| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,683,395 | C→G | 11.4% | intergenic (‑139/+69) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,683,395 | 0 | C | G | 11.4% | 195.0 / 2.3 | 71 | intergenic (‑139/+69) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| Reads supporting (aligned to +/- strand): ref base C (35/27); new base G (5/4); total (40/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAC > NC_002947/5683248‑5683538 | gTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctg < 2:5224000/150‑1 (MQ=255)gTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctg < 1:2596437/150‑1 (MQ=255) aaTACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgct < 2:5114721/150‑1 (MQ=255) aTGCAAACACAGACCTCCTGATGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 2:873940/150‑1 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 2:3952857/150‑1 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa > 1:873940/1‑150 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 1:423555/150‑1 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 1:3152612/150‑1 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGCGCGGCGTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgcgcagcag < 1:1766868/150‑8 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgcgcagcag < 1:4508794/150‑8 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAg < 1:1224341/150‑1 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAg < 2:3683479/150‑1 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGc < 1:696353/150‑1 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCACGCGTTCATTTCCACAGCAGGAACCGCCCGGGCGGCGGCGCAGc > 1:4490160/1‑150 (MQ=38) cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGcc < 1:4926038/150‑1 (MQ=255) aaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCGCAGCAGcccc < 2:2763586/150‑2 (MQ=255) cacaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGGCGTGTGTGGCGCAAGGGGCGCGCAGCGGCCCCCGGCGTTGATTGCCACAGCAAGGAACGCCCGGGGGGCGGCGCCGcccaaa > 1:2684973/1‑147 (MQ=255) cacaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGGAAGGGGCGCGAAGCGGCCCCCCGCGTTCATTGCCACAGCCTGAACCCCCCGGGCGGGTGCGCAGcccgaa > 1:4006958/1‑147 (MQ=37) acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc < 2:272448/150‑1 (MQ=255) acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc < 2:3002647/150‑1 (MQ=255) aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGa < 2:4106488/150‑1 (MQ=255) cctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGac < 2:2033465/150‑1 (MQ=255) ctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGaca < 2:4195767/150‑1 (MQ=255) tcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCACGCTTTCAATGCCACAGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATAGCGacac > 2:1684150/1‑150 (MQ=38) ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACaa < 1:5351930/150‑1 (MQ=255) gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAgg < 1:1427440/150‑1 (MQ=255) aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGCAAGGGGCGCGAAGCGGCCCCAGGCGTTCAATGCCACAGCATTAACCCCCCGGGGAGCTGCGCCGCCCAATAGCGACACAACGc > 1:3576014/1‑150 (MQ=25) tGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCATTGTGGCAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTACATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGc < 1:4840893/150‑1 (MQ=255) gTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTTTGTGGCGAAAGGGGCGCGCAGCGGCCCCCGGCTTTCATTTCCACGGCCTGAACCGCCCGGGGGGCGGCGCCGCCCGATCGCGCCCCAACGCCGCGcccccac > 2:4286523/1‑146 (MQ=255) ttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTGGCGAAAGGGGCGCGAAGCGGCCCCCGGCGTTCAATGCCACTGCATGAACCGCCGGGGCGGCTGCGCAGCCCAATCGCGCCACAACGCCGCGCCCAcaccacacca > 2:2043665/1‑150 (MQ=25) tgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAg < 2:139846/110‑1 (MQ=255) tgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAg > 1:139846/1‑110 (MQ=255) tGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACGGCATGAACCGCCGGGGCTGCGGCGCAGCCCTAACGCGACACAAGGCCGCACCCACACCAGACCACCAGGc > 2:4075499/1‑150 (MQ=37) tGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGa > 2:2988423/1‑115 (MQ=255) tGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGa < 1:2988423/115‑1 (MQ=255) gtttttttGTGGGTGCGGCCTTGTGCGGCTAAGGGGGGGCGACGCGGCCCCTGGATTTCTTTCCCACTGATTGAACCCCGGGGGGTGCTGCGCCGCCCTACGGCTAAACACGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcac < 2:1871786/145‑1 (MQ=255) gcggggCTTTGGGTCGCTACTGGGGCGCTACGGGGCCCATGTTTTTTTTTGCCAGTGCATGAACGGCGGGGGCTGCTGCGCCGCCCTAGCGCTACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 2:1661714/146‑1 (MQ=255) gcggggCGTTGGGTCGCTACTGGGGCGCCACGCGCCCCCTGGATATATTCCCCACTCTATGACCGGGGGGGGGTGGTGCCCAGCCCTCGCGCGACAAACGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 2:2880678/146‑1 (MQ=255) aGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg > 2:2412512/1‑150 (MQ=255) aGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg > 2:2412457/1‑150 (MQ=255) ttGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGtt > 1:367645/1‑150 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg > 2:3117420/1‑146 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg > 2:3117578/1‑146 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg > 2:388506/1‑146 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg < 1:3117420/146‑1 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg < 1:3117578/146‑1 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg < 1:388506/146‑1 (MQ=255) gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATCGCGACACAAGGCCGCGCCCACTCCAGACCACCAGGCCCGGCGCCGCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGGCACg > 1:2028132/1‑150 (MQ=39) gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 2:3999059/1‑150 (MQ=255) tgcgcAGCAGCCCC‑GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACGCCAGACCACCAGGCCCTGCGCCTCACATCCGAACCCAGGTCAGGTTGCAGATCCGCGTCACGcc > 1:1776388/2‑149 (MQ=38) gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCTCCCCCGCCACACCCCCAGGCCCAGCGCCGCACAACCTAACCAAGGGCAGGTTGCCGATCCGCGTCACGCa > 1:1482965/1‑150 (MQ=255) gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCGGCGCAGCCCGATCGCGACCCAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCGCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGcc > 2:1510550/1‑149 (MQ=255) cgggggCCCCTGGTTTTCTTTGCCACTGCCTGACCGGCGGGGGGGGCGGGGCCCCCCTAGCGCCACACATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCa < 2:60751/146‑1 (MQ=255) ggCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCGATCGCGACACAAGGCCGCGCCCACACCAGACCACCAGGCCCAGCGCCGCCCATCCGAAACAACGTCAGGTTGGAGATCCGCGTCACCCACCAGccg > 1:1155425/1‑149 (MQ=255) gCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCCCCCGCCtt > 1:5335864/1‑150 (MQ=255) gCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGAGCCGCGTCACGCACCAGCCtg > 2:5411603/1‑149 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCa > 2:1176421/1‑150 (MQ=255) ttCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCGATCGCGACACAAGGCCGCGCCCCCACCACACCCCCCCGCCCAGCGCCGCACATCCTAACCAACCTCACGTTGCAGATCCCCGTCACGCACCAGCCATTCCAAAGCgc > 1:5044401/1‑149 (MQ=255) ttCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCGTTCCAATGCgc > 2:1543783/1‑149 (MQ=255) tCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc > 2:4039171/1‑150 (MQ=255) cATTGCCACTGCATGACCCGCGGGGGCTGCTGCGCACCCCTACCGCGACACCCGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAcc < 1:4929470/150‑1 (MQ=255) aTTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATAGCGACACAAGGCCGCTCCCACACCAGACCACCAGGCCCAGCGCCGCACAACCTAACCAACGTCAGGTTTCAGATCCGCGGCACCCACCAGCCATTACCAAGCGACCa > 1:2760039/1‑150 (MQ=255) ttcccACTGAATCACCCGCGGGGGGTGCGGCCCACCCCAACCGCCAAACACGCCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAg < 1:4427188/147‑1 (MQ=255) ttGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAg > 2:2191641/1‑150 (MQ=255) gCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGt < 1:3999059/150‑1 (MQ=255) ccACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc > 2:5092680/1‑150 (MQ=255) cACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTcc > 2:428164/1‑150 (MQ=255) aCTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCAGCGCCTCACAACCTAAACAAGGGCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCg > 1:3546111/1‑150 (MQ=255) cATGAAGCGCCGGGGGTGCTGCGCAGCCCTATCGCGTCACAAGGGCGGTGCCACTGCAGACCACCAGGCCCTGCGCCTCACATGCTTAGCAAGGTGAGGTTGGATATGCGCGTGTAGCACCAGGCTTTGCAATGCGTCCAGGTGCGGttc > 2:5153917/1‑148 (MQ=255) aaCCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCa > 2:4406024/1‑118 (MQ=255) aaCCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCa < 1:4406024/118‑1 (MQ=255) cggccgGGGCTGCTGCGCAGCCCTATCGCGACACACGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc < 2:4434013/148‑1 (MQ=255) ccgccgGGGGTTGTGGGCAGCCCAATAGCGACACAATGGCGCTCCCACTCCAGACCACCATTGCCTGCGGCTCACATCCTAAACAATGTCAGGTTGGATATACGCGTCACGCACCAGACTTTCCAATTCGACCAGGTACGGTAACCgcgc > 2:3169124/1‑150 (MQ=255) cgatagggCTGCGCAGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGcc > 1:2944367/6‑150 (MQ=255) gccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGccc > 2:2742050/1‑149 (MQ=255) ccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAc > 1:3633473/1‑150 (MQ=255) | GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAC > NC_002947/5683248‑5683538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |