| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 444,580 | G→C | 5.9% | intergenic (+59/‑115) | bioD → / → PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 444,580 | 0 | G | C | 5.9% | 540.7 / 12.4 | 169 | intergenic (+59/‑115) | bioD/PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (66/92); new base C (7/4); total (73/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
CGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTC > NC_002947/444433‑444728 | cGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGtt < 1:4155001/150‑1 (MQ=255) ggCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTtg > 2:2855630/1‑150 (MQ=255) gcgcCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTtgt < 2:1498657/150‑1 (MQ=255) cgcCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTtgtg < 2:1766023/150‑1 (MQ=255) gcCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTgg < 2:4956669/150‑1 (MQ=255) gcCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTgg < 1:966720/150‑1 (MQ=255) cTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGgc > 2:1229740/1‑150 (MQ=255) ccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg < 2:3462689/150‑1 (MQ=255) ccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg < 1:650457/150‑1 (MQ=255) ccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg < 1:4694641/150‑1 (MQ=255) ccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg < 1:650473/150‑1 (MQ=255) ccTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCgg < 2:3462783/150‑1 (MQ=255) cTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCggg < 1:2808808/150‑1 (MQ=255) cTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCggg < 1:4344469/150‑1 (MQ=255) ctcctgggTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGtt < 1:3516896/145‑1 (MQ=255) gggTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTAccc < 2:1525116/150‑1 (MQ=255) ggTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcg > 2:3120559/1‑150 (MQ=255) cccAAGCTCAAGCAGGCCAGTGCCGTCATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCgaa < 1:554039/150‑1 (MQ=18) cccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCgaa < 1:554037/150‑1 (MQ=21) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag < 2:4940766/150‑1 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 2:524997/1‑150 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 2:525099/1‑150 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGGTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 2:4555320/1‑150 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGgc > 1:5094723/1‑131 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGgc < 2:5094723/131‑1 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga > 1:2701678/1‑150 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga > 2:395361/1‑150 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGttt < 1:1004062/139‑1 (MQ=21) aaGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaagaa < 1:3673760/150‑1 (MQ=255) gCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGc < 2:1018017/150‑1 (MQ=255) tCAAGCTGGCCAGTGCCGACTTGGTGGCTGAGCATCTGAAAGTGGATCTGGTGGATTTGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGGGGGTTTACCCGCGAAGAAGCCa < 1:5156194/150‑1 (MQ=38) tCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTAccc < 1:1660656/138‑1 (MQ=255) aaGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGt > 2:4280383/1‑150 (MQ=255) tgccggCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTg > 2:941198/5‑150 (MQ=255) aGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTg > 1:416831/1‑150 (MQ=255) aGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTGGGTTGCAGGCCCGGCCTATTCGGGGGTAAACCCGCTCATACGTGGGAACGCTTACCGTTGTGGGCGCGGGTTTACCCGCTAAGAAGCCAGTGCAg < 1:3023457/150‑1 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcgcg < 2:1459112/133‑1 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGa > 2:4596207/1‑150 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGa > 2:4596357/1‑150 (MQ=255) gCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCGCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCcgcg > 1:1459010/1‑133 (MQ=255) ccAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGaa < 1:1069842/150‑1 (MQ=255) cGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa > 2:4176180/1‑150 (MQ=255) cGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa < 2:1932597/150‑1 (MQ=255) cGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa < 2:2999735/150‑1 (MQ=255) aCATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAgg < 1:1703882/150‑1 (MQ=255) gCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGCAGAAGCCAGTGCAGGAATACCCAAGGCCTATCaa > 2:2204218/1‑150 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGTTTTGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACt < 1:36224/150‑1 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGTTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACt < 1:36417/150‑1 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACt < 1:4802161/150‑1 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACt > 1:2201396/1‑150 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCACCTACGAGGGAACGCATAACGTTGTGGGCGCGGGGTTACCCGCGAAGAAGCCAGTGCAGGAATACCAAAGGCCTATCaaat > 1:1158355/1‑148 (MQ=255) gAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGCACGCATACCGTGGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTg < 2:1682193/150‑1 (MQ=255) gAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAAACCGCGCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGGTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCGaacaacag > 1:557898/1‑148 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAg > 2:1238387/1‑120 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAg < 1:1238387/120‑1 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa < 2:3386370/150‑1 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa < 1:4763379/150‑1 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATAACGGTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa > 1:474226/1‑150 (MQ=255) cAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTAGCGGGTAAACCCCCTCCTACGAGGGAACGCAAACCCTTGTGGGCGCGGGGTTTCCCCCGAAGAAGCCAGTGCAGGAAAACCCAACGCCTATCAACTGGCAATGatc > 1:1896498/1‑148 (MQ=255) aaCTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAACCCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGcc < 1:1486264/150‑1 (MQ=255) aCTGGATCTGCTGGTTTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGTTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCa < 1:1834778/150‑1 (MQ=255) gATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAg < 1:2740713/150‑1 (MQ=255) gATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATAAACAGGCATTGAGGCATTAg > 1:3397562/1‑150 (MQ=255) tgctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGAt > 2:2835575/1‑150 (MQ=255) ctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGAttt > 2:3972652/1‑150 (MQ=255) aTTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGATGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAAc < 1:4921682/150‑1 (MQ=255) tAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACgg < 2:4796415/150‑1 (MQ=255) tCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTTGGGATTTAAACggggg > 2:1535360/1‑148 (MQ=255) tCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGcc < 1:3883834/150‑1 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGCAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCCTTGAGCCATTAGGGATTTAAACGGGCCtt > 2:2544490/1‑150 (MQ=255) tGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTa > 2:329554/1‑132 (MQ=255) tGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTc < 2:69305/150‑1 (MQ=255) ggCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc < 1:1748657/150‑1 (MQ=255) ggCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc < 1:2855630/150‑1 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa < 1:323775/150‑1 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa > 2:4696903/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTg < 1:3166081/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGttt > 1:1311129/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACGAGGGACCGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAGTAGGGATTTAAACGGGCCTTTTCGCCCCTCGCCTGTTGTaa > 2:830591/1‑150 (MQ=255) gggTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAAtt < 2:3267216/150‑1 (MQ=255) ggTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTg > 2:1835274/1‑150 (MQ=255) gTAACCCCGCTCCTACGCGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 1:941198/150‑1 (MQ=255) gTAACCCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGTTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 1:4581076/150‑1 (MQ=255) gTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 1:4581047/150‑1 (MQ=255) gTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGc > 2:166451/1‑122 (MQ=17) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:1486163/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:4999072/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 2:1311129/150‑1 (MQ=255) tAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTGTACCCGCGACGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg < 1:4103339/150‑1 (MQ=255) tAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTggg > 2:728264/1‑150 (MQ=21) aaCCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGc > 2:733812/1‑150 (MQ=255) aCCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTaaa < 2:214772/113‑1 (MQ=255) cccGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTg > 2:3840930/1‑150 (MQ=255) aCGAGGGAACGCATACCGTTGTGGGCGCGGGATTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATGAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTATGTGGGGCTGTGCGTCATc > 1:894109/1‑150 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt < 2:4102705/150‑1 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt < 2:3678247/150‑1 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt > 1:3695269/1‑150 (MQ=255) tACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGa < 1:851548/150‑1 (MQ=255) ccGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATgggta > 1:2622277/1‑147 (MQ=255) cGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTc > 2:1884004/1‑150 (MQ=255) | CGGCGCCTTGCCTGGGGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTC > NC_002947/444433‑444728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |