| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,750,100 | T→G | 5.7% | intergenic (‑149/+37) | PP_5043 ← / ← typA | PhoPQ‑activated pathogenicity‑like protein/ribosome associated GTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,750,100 | 0 | T | G | 5.7% | 620.3 / 14.1 | 215 | intergenic (‑149/+37) | PP_5043/typA | PhoPQ‑activated pathogenicity‑like protein/ribosome associated GTPase |
| Reads supporting (aligned to +/- strand): ref base T (109/91); new base G (10/5); total (119/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 218 total aligned reads displayed.
TGTTCCAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGATGA > NC_002947/5749951‑5750246 | tGTTCCAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGGGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCt > 1:4602626/1‑150 (MQ=255) gTTCCAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCtt < 2:3197527/150‑1 (MQ=255) ttCCAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCttt > 1:193273/1‑150 (MQ=255) cAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCACAACACAGTCGCTTCCTACTGGAGCTTTCCCCAAGGCACACAAAAACGCCCCCCGCCGTTCgc > 1:4118202/1‑149 (MQ=255) aaGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGAc > 1:1179302/1‑150 (MQ=255) aaGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCAGCCTTTCGAc > 2:3735080/1‑150 (MQ=255) tCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCACAACACAGTCGCGTCCTACTGGAGCTGTCCCCAAGGCACACAAAAACGCCCCCGGCCGTTCGACCggg > 2:3781775/1‑150 (MQ=255) tCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCggg < 2:4293701/150‑1 (MQ=255) tCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTATGATTGTCACAAGGCTCCTCGGTTTGCCGTCTAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGTAGCTTTCAACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCggg < 2:2036195/150‑1 (MQ=255) aaaGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGc > 1:2748493/1‑150 (MQ=255) aGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGAAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGt < 1:556770/150‑1 (MQ=255) gCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGtt > 1:5021902/1‑150 (MQ=255) gCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGtt > 1:4781009/1‑150 (MQ=255) cAAGCGCCAGCCACCCTACGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGGCGAACAAGCACCTGCAAAACACAGTCGCTTCCTCCTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGttt < 2:4118202/150‑1 (MQ=255) aaGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGtttt < 2:282495/150‑1 (MQ=255) aaGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGttt < 1:2260232/149‑1 (MQ=255) agagCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTttc > 2:5008085/1‑150 (MQ=255) agccagccAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTttcat > 1:1754240/1‑150 (MQ=255) cagccaACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACCCAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTttcattca < 2:4216913/150‑1 (MQ=255) gccaACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGc > 1:3548224/1‑150 (MQ=255) gccaACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGc > 1:573437/1‑150 (MQ=255) ccaACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGcc > 1:4276446/1‑150 (MQ=255) aaCCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTg > 2:562296/1‑150 (MQ=255) aCCTACGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCAAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGa < 2:1240315/150‑1 (MQ=255) aCCTAAGCACGGCTTCTGATTGTCACACGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGa < 1:2406104/150‑1 (MQ=255) cTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGc > 2:2552012/1‑150 (MQ=255) cTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTGTCGACCGGGGGCGTTTTCATTCAGCCTGAGc < 2:226596/150‑1 (MQ=255) tAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCt > 1:4970739/1‑150 (MQ=255) aCGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTc > 2:1698419/1‑150 (MQ=255) cGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCa < 1:1417505/150‑1 (MQ=255) cGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCa < 1:4348475/150‑1 (MQ=255) ggCTTCTGATTGTCACAAGGCTCCTCGGTTTGACGTCGAACAAGCACCTGCAAAACACAGTCGCTTACTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCAAACTccg > 2:4721676/1‑148 (MQ=255) tGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttg < 2:4912870/150‑1 (MQ=255) tGATTGTCACAAGGCTCCTCGGTTTCCCTTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTTGTGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttg < 1:1036757/150‑1 (MQ=255) gATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttgg > 1:3295720/1‑150 (MQ=255) ttGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCGTTCGACCGGGGGCGTTTTCATTCAGCCAGAGCTAACTCAGttgttgggt > 1:12376/1‑148 (MQ=255) acaAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttggctttctt > 2:1162080/1‑150 (MQ=255) acaAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttggctttctt > 2:3400032/1‑150 (MQ=255) acaAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttcttggctttctt < 1:312015/150‑1 (MQ=255) tcctcGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTgcg > 1:1588487/1‑150 (MQ=255) tcctcGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAAAGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTgcg > 1:806186/1‑150 (MQ=255) ctcGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGcgcg > 2:3253299/1‑150 (MQ=255) tcGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCt < 1:3280981/114‑1 (MQ=255) tcGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCgg > 1:4010120/1‑150 (MQ=255) tCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGcc < 1:4620275/150‑1 (MQ=255) aaCAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTc < 2:4970739/150‑1 (MQ=255) aCAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCACTTATTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCg > 1:4220782/1‑150 (MQ=255) cAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGt > 2:2615904/1‑150 (MQ=255) cAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGAGCGTACCCgcgcagccaa < 1:2195239/150‑7 (MQ=255) gCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTccc > 2:2901133/1‑149 (MQ=255) gCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCa < 1:3026561/150‑1 (MQ=255) cACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAg < 1:3743504/150‑1 (MQ=255) aCCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAgg < 1:754777/150‑1 (MQ=255) aCCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAgg < 1:3252680/150‑1 (MQ=255) cTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTcc > 2:5162291/1‑145 (MQ=255) cTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTcc < 1:5162291/145‑1 (MQ=255) tGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTc < 2:1310648/65‑1 (MQ=255) tGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTc > 1:1310648/1‑65 (MQ=255) tGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCCTTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGAtc > 2:4883926/1‑150 (MQ=255) aaaaCACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAAc > 2:3594270/1‑95 (MQ=255) aaaCACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCGTCGTCCAGGAgcttct > 1:1653503/1‑150 (MQ=255) aaCACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATcttctt > 2:390330/1‑150 (MQ=255) aaCACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCGTTCGACCGGGGGCGTTTTCATTAAGCCTGAGCTAACGCAGTTATTTGCTTTATTGGCTGCGCGGGTAAGCTCGCCGTCGTCCAGGATcttctt > 1:1084724/1‑150 (MQ=255) acacAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTg < 2:477921/150‑1 (MQ=255) cGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGAc < 2:955804/150‑1 (MQ=255) cGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCCGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGAc < 2:1866534/150‑1 (MQ=255) gCTTCCTACTGGAGCTTTCCACAAGGCACACAAAATCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACg > 2:5358527/1‑150 (MQ=255) ttCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCgg > 2:4617657/1‑110 (MQ=255) ttCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGa < 2:3295720/150‑1 (MQ=255) tCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGAt < 2:2149776/150‑1 (MQ=255) tCCTACTGGAGCTCTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGAt < 2:1196470/150‑1 (MQ=255) ccTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATc < 2:2915958/150‑1 (MQ=255) ccTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATc > 2:3117416/1‑150 (MQ=255) ccTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATc > 2:2255512/1‑150 (MQ=255) tACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCgc > 2:4550680/1‑149 (MQ=255) tACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGa > 2:3267091/1‑150 (MQ=255) aCTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCGTCGTCCAGGATCTTCTTGCGCAGACGGATCGAc > 1:3711475/1‑150 (MQ=255) ggAGCTTTCCAAAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTa < 1:1558940/150‑1 (MQ=255) gAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTc < 1:2871277/118‑1 (MQ=255) gCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGAcctggac < 2:1097820/150‑7 (MQ=255) cacaAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGttctt > 2:405692/1‑74 (MQ=255) caAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTc > 2:4529118/1‑150 (MQ=255) acacaAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACGTAGGAGTCACGTCGCACAg > 1:2371576/1‑150 (MQ=255) acaAAATCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCt > 2:3067232/1‑150 (MQ=255) acaAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCt > 1:4032781/1‑150 (MQ=255) gaaaaCGCCCCCGGTCGAAAGGCCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCg > 1:4562212/2‑96 (MQ=25) aaaaaCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCgg < 2:822234/81‑1 (MQ=255) aaaCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCtcgtc < 2:2093044/150‑1 (MQ=255) aCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTcgtcgt > 2:3697815/1‑150 (MQ=255) aCGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTcgtcgt > 2:2437399/1‑150 (MQ=255) gCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTcc < 1:279511/150‑1 (MQ=255) gCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACGTAGGAGTCACTTCGCACAGCTCGTCGTcc > 2:4557915/1‑150 (MQ=255) gCCCCCGGCCTTTCGACCGGGGGCGTGTTCATTCAGCCTGAGCTAACTCCGTTCTTGGCTTTCTTGGCTGCGCGGGTCCGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTcc > 2:3509783/1‑150 (MQ=255) ccccGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTg > 2:4860939/1‑150 (MQ=255) ccccGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTg < 2:3294788/150‑1 (MQ=255) ccGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGa > 1:2054521/1‑150 (MQ=255) ccGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGa > 2:3956024/1‑150 (MQ=255) cGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGAt < 1:3781775/150‑1 (MQ=255) gCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGATGa > 2:1544698/1‑150 (MQ=255) cTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAg < 1:901136/115‑1 (MQ=255) | TGTTCCAAGCTCCAAAGCAAGAGCCAGCCAACCTAAGCACGGCTTCTGATTGTCACAAGGCTCCTCGGTTTGCCGTCGAACAAGCACCTGCAAAACACAGTCGCTTCCTACTGGAGCTTTCCACAAGGCACACAAAAACGCCCCCGGCCTTTCGACCGGGGGCGTTTTCATTCAGCCTGAGCTAACTCAGTTCTTGGCTTTCTTGGCTGCGCGGGTACGCTCGCCTTCGTCCAGGATCTTCTTGCGCAGACGGATCGACTTAGGAGTCACTTCGCACAGCTCGTCGTCCTGGATGA > NC_002947/5749951‑5750246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |