| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,884,678 | T→C | 9.8% | intergenic (+31/+17) | serA → / ← PP_5156 | bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,884,678 | 0 | T | C | 9.8% | 502.5 / 31.8 | 174 | intergenic (+31/+17) | serA/PP_5156 | bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (77/80); new base C (7/10); total (84/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
TGCAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTG > NC_002947/5884529‑5884827 | gCAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGGAAAAGGGAGGCCCtg < 1:2332490/150‑1 (MQ=255) gCAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCtg < 2:3621624/150‑1 (MQ=255) gCAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCtg < 2:1205354/150‑1 (MQ=255) cAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCtgg > 2:1326496/1‑150 (MQ=255) aCGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAATGGGAGGCCCTGGTGGCCTc > 1:2478491/1‑150 (MQ=255) aCGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGGCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTc > 2:3841979/1‑150 (MQ=255) gagaAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTccc < 1:1957259/150‑1 (MQ=255) gagaAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTccc > 1:1125566/1‑150 (MQ=255) agaAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCt < 2:5278668/150‑1 (MQ=255) aaaGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCttt < 2:2372118/150‑1 (MQ=255) aaaGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttt < 2:1980155/150‑1 (MQ=255) aGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCttttt > 1:3883554/1‑150 (MQ=255) aGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttttt < 2:1074572/150‑1 (MQ=255) aGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttttt < 1:3093066/150‑1 (MQ=255) cGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTa < 1:1714112/150‑1 (MQ=255) cGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTa < 1:4141667/150‑1 (MQ=255) gTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTAtt < 2:2220508/150‑1 (MQ=255) gTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTAtt > 2:72647/1‑150 (MQ=255) gTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCACTTTTTTTAtt < 2:2220432/150‑1 (MQ=255) gTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCtttt > 1:4817265/1‑144 (MQ=255) gTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCtttt < 2:4817265/144‑1 (MQ=255) ttACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTAttt < 2:2429029/150‑1 (MQ=255) gATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTg > 1:4271255/1‑150 (MQ=255) gATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTg > 2:2515918/1‑150 (MQ=255) aTGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttt < 1:2199972/128‑1 (MQ=255) aTGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttt > 2:2199972/1‑128 (MQ=255) cGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATcttctt < 1:2579766/150‑1 (MQ=255) cGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATcttctt < 2:1986156/150‑1 (MQ=255) ccGAGTACTCGGACCTGGCGCAGGAAAAACAGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCATGTTCTAAGGTAGCTGGCGGTATGAAAAAGTGAGGCCATGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTtcg > 2:5008251/1‑150 (MQ=255) aCTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTtcgactcga < 1:4537357/150‑1 (MQ=255) tCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACg > 1:4453055/1‑150 (MQ=255) tCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACg > 1:1871317/1‑150 (MQ=255) tCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCACTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACg > 1:1299762/1‑150 (MQ=255) ggACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCt < 1:3890168/150‑1 (MQ=255) gACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTa < 1:2423882/150‑1 (MQ=255) ccTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAgg < 1:1646230/150‑1 (MQ=255) cgcAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGa < 2:1663761/150‑1 (MQ=255) cgcAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGa > 1:1738036/1‑150 (MQ=255) gcAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTGCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGaa > 1:4852566/1‑150 (MQ=255) ggAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATgg < 2:4898951/150‑1 (MQ=255) ggAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATgg > 1:2982216/1‑150 (MQ=255) gAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGATGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGc < 2:22448/150‑1 (MQ=255) aaaaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGca < 1:908650/150‑1 (MQ=255) aaaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGcac > 1:2271230/1‑150 (MQ=255) aaaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGcac > 2:2139996/1‑150 (MQ=255) aaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGcaca < 2:2751367/150‑1 (MQ=255) aaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGcaca < 2:3343282/150‑1 (MQ=255) aaaCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGcaca < 1:909838/150‑1 (MQ=255) aCTGGAAGAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAATGGGAGGCGGTGGTGGCGTCGCTTTTTTTATTTCAGTTCAAGCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATg > 2:1536715/1‑150 (MQ=255) aCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATg < 1:287305/150‑1 (MQ=255) aCTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATg < 1:287204/150‑1 (MQ=255) cTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGa < 1:615348/150‑1 (MQ=255) tGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGAt > 1:2106070/1‑150 (MQ=255) cAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATAc < 1:4010708/150‑1 (MQ=255) aaCAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCt < 1:4390594/80‑1 (MQ=255) aaCAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCt > 2:4390594/1‑80 (MQ=255) tCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCAc < 1:2511699/150‑1 (MQ=255) tCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttt < 2:2771570/80‑1 (MQ=37) tCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCACCAGGGCCTCCCttt > 1:2771570/1‑80 (MQ=37) cAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCAcc < 2:624059/150‑1 (MQ=255) gCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGaa > 1:3575004/1‑150 (MQ=255) gCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGaa < 1:3444318/150‑1 (MQ=255) aCCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATc < 2:378282/150‑1 (MQ=255) ccATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAACAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCa < 2:2703420/150‑1 (MQ=255) cATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCTGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCGCTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAg < 2:2935115/150‑1 (MQ=255) cATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAg > 2:2287071/1‑150 (MQ=255) ctCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGt < 2:3747384/149‑1 (MQ=255) tCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGtt < 1:3787848/150‑1 (MQ=255) cgcgTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGgtg > 2:3970861/1‑150 (MQ=255) gTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGc < 1:1727915/150‑1 (MQ=255) cTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTg < 1:334883/150‑1 (MQ=255) tGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTg < 1:4859611/118‑1 (MQ=255) tGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGc > 2:4697579/1‑150 (MQ=255) ttCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGAt < 2:228014/74‑1 (MQ=255) ttCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGAt > 1:228014/1‑74 (MQ=255) tAAGGTCGCTGGCGGTATGAAAAATGGAGGACCTTGTGCCCTCACTTTATTTATTTCACTTCAAACGTCATATTCTTCGACACGAAGCTAGGCTTGAATGGCACAAGATACTGGAAACCCAGAATCATTTGAAGGGAGAGCTAGCCCggg > 2:2671418/1‑150 (MQ=255) gTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGc < 2:130414/137‑1 (MQ=255) gTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCa > 1:414876/1‑150 (MQ=255) tCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAg < 1:3341182/150‑1 (MQ=255) cGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAgg < 1:2014277/150‑1 (MQ=255) gCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAggg > 1:4088177/1‑150 (MQ=255) cTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACGGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGt > 2:1732578/1‑150 (MQ=255) gCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAAt > 2:2444663/1‑150 (MQ=255) gCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAAt > 1:107807/1‑150 (MQ=255) gTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTGCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCt < 2:4852566/150‑1 (MQ=255) aTGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTgg < 2:1945972/150‑1 (MQ=255) aaaaaaGGGAGGCCACCAGGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGtt > 2:2809587/2‑150 (MQ=255) aaacaGGGATGCCCTGGTGGCCTCACTTTTTTTATTTCGATTCAACCGTGATCTTCTTCGACTCGACGATAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGttt < 2:3745186/150‑1 (MQ=255) aaaaaGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCGCTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGttt > 1:3745186/1‑150 (MQ=255) aaaGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCg < 1:3277889/150‑1 (MQ=255) aaaGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCg < 2:5029071/150‑1 (MQ=255) ggAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCt < 1:5327684/150‑1 (MQ=255) aGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCtgt < 1:5198366/150‑1 (MQ=255) aGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCtgt < 2:5165071/150‑1 (MQ=255) gCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGc < 1:3970861/150‑1 (MQ=255) gCCCTGGTGGCCTCCCTTATTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGc < 2:5326907/150‑1 (MQ=255) ccTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCt > 2:1262482/1‑150 (MQ=255) ccTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCt > 2:1513865/1‑150 (MQ=255) cTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCtt < 1:2139996/150‑1 (MQ=255) cTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCtt < 1:1465923/150‑1 (MQ=255) | TGCAGACCAACGAGAAAGTCGGTTACGTGGTAATCGATGTTGACGCCGAGTACTCGGACCTGGCGCAGGAAAAACTGCAACAGGTCAAAGGCACCATCCGTTCGCGCGTCCTGTTCTAAGGTCGCTGGCGGTATGAAAAAGGGAGGCCCTGGTGGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTG > NC_002947/5884529‑5884827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |