BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,708,565	T→A	5.5%	L202Q (CTG→CAG)	PP_5009 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,708,565	0	T	A	5.5%	557.8 / 13.8	164	L202Q (CTG→CAG)	PP_5009	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (84/71); new base A (5/4); total (89/75)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 164 total aligned reads displayed.

GGGCTCGACGAAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGA  >  NC_002947/5708417‑5708712

 ggCTCGACGAAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTgg                                                                                                                                                   <  2:3790764/150‑1 (MQ=255)

 ggCTCGACGAAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTgg                                                                                                                                                   <  1:4165681/150‑1 (MQ=255)

  gCTCGACGAAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGc                                                                                                                                                  >  1:267674/1‑150 (MQ=255)

      gacgaAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTc                                                                                                                                              >  1:1440732/1‑150 (MQ=255)

        cgaAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGa                                                                                                                                            <  2:5281309/150‑1 (MQ=255)

        cgaAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCAGGCTGTCgt                                                                                                                                            <  2:1382758/150‑2 (MQ=255)

         gaAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAg                                                                                                                                           >  2:2921339/1‑150 (MQ=255)

         gaAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCAGGCTGTCgtg                                                                                                                                           >  2:2365779/1‑148 (MQ=255)

          aaGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAgg                                                                                                                                          >  2:2919887/1‑150 (MQ=255)

          aaGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCAGGCTGTCgtgt                                                                                                                                          <  1:2365779/150‑4 (MQ=255)

                        tcGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGACTGTCGAGGCGATACAAGTCACg                                                                                                                            >  1:4686062/1‑150 (MQ=255)

                         cgcgCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGc                                                                                                                           <  2:5214326/150‑1 (MQ=255)

                           cgcATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTc                                                                                                                         <  1:792172/150‑1 (MQ=255)

                            gcATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCg                                                                                                                        <  1:5292958/150‑1 (MQ=255)

                            gcATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCg                                                                                                                        >  2:2582431/1‑150 (MQ=255)

                            gcATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCg                                                                                                                        >  2:2582456/1‑150 (MQ=255)

                              aTGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGa                                                                                                                                       >  1:2144743/1‑133 (MQ=255)

                                gCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAAc                                                                                                                    >  1:1574367/1‑150 (MQ=255)

                                  tctGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACgg                                                                                                                  >  2:3090359/1‑150 (MQ=255)

                                   ctggctggAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGa                                                                                                                 <  2:1093066/150‑1 (MQ=255)

                                     ggctggAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCAAGCTCGGAACGGATg                                                                                                               <  2:4254033/150‑1 (MQ=255)

                                      gctggAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATgg                                                                                                              >  1:3028681/1‑150 (MQ=255)

                                          gAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCggg                                                                                                          <  2:3505463/150‑1 (MQ=255)

                                          gAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCggg                                                                                                          <  1:4112885/150‑1 (MQ=255)

                                          gAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCggg                                                                                                          >  2:3235836/1‑150 (MQ=255)

                                             cacaCCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGca                                                                                                       >  1:3744081/1‑150 (MQ=255)

                                               cacCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGcaca                                                                                                     >  1:4495298/1‑150 (MQ=255)

                                                   aTCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACAcc                                                                                                 >  2:2840971/1‑150 (MQ=255)

                                                   aTCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACAcc                                                                                                 >  2:5275248/1‑150 (MQ=255)

                                                           tGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCt                                                                                         >  2:204016/1‑150 (MQ=255)

                                                           tGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCt                                                                                         >  2:204045/1‑150 (MQ=255)

                                                              aTTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTAcc                                                                                      >  1:4281508/1‑150 (MQ=255)

                                                              aTTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTAcc                                                                                      >  1:5254157/1‑150 (MQ=255)

                                                                tGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCgg                                                                                    >  2:2059532/1‑150 (MQ=255)

                                                                 gCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGa                                                                                   <  2:4294853/150‑1 (MQ=255)

                                                                 gCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGa                                                                                   >  1:723845/1‑150 (MQ=255)

                                                                 gCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGa                                                                                   <  2:3744081/150‑1 (MQ=255)

                                                                  cTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGAt                                                                                  <  2:4190999/150‑1 (MQ=255)

                                                                  cTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGAt                                                                                  >  1:839676/1‑150 (MQ=255)

                                                                   tCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCt                                                                                                                          >  2:1181341/1‑109 (MQ=255)

                                                                   tCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCt                                                                                                                          <  1:1181341/109‑1 (MQ=255)

                                                                   tCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATc                                                                                 >  2:491149/1‑150 (MQ=255)

                                                                   tCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATc                                                                                 <  2:1760678/150‑1 (MQ=255)

                                                                     gagaACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATa                                                                                                                                     <  2:2014870/96‑1 (MQ=255)

                                                                     gagaACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATa                                                                                                                                     >  1:2014870/1‑96 (MQ=255)

                                                                     gagaACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTa                                                                               <  1:2840971/150‑1 (MQ=255)

                                                                     gagaACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTa                                                                               <  1:505109/150‑1 (MQ=255)

                                                                      agaACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTAt                                                                              <  2:413603/150‑1 (MQ=255)

                                                                        aaCCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTg                                                                            <  2:1847360/150‑1 (MQ=255)

                                                                         aCCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGc                                                                           <  2:2096069/150‑1 (MQ=255)

                                                                          cctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCt                                                                          >  2:5002563/1‑150 (MQ=255)

                                                                           ctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACaa                                                                                                                                  <  1:1554525/93‑1 (MQ=255)

                                                                           ctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGt                                                                                                                                <  1:2927919/95‑1 (MQ=255)

                                                                           ctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGt                                                                                                                                <  1:2927059/95‑1 (MQ=255)

                                                                           ctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGt                                                                                                                                >  2:2927059/1‑95 (MQ=255)

                                                                           ctccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCtc                                                                         >  1:3538450/1‑150 (MQ=255)

                                                                            tccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCtca                                                                        <  2:155227/150‑1 (MQ=255)

                                                                             ccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCtcat                                                                       >  2:1308122/1‑150 (MQ=255)

                                                                             ccctcGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCtcat                                                                       >  1:673505/1‑150 (MQ=255)

                                                                                  gCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCt                                                                          >  1:5402382/1‑142 (MQ=255)

                                                                                  gCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCt                                                                          <  2:5402382/142‑1 (MQ=255)

                                                                                   ccAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATcaccac                                                                 >  2:2325837/1‑150 (MQ=255)

                                                                                        gCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTg                                                            <  1:4893370/150‑1 (MQ=255)

                                                                                             gCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGa                                                                                   <  1:1870193/122‑1 (MQ=255)

                                                                                             gCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGa                                                                                   >  2:1870193/1‑122 (MQ=255)

                                                                                             gCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGAGgcaac                                                       >  1:799832/1‑150 (MQ=255)

                                                                                                gatgatGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGgcaaccgc                                                    >  1:1061490/1‑150 (MQ=255)

                                                                                                   gatgCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGgcaaccgcaac                                                 <  1:2262728/150‑1 (MQ=255)

                                                                                                      gCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTg                                              >  2:374923/1‑150 (MQ=255)

                                                                                                        aaaaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGt                                                             >  2:5259540/1‑133 (MQ=255)

                                                                                                        aaaaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGt                                                             <  1:5259540/133‑1 (MQ=255)

                                                                                                        aaaaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGt                                            >  1:3216636/1‑150 (MQ=255)

                                                                                                          aaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTc                                          <  1:5129052/150‑1 (MQ=255)

                                                                                                                 aaTGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtgcaatg                                   <  1:262761/150‑1 (MQ=255)

                                                                                                                    gTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTgg                                             <  2:2285887/137‑1 (MQ=255)

                                                                                                                    gTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTgg                                             >  1:2285887/1‑137 (MQ=255)

                                                                                                                      aCGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGc                              <  2:167721/150‑1 (MQ=255)

                                                                                                                         cccTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCt                           >  1:4801498/1‑150 (MQ=255)

                                                                                                                          ccTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATATAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTg                          >  2:2169577/1‑150 (MQ=255)

                                                                                                                           cTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGTGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGc                         <  2:1713150/150‑1 (MQ=255)

                                                                                                                            tGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcg                        >  2:1004326/1‑150 (MQ=255)

                                                                                                                                 gACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTa                                                                                             >  2:1265251/1‑76 (MQ=255)

                                                                                                                                 gACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTa                                                                                             <  1:1265251/76‑1 (MQ=255)

                                                                                                                                     gggTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCggttcggttc               <  1:3939542/150‑1 (MQ=255)

                                                                                                                                       gTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCATGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgt             <  1:4052359/150‑1 (MQ=255)

                                                                                                                                       gTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgt             <  2:3538450/150‑1 (MQ=255)

                                                                                                                                        tACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgtc            <  1:2371441/150‑1 (MQ=255)

                                                                                                                                          ctcGACAGCCAGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGc          >  1:2506056/3‑150 (MQ=255)

                                                                                                                                           tcGACAGCCAGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgtc            <  2:1690129/146‑1 (MQ=255)

                                                                                                                                           tcGACAGCCAGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgtc            >  1:1690129/2‑147 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGACCGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttcgg                  <  1:4110777/139‑1 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttcgg                  >  2:4110777/1‑139 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCAt       >  2:3987798/1‑150 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCAt       >  2:55079/1‑150 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCAt       >  2:4663929/1‑150 (MQ=255)

                                                                                                                                             gACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCAt       >  2:3987803/1‑150 (MQ=255)

                                                                                                                                                aGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtgcaatgcaa                                >  2:4796079/1‑122 (MQ=255)

                                                                                                                                                aGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtgcaatgcaa                                <  1:4796079/122‑1 (MQ=255)

                                                                                                                                                 gCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCg   >  1:1263381/1‑150 (MQ=255)

                                                                                                                                                  ccTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGa  >  2:366890/1‑150 (MQ=255)

GGGCTCGACGAAGACAGCCAAGTCTCGCGCATGCTCTGGCTGGAGCACACCATCAAGGCTGCATTGCTCGAGAACCTCCCTCGCCAAGGCCTGGCAGATGATGCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGA  >  NC_002947/5708417‑5708712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`