| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 435,328 | G→T | 6.6% | intergenic (‑126/‑324) | glcB ← / → PP_0357 | malate synthase G/ACT domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 435,328 | 0 | G | T | 6.6% | 532.8 / 16.8 | 163 | intergenic (‑126/‑324) | glcB/PP_0357 | malate synthase G/ACT domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (84/67); new base T (6/5); total (90/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
ACCGACTTGAACGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGACCCGTTGGTCGCGTATGGT > NC_002947/435179‑435477 | ccGACTTGAACGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGc < 1:4425054/150‑1 (MQ=255) cGACTTGAACGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCt > 1:3686273/1‑150 (MQ=255) aaCGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACCCGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCCGCCAGCCTGTCTGGCAGGc < 2:4994294/150‑1 (MQ=255) aaCGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGc > 2:4957957/1‑150 (MQ=255) aCGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCa < 1:1033836/150‑1 (MQ=255) aCGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCa > 1:5081981/1‑150 (MQ=255) tATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCCGCCAGCCTGTCTGGCAggc < 2:669992/150‑3 (MQ=255) aTCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAgtgt < 2:1551659/150‑1 (MQ=255) tCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGtgtg > 1:338070/1‑150 (MQ=255) ccAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGc < 1:631751/150‑1 (MQ=255) ccAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGc < 1:4820101/150‑1 (MQ=255) cAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCg > 2:4509063/1‑150 (MQ=255) aGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGt < 2:2002933/150‑1 (MQ=255) ttgcttgcCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTAtttt > 2:1079663/1‑150 (MQ=255) ccTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGgc > 1:1747025/1‑150 (MQ=255) ccTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGgc > 2:5368835/1‑150 (MQ=255) cTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGgcg > 1:2286714/1‑150 (MQ=255) tCACTCTGCTCAGCTATTTCGCTGTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCGTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGGAGTTTCGCAGgcgc > 2:1115054/1‑150 (MQ=255) ctctGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCtt < 1:3648126/150‑1 (MQ=255) tctGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTg > 1:2831174/1‑150 (MQ=255) tctGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTg > 1:2046724/1‑150 (MQ=255) ctGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTgg < 1:2119665/150‑1 (MQ=255) tGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGc < 1:4412820/150‑1 (MQ=255) gCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCTGTGTGCGTATTTTCACAGGCGCCTTGGCa < 2:3520662/150‑1 (MQ=255) gCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCa < 1:3100891/150‑1 (MQ=255) gCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCa < 2:4490349/150‑1 (MQ=255) tCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGc > 1:4579277/1‑125 (MQ=255) tCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGa > 1:5101075/1‑150 (MQ=255) tCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGGTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGc < 2:4579277/125‑1 (MQ=255) cTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCAGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGAAATc > 2:2132112/1‑150 (MQ=255) tttCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCaa > 1:1555008/1‑150 (MQ=255) tCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAac < 2:3686273/150‑1 (MQ=255) ctctTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAacgac < 2:231288/150‑1 (MQ=255) ctGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGtttt < 1:5224664/150‑1 (MQ=255) tGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTg < 2:727859/150‑1 (MQ=255) tGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTg < 2:4196250/150‑1 (MQ=255) gTATTAAGCCTGAAGCGCTTCTCAAAACACGGCACCAGAGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGATTTGt > 2:1490079/1‑150 (MQ=255) tATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTa > 1:3960829/1‑150 (MQ=255) tATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTa > 2:4591503/1‑150 (MQ=255) tATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTa < 1:4877997/150‑1 (MQ=255) ttAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGt > 2:3293776/1‑150 (MQ=255) aaGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTc < 1:3995264/149‑1 (MQ=255) aGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTAttt > 2:478996/1‑106 (MQ=255) gCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCcgc > 1:4267619/1‑150 (MQ=255) gCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCcgc > 1:4267452/1‑150 (MQ=255) gcgcTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACgg > 1:2546353/1‑150 (MQ=255) ttCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAta > 1:2805444/1‑150 (MQ=255) ttCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAta > 1:817735/1‑150 (MQ=255) tctAAACACGGCACCAGTGCATGCCCCCGGGGGTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAtacta < 2:303258/150‑1 (MQ=255) ctAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTcaca > 1:1116465/1‑95 (MQ=255) ctAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTcaca < 2:1116465/95‑1 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTa < 2:2235304/128‑1 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTa > 1:2235304/1‑128 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACa > 2:902259/1‑150 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACa > 2:3401963/1‑150 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACa > 2:3774563/1‑150 (MQ=255) tAAACACGGCACCAGTGCATGCCCCCGGGGTTGCGTGGGGGCGGCTGGGTGCGGCCTGCCAGACCGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCGTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACa > 2:2596806/1‑150 (MQ=255) aaCACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATg > 2:2502426/1‑150 (MQ=255) acGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAg < 1:1341521/150‑1 (MQ=255) cGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGc < 2:2360578/150‑1 (MQ=255) aCCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGc > 1:1772927/1‑62 (MQ=255) aCCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTa > 1:2138906/1‑150 (MQ=255) aGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTTCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGAGCCACGGGATACTACATGAAGCAGTGGGc > 2:774413/1‑150 (MQ=255) aGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGc > 2:1754355/1‑150 (MQ=255) tGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCgg < 2:2942450/150‑1 (MQ=255) gCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCggg < 2:2829255/150‑1 (MQ=255) aTGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGc > 1:2629585/1‑150 (MQ=255) aTGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGc > 1:2629595/1‑150 (MQ=255) ccccGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCaaaa > 2:1687079/1‑150 (MQ=255) ccGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATc > 2:2098895/1‑150 (MQ=255) ccGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATc > 2:624874/1‑150 (MQ=255) gggTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGa < 2:3183052/150‑1 (MQ=255) gggTTGCGTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATATTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGa < 2:2854219/150‑1 (MQ=255) gCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTaaa > 1:2792304/1‑150 (MQ=255) cTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTaaaa > 2:351195/1‑150 (MQ=255) cTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTaaaa < 2:157670/150‑1 (MQ=255) cTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTaaaa < 2:2558673/150‑1 (MQ=255) ttGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAtactac < 2:1451001/115‑1 (MQ=255) ttGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAtactac > 1:1451001/1‑115 (MQ=255) ttGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACAt < 1:4939245/117‑1 (MQ=255) ttGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAg > 1:3292887/1‑150 (MQ=255) ggcggcTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCg > 2:2966609/1‑150 (MQ=255) gcggcTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGt < 1:2942358/150‑1 (MQ=255) cggcTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGtt > 1:3337427/1‑150 (MQ=255) gcTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTAt > 1:3746909/1‑150 (MQ=255) cTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCTGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATg < 1:1495285/150‑1 (MQ=255) cTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATg < 2:1109480/150‑1 (MQ=255) tGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGAtac < 2:3074028/101‑1 (MQ=255) tGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTGAAAGCGCCGTTATGc < 2:5339991/150‑1 (MQ=255) tGGGTGCGGCCCGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGc < 1:4449156/150‑1 (MQ=255) gcacactgCCCGCCAGCCTGTCTGGCAGGCAGTGTGCGTAGTTTCCCAGGCGCCTTGGCAGACATCCAAACGACGTGGTGTAGTCCGCGCCACGGGATCCGACAGGAAGCAGTAGGCGGGGCAAGATCCGACTCAAAGCGCCGTTCTGCg > 2:1448881/8‑150 (MQ=255) ggTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGa < 2:5081981/150‑1 (MQ=255) gTGCGGCCTGCCAGACAGGCTGGCGGACAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGAc < 1:2308451/150‑1 (MQ=255) tgCCCGCCAGCCTGTCTGGCAGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCgg < 1:2947817/112‑1 (MQ=255) tgCCCGCCAGCCTGTCTGGCAGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCgg > 2:2947817/2‑113 (MQ=255) tgCCCGCCAGCCTGTCTGGCAGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTaaaa > 2:1528203/2‑131 (MQ=255) ggCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGACCCGt < 2:3757248/150‑1 (MQ=255) gCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACGACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGGTATGCGACCCggt > 1:4209015/1‑148 (MQ=255) aGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGACCCGTTGGTcgcg > 2:4417468/1‑150 (MQ=255) gCTGGCGGGCAGTTTGCGTATTTTCACAGGCGCCTTGGCAGACACCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGACCCGTTGGTCGCGTATGGt < 1:3046802/150‑1 (MQ=255) | ACCGACTTGAACGTATCCAGTCATTGCTTGCCTCACTCTGCTCAGCTATTTCGCTCTTCTGTATTAAGCCTGTAGCGCTTCTCTAAACACGGCACCAGTGCATGCCCCCGGGGTTGCTTGGGGGCGGCTGGGTGCGGCCTGCCAGACAGGCTGGCGGGCAGTGTGCGTATTTTCACAGGCGCCTTGGCAGACATCCAAACGACGTTTTGTAGTCCGCGCCACGGGATACTACATGAAGCAGTAGGCGGGGCAAAATCAGACTAAAAGCGCCGTTATGCGACCCGTTGGTCGCGTATGGT > NC_002947/435179‑435477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |