aCATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCa > 1:3416409/1‑150 (MQ=255) aCATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCa > 2:2481980/1‑150 (MQ=255) aTCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACg < 2:2309280/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCCTCACGGTgc < 2:2971948/150‑1 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCACAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc > 2:1135190/1‑150 (MQ=255) cGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCACAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgc > 2:1135150/1‑150 (MQ=255) gAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTgcc > 1:1606869/1‑150 (MQ=255) cTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCGGCACCGTGAAGGTgctggggc < 1:139913/150‑7 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATa > 2:4228825/1‑150 (MQ=255) tttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATa > 2:3434616/1‑150 (MQ=255) ttCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAg < 2:3239831/150‑1 (MQ=255) cACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGcc < 2:4967011/150‑1 (MQ=255) aCCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGccc > 1:101766/1‑150 (MQ=255) cTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCtt > 1:1008908/1‑150 (MQ=255) cTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCtt > 2:2477043/1‑150 (MQ=255) tgcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTg < 1:3003017/150‑1 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCACGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa < 1:4934274/150‑1 (MQ=255) gcttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa < 1:3684083/150‑1 (MQ=255) ctctgctGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGa > 1:1066793/4‑150 (MQ=255) tctgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGAGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGAc > 2:1398287/3‑150 (MQ=255) ttgctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACg > 1:4258453/1‑150 (MQ=255) gctGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGat > 1:3378356/1‑150 (MQ=255) tGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 2:4959750/1‑150 (MQ=255) tGGGGCGGGTTTACCCGCTCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 1:3142471/1‑150 (MQ=255) tGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 2:1277277/1‑150 (MQ=255) tGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGatat > 1:4782867/1‑150 (MQ=255) ggAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATc > 1:3442634/1‑150 (MQ=255) aGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAg < 2:1068502/150‑1 (MQ=255) gCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGc > 1:1266885/1‑150 (MQ=255) gTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGt > 1:5384407/1‑119 (MQ=255) gTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGt > 1:5384381/1‑119 (MQ=255) gTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGt < 2:5384403/119‑1 (MQ=255) gTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcaccc > 1:1540570/1‑150 (MQ=255) aaCCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGcacccacc < 1:2341563/150‑1 (MQ=255) | GAAGCAGCAGGGGTTGGTGGAAAGCAAGCCCGCACGGGCGTCGCACTTGCAACGCTTTGGCGACAAGGCGCGAGCGCTGCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCAGCCCCAGCACCTTCACGGTGCCGCCATAGCCCTTGACGATATCAGCACCCACC > NC_002947/5615880‑5616178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |