| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,645,249 | T→C | 7.7% | intergenic (+61/‑62) | dbpA → / → yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,645,249 | 0 | T | C | 7.7% | 510.2 / 21.4 | 169 | intergenic (+61/‑62) | dbpA/yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (80/76); new base C (6/7); total (86/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
CCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGC > NC_002947/5645100‑5645398 | ccGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCAt < 2:1133030/150‑1 (MQ=255) cGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATc < 1:2784820/150‑1 (MQ=255) ggAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCa < 1:3792407/150‑1 (MQ=255) gAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCAt > 2:1640094/1‑150 (MQ=255) gCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTc < 1:812493/150‑1 (MQ=255) gCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTc < 1:3912063/150‑1 (MQ=255) gggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTcgc < 2:2461683/150‑1 (MQ=255) gggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTcgc < 1:3536871/150‑1 (MQ=37) ggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTcgcg < 1:2118804/150‑1 (MQ=37) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCgg < 2:4330415/150‑1 (MQ=255) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCgg < 1:5349527/150‑1 (MQ=255) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCgg < 2:1460588/150‑1 (MQ=255) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCgg < 1:1640094/150‑1 (MQ=255) cgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCggg < 1:3390322/150‑1 (MQ=255) cgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCggg < 2:5147118/150‑1 (MQ=255) catGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGt > 1:1354001/3‑150 (MQ=255) ggCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGaa > 1:5421088/1‑150 (MQ=255) ggCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGaa < 1:242006/150‑1 (MQ=255) gCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAAc > 1:5418825/1‑150 (MQ=255) cAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAAccc > 2:662270/1‑150 (MQ=255) cAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAAccc > 1:1547954/1‑150 (MQ=255) cAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAAccc > 2:5178656/1‑150 (MQ=255) cAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAAccc < 1:229955/150‑1 (MQ=25) aaGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCg > 1:711922/1‑150 (MQ=255) aGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGc < 2:4434030/150‑1 (MQ=255) gCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCca > 1:429926/1‑150 (MQ=255) cATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCcaca < 2:5418825/150‑1 (MQ=255) aTGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAg < 2:1959599/150‑1 (MQ=255) aTGCAGCGGCTGAACAGCGGAAAGATCAAGGGTCGCGCCCTGAAAGTCCGAATTATATAAACCAAGCCAAACCCCCATTTAGGAGCGGGTTTACCCGCTAATGCGGCAGTCAATGCACCATCGAATTCGCGGGTCAACCCGCTCCCACAg < 1:2051872/150‑1 (MQ=25) gCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTc > 1:136069/1‑150 (MQ=255) tGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCAt > 1:1193134/1‑150 (MQ=255) tGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCAt > 1:869618/1‑150 (MQ=255) aGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCaa < 2:1638956/150‑1 (MQ=255) cGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAt > 2:4605499/1‑150 (MQ=255) ggCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATc < 2:4699585/150‑1 (MQ=255) cAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTg > 1:1376797/1‑150 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGa < 2:429926/150‑1 (MQ=255) ataTCATGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGAAAAGCCCCGTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCTTTCGCGGGTTAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGaa < 1:1092127/148‑1 (MQ=38) aGATCAAGGGTCGCGCCCTGACAGTCCGCATTATCTAACGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGaa < 2:2940629/150‑1 (MQ=255) tCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGt > 1:1346248/1‑150 (MQ=255) aggggTCGCGCCCTTAAAGTCCGAATTATCTAACGCCAGGCAAAGCCCCCTGTAGGTGGGGGTTTACCCGCGAATGCGGCTGTTAATGCACCATCGCATTCGGGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTc < 1:1844414/148‑1 (MQ=38) aaGGGTCGCGCCCTGAAAGTCCGCATTATCTAACGCCAGGCAAAGCCCCCTGTCGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACAATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTc < 1:1844554/150‑1 (MQ=255) aaGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTc > 1:677418/1‑150 (MQ=255) gggTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGATTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCAt < 2:2854126/150‑1 (MQ=255) ggTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATa > 2:5307083/1‑150 (MQ=255) cccTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCa > 2:314847/1‑150 (MQ=255) cccTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCa < 1:1021220/150‑1 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTc > 1:2663623/1‑150 (MQ=255) aaaGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCa > 2:3714707/1‑150 (MQ=255) aaGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCAc < 2:5101799/150‑1 (MQ=255) gCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGt > 1:2106296/1‑150 (MQ=255) cATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGaa < 2:2582511/122‑1 (MQ=255) cATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTg < 1:3867772/150‑1 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc > 2:4050567/1‑150 (MQ=255) gCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTgg > 1:4360792/1‑150 (MQ=255) ccAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggc > 1:1968097/1‑150 (MQ=255) aGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgc > 2:2812483/1‑150 (MQ=255) gCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccg > 1:502537/1‑150 (MQ=255) gCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccg > 2:199628/1‑150 (MQ=255) cAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccgg > 1:2710690/1‑150 (MQ=255) aaaGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggc > 1:4018143/1‑150 (MQ=255) tgaacccTGTGGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACCGGGTTCAGCATTTAAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGGTCATCCTTggcgccggcgc > 1:2502342/5‑150 (MQ=14) tgaacccTGTGGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCAGTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcgc > 1:4702885/5‑150 (MQ=17) ccccTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGACGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGcgccgc > 2:1462269/1‑150 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCgccgcc > 2:2820687/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGccgccg > 1:401025/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGccgccg < 1:3178130/150‑1 (MQ=255) tgggAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCCTTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTCCAAATCTGAAGGTTCATACCGTGCACTCCACCGCCGTGCTCATCCGTGGCGCCGGCGCCGCCGGCCt > 2:3904831/3‑150 (MQ=17) tAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCt < 2:488625/150‑1 (MQ=255) aGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCCTCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcggcgccggcgccaag < 2:3544426/150‑7 (MQ=255) aGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtg > 1:1052231/1‑150 (MQ=255) gCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtgt < 2:3999901/150‑1 (MQ=255) gCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtgt < 2:1786833/150‑1 (MQ=255) gccccGCGACTGCGGCAGTGACTGCACCATCGCATGCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGGGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCa < 2:5204189/148‑1 (MQ=255) aCCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAg > 1:938443/1‑150 (MQ=255) cggcgAATGCGGCAGTTAATGCACCATCGCTTTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt < 1:12536/148‑1 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:3809551/1‑150 (MQ=255) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:4061977/1‑150 (MQ=25) cgcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTc > 2:766209/1‑150 (MQ=255) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 2:2789665/1‑150 (MQ=255) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa < 2:248007/150‑1 (MQ=255) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 2:2203746/1‑150 (MQ=255) gAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGt < 1:4605499/150‑1 (MQ=255) cGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGcc < 1:1523570/125‑1 (MQ=255) cGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGcc > 2:1523570/1‑125 (MQ=255) cGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCg > 1:1901283/1‑150 (MQ=255) ggCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggc > 2:2397181/1‑114 (MQ=255) cAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGa < 2:3259316/65‑1 (MQ=255) cAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGa > 1:3259316/1‑65 (MQ=255) gTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGGTGTGCGCCCCGCGCAGTGCCCGTAGCg > 1:4230360/1‑150 (MQ=255) gTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCg < 1:3845479/150‑1 (MQ=255) tGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCgg < 1:4546962/150‑1 (MQ=255) tGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGgccgc > 1:1097834/1‑150 (MQ=255) cACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGccgccg < 2:5023558/150‑1 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg > 1:1010860/1‑150 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg < 1:5178711/150‑1 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg < 1:5178656/150‑1 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg > 1:4281897/1‑150 (MQ=255) aTCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtg < 1:3640017/150‑1 (MQ=255) tCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCTTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgc > 2:3173318/1‑150 (MQ=255) | CCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAATCTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGC > NC_002947/5645100‑5645398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |