| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,851,534 | C→T | 12.2% | H87H (CAC→CAT) | ilvD → | dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,851,534 | 0 | C | T | 12.2% | 659.2 / 64.3 | 246 | H87H (CAC→CAT) | ilvD | dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (101/115); new base T (25/5); total (126/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
TCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGCCCTGCGCCTG > NC_002947/5851389‑5851681 | gaaCTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCAt > 2:1588682/2‑150 (MQ=255) cTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCt > 1:5001597/1‑150 (MQ=255) tCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCtc > 2:2905712/1‑149 (MQ=255) gTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTa > 1:247799/1‑150 (MQ=255) tCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTatt > 2:3652076/1‑148 (MQ=255) cACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTc < 2:2339596/150‑1 (MQ=255) cccAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGc > 1:4052093/1‑150 (MQ=255) ccAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCt > 1:3466051/1‑150 (MQ=255) ccAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCt > 2:3599147/1‑150 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt > 1:3911234/1‑150 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt < 1:5263871/150‑1 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt > 2:3535861/1‑150 (MQ=255) ccAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt < 2:1523856/150‑1 (MQ=255) caaGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGGGGCCACGGACTTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCt > 1:2627968/3‑150 (MQ=255) aGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGc > 2:645670/1‑150 (MQ=255) cGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCcgcg > 1:4166005/1‑150 (MQ=255) ggCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGaa < 2:1895478/150‑1 (MQ=255) gCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGaaa < 2:4999457/150‑1 (MQ=255) ccATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAAt > 2:2832672/1‑150 (MQ=255) tgtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAt > 2:2166269/1‑150 (MQ=255) tgtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAt < 1:4448345/150‑1 (MQ=255) tgtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAt < 1:1269567/150‑1 (MQ=255) gtgCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCAtt > 1:458948/1‑150 (MQ=255) gCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGc < 1:4231439/150‑1 (MQ=255) aCCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCg > 1:4540023/1‑150 (MQ=255) ccTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGa < 2:3306019/150‑1 (MQ=255) tGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACg > 1:3769772/1‑150 (MQ=255) gAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGActc > 1:3536614/1‑148 (MQ=255) aaGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGActcg > 2:1276178/1‑147 (MQ=255) gACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTg < 1:4876295/150‑1 (MQ=255) gACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGACATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTg < 1:3302289/150‑1 (MQ=255) gACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGActcggtt > 1:1921664/1‑144 (MQ=255) aCCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGATGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTgg > 2:4148064/1‑150 (MQ=255) cTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGaa > 2:3935264/1‑150 (MQ=255) tGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAAt > 2:755326/1‑150 (MQ=255) cggCCAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATa > 1:70179/2‑150 (MQ=255) ggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGTCGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATAc < 1:3358019/150‑1 (MQ=255) ggCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATAc < 1:4509911/150‑1 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 1:1005161/150‑1 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 2:5214760/150‑1 (MQ=255) gCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa > 1:4928783/1‑150 (MQ=255) ccAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACAt < 2:1851697/150‑1 (MQ=255) ccAGCTGGGGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACAt < 2:2087264/150‑1 (MQ=255) ccAGCTCGTCGCGCGCGAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAatatat > 1:2813624/1‑150 (MQ=255) ccAGCCCGTCGCGCGCGAAATTG‑ACGCAGCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAatatat > 2:3755425/1‑150 (MQ=255) tggtggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCa > 1:2495738/1‑150 (MQ=255) gtggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAAt > 2:3488891/1‑150 (MQ=255) gtggCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAAt < 1:5363679/150‑1 (MQ=255) cgcgcgcgAAATTGAAGCA‑GCTGGCGGCGTTGCCAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATATATGGTCAATgc < 1:2828680/146‑1 (MQ=255) cTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATgcgc < 2:4928783/150‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCacga < 2:2494954/81‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa < 2:3842304/137‑1 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACa > 1:3842304/1‑137 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCa > 1:89402/1‑150 (MQ=255) tCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCa > 1:3216347/1‑150 (MQ=255) gAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTgc < 1:3825233/150‑1 (MQ=255) gAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTgc < 1:5068917/150‑1 (MQ=255) aTCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGcc < 2:1386717/150‑1 (MQ=255) tCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGACTACATGGTCAATGCGCACTGCGCCg > 2:4727274/1‑150 (MQ=255) gAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGAc < 2:2712821/150‑1 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCa < 2:1360478/72‑1 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCa > 1:1360478/1‑72 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCa > 1:1831871/1‑150 (MQ=255) gc‑gcCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCa < 2:4487851/150‑1 (MQ=255) cGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGAAGCCATCGt < 1:2290805/150‑1 (MQ=255) ggcgtggcCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGt < 1:501804/150‑1 (MQ=255) tggcCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTAtct < 1:3108021/150‑1 (MQ=255) gcCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTcc > 2:3428647/1‑150 (MQ=255) gcCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTcc > 1:1561621/1‑150 (MQ=255) gcCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTcc < 1:3975530/150‑1 (MQ=255) ccAAGGAATTCAACACCATTGCGGTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATATATGGTCAATGCCCATTGCGCCGACGCGATGGTCTGCATTTCCa > 1:4895703/1‑150 (MQ=255) ccAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCa > 1:2372124/1‑150 (MQ=255) cAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCaa > 1:1735020/1‑150 (MQ=255) cAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCCGTATCTCCaa > 1:1725792/1‑150 (MQ=255) aaGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAAc < 1:3584211/150‑1 (MQ=255) aaGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAAc > 1:4598162/1‑150 (MQ=255) aaGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAAc > 1:4260110/1‑150 (MQ=255) aGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACt < 1:297996/150‑1 (MQ=255) ttCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGATGCCGTGGAATACAGGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGAc > 2:3115610/1‑150 (MQ=255) aaCACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAg > 2:3416449/1‑150 (MQ=255) aaCACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAg < 1:4407549/150‑1 (MQ=255) cATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACCCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCAc < 1:1859869/150‑1 (MQ=255) aTCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCAcc > 2:1715594/1‑150 (MQ=255) aTCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCAcc > 2:3180588/1‑150 (MQ=255) tCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCAccc > 1:57377/1‑150 (MQ=255) tCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCAccc > 1:23373/1‑150 (MQ=255) ggTCGATGACGGTATCGCGATGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATATATGGTCAATGCCCATTGCGCCGACGCGATGGTCTGCATTTCCAACTGCGACAAGATCACTCCCgg > 1:119/1‑150 (MQ=255) cGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCAt < 2:4549498/150‑1 (MQ=255) cGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGAt > 2:4131661/1‑150 (MQ=255) ggCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGt > 2:3030964/1‑107 (MQ=255) gCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATgg < 2:23373/150‑1 (MQ=255) gCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATgg < 1:2124941/150‑1 (MQ=255) aTCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGgcc > 2:3159401/1‑150 (MQ=255) gCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGgccgcc < 2:458948/150‑1 (MQ=255) cgaTGGGCCATGACGGCATGCTCTATTCGCTGCCATCGCGCGAGCTGATTTCCGACTCGGTTGAATATATGGTCAATGCCCATTGCGCCGACGCGATGGTCTGCATTTCCAACTGCGACAAGATCACTCCCGGCATGCTGATGgcagcac > 2:4302630/3‑148 (MQ=255) ccATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGccc < 2:4775321/150‑1 (MQ=255) cATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGCCCt < 1:431698/150‑1 (MQ=255) cATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGCCCt > 1:1136031/1‑150 (MQ=255) aTGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGa > 2:584539/1‑121 (MQ=255) ggCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGCCCTgcgc > 2:5276845/1‑150 (MQ=255) | TCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGC‑GCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGATGACGGCATCGCCATGGGCCACGACGGCATGCTGTACTCGCTGCCAAGCCGCGAAATCATTGCCGACGCCGTGGAATACATGGTCAATGCGCACTGCGCCGACGCCATCGTCTGTATCTCCAACTGCGACAAGATCACCCCCGGCATGCTGATGGCCGCCCTGCGCCTG > NC_002947/5851389‑5851681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |