| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,851,477 | T→C | 8.7% | G68G (GGT→GGC) | ilvD → | dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,851,477 | 0 | T | C | 8.7% | 721.0 / 39.7 | 242 | G68G (GGT→GGC) | ilvD | dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (96/125); new base C (18/3); total (114/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
GTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGT > NC_002947/5851329‑5851623 | gTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGgtg > 2:3939924/1‑150 (MQ=255)gTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCAGCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGgtg < 1:4611712/150‑1 (MQ=255) ccTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGgtggcgt < 2:479891/150‑1 (MQ=255) ccTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGgtggcgt > 2:4522177/1‑150 (MQ=255) cTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGGGGCTCGCGAAATCGAACGC‑GCCGgtggcgtg < 2:3647445/150‑1 (MQ=255) ggCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCCTGTGCACCTGAAGGACCTGGGCCCGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCa > 2:3310718/1‑150 (MQ=255) gcgcgaCACCGGGATGAAGGACGAAGAATTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCaa < 1:4003592/150‑1 (MQ=255) cgcCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGa < 2:5052827/150‑1 (MQ=255) gcCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGaa > 2:1859869/1‑150 (MQ=255) ccACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAAt < 1:5277146/150‑1 (MQ=255) aCCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTc < 1:882314/150‑1 (MQ=255) gggATGAAGGAAGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAac < 1:4383833/150‑1 (MQ=255) gAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCAt > 2:3108021/1‑150 (MQ=255) aGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATcg > 2:3807758/1‑150 (MQ=255) cGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGaa < 1:1418590/133‑1 (MQ=255) cGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGaa > 2:1418548/1‑133 (MQ=255) cGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGt < 2:1975859/150‑1 (MQ=255) cGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTCCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGt < 1:4830544/150‑1 (MQ=255) gAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTc > 1:4366195/1‑150 (MQ=255) gAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTc < 1:2563202/150‑1 (MQ=255) gAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTc > 2:501804/1‑150 (MQ=255) ttCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGAc > 2:1269567/1‑150 (MQ=255) aaGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGc > 2:431698/1‑150 (MQ=255) aaaCCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATc > 2:297996/1‑150 (MQ=255) aaaCCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATc < 1:4002167/150‑1 (MQ=255) ccGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGcc > 2:2371807/1‑150 (MQ=255) tcatcGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATgg < 1:895970/150‑1 (MQ=255) atcgccatcgccAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGc < 2:4648330/150‑1 (MQ=255) atcgccatcgccAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGc < 1:3076841/150‑1 (MQ=255) tcgccatcgccaACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGcc > 1:1633461/1‑150 (MQ=255) tcgccatcgccaACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGcc < 2:389708/150‑1 (MQ=255) cgccatcaccaACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCa > 2:4156069/1‑150 (MQ=255) tggtgaaCTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCatgacg > 1:1166327/6‑150 (MQ=255) tcgccaACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCacgacg < 2:3166548/150‑1 (MQ=255) gaaCTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCAt > 2:1588682/2‑150 (MQ=255) cTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCt > 1:5001597/1‑150 (MQ=255) cTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCt < 1:2846652/150‑1 (MQ=255) cTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCt < 2:2909851/150‑1 (MQ=255) gTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGTGTGGCCAAGGAATTc > 2:2659105/1‑97 (MQ=255) ccAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCt > 2:3599147/1‑150 (MQ=255) ccAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCt > 1:3466051/1‑150 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt < 1:5263871/150‑1 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt > 1:3911234/1‑150 (MQ=255) aGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGc > 2:645670/1‑150 (MQ=255) ttCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCa > 1:2820247/1‑150 (MQ=255) tACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGcc < 1:456485/150‑1 (MQ=255) cGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCcgcg > 1:4166005/1‑150 (MQ=255) ggCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGaa > 2:2108601/1‑150 (MQ=255) gCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGaaa < 2:4999441/150‑1 (MQ=255) ccATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAAt > 2:2832672/1‑150 (MQ=255) tgtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAt > 2:2166269/1‑150 (MQ=255) tgtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAt > 1:2714424/1‑150 (MQ=255) gtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAtt < 1:582697/150‑1 (MQ=255) gtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAtt > 1:458948/1‑150 (MQ=255) tgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTg < 2:3505098/150‑1 (MQ=255) cACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGcc > 2:2822861/1‑150 (MQ=255) aCCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCg > 1:2464588/1‑150 (MQ=255) cTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCCTGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGAc > 2:1423691/1‑150 (MQ=255) aaGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGcc > 2:1547191/1‑150 (MQ=255) ggACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGt > 1:3251488/1‑150 (MQ=255) gACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTg < 1:4092056/150‑1 (MQ=255) gACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGActcggtt > 1:1921664/1‑144 (MQ=255) cTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGaa > 1:1961143/1‑150 (MQ=255) tGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAAt > 1:3540324/1‑150 (MQ=255) tGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAAt > 1:5214760/1‑150 (MQ=255) tGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAAt > 2:755326/1‑150 (MQ=255) gggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATa > 1:4451196/1‑150 (MQ=255) gggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATa > 1:3684996/1‑150 (MQ=255) cggCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATa > 1:70179/2‑150 (MQ=255) ggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGTCGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATAc < 1:3358019/150‑1 (MQ=255) ggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATAc < 1:4509911/150‑1 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 1:3492423/150‑1 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa > 1:4928783/1‑150 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 1:1005161/150‑1 (MQ=255) gCCAGCGGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa > 2:2290805/1‑150 (MQ=255) gCCAGCGGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 2:4597029/150‑1 (MQ=255) ccAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACAt < 2:1851697/150‑1 (MQ=255) ccAGCCCGTCGCGCGCGAAATTG‑ACGCAGCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAatatat > 2:3755425/1‑150 (MQ=255) gtggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCCACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAAt > 1:1818449/1‑150 (MQ=255) gtggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAAt > 2:3488891/1‑150 (MQ=255) ggggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAAt < 2:4396888/148‑1 (MQ=255) ggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATgc < 1:3310718/150‑1 (MQ=255) gCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATgcg < 2:1374163/150‑1 (MQ=255) cTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATgcgc < 2:4928783/150‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCacga < 2:2494954/81‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCacga > 1:2494954/1‑81 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGt > 1:1302451/1‑129 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGt < 2:1302451/129‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa > 1:3842304/1‑137 (MQ=255) gAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGaa < 2:4142079/108‑1 (MQ=255) gAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTgc < 1:3825233/150‑1 (MQ=255) gAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTgc < 1:5068917/150‑1 (MQ=255) tCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGACTACATGGTCAATGCGCACTGCGCCg > 2:4727274/1‑150 (MQ=255) gAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGAc < 2:2712821/150‑1 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCa > 1:1360478/1‑72 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCa < 2:4487851/150‑1 (MQ=255) gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAtt > 1:1856093/1‑102 (MQ=255) ccGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCg > 2:3428248/1‑150 (MQ=255) cGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGt < 2:5414235/150‑1 (MQ=255) cGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGAAGCCATCGt < 1:2290805/150‑1 (MQ=255) | GTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGT > NC_002947/5851329‑5851623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |