| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,916,104 | C→G | 7.9% | intergenic (+18/+135) | spuI → / ← argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,916,104 | 0 | C | G | 7.9% | 450.9 / 22.6 | 140 | intergenic (+18/+135) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (49/79); new base G (4/7); total (53/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
AGCGAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTC > NC_002947/5915955‑5916253 | aGCGAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTc > 1:1021337/1‑150 (MQ=255) cGAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCaa < 2:2422862/150‑1 (MQ=255) cGAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCaa < 2:5316985/150‑1 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg < 2:1630702/150‑1 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg < 2:1448289/150‑1 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg > 1:2817926/1‑150 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg < 1:2796664/150‑1 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg < 2:4194969/150‑1 (MQ=255) gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAg > 1:4929133/1‑150 (MQ=255) cTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggcggc < 2:4244967/150‑1 (MQ=255) cTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGggcggc < 1:2809934/150‑1 (MQ=255) cTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCGGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGggcggc < 2:1124963/150‑1 (MQ=255) aaCAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGtt < 1:41455/150‑1 (MQ=255) aaGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGttttc < 2:1303327/150‑2 (MQ=255) tACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGtttttttt > 1:3000112/1‑150 (MQ=255) aCATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt < 2:3142105/150‑1 (MQ=255) aTCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTga < 1:26427/150‑1 (MQ=255) aTCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTga > 1:1546817/1‑150 (MQ=255) tCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTttcgtttaca < 1:1693064/150‑4 (MQ=38) cGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTgaga < 1:2335505/150‑1 (MQ=255) tCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGGACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTATTTGTTTGAGACCg < 2:3949835/150‑1 (MQ=255) gAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttttt < 2:3814066/136‑1 (MQ=255) gAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttttt > 1:3814066/1‑136 (MQ=255) aGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTC < 1:186244‑M1/150‑1 (MQ=255) gTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCG > 2:1956672‑M1/1‑150 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgtttgca > 2:5345786/1‑133 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgtttgca < 1:5345786/135‑3 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCac > 1:2741960‑M1/1‑148 (MQ=255) cGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT < 1:2694583‑M1/150‑1 (MQ=255) gACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTT < 1:1435991‑M1/150‑1 (MQ=255) cTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGG < 2:1968080‑M1/150‑1 (MQ=255) ttCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGG < 1:4751018‑M1/150‑1 (MQ=255) tcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG < 2:4147726‑M1/150‑1 (MQ=255) cgTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC < 1:1396186‑M1/150‑1 (MQ=255) gCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑T < 1:2674811‑M1/150‑1 (MQ=255) aaGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:864372‑M1/150‑4 (MQ=255) aaGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGC < 1:1222367‑M1/139‑1 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttt < 1:1788331/104‑1 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttt > 2:1788331/1‑104 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTACATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaaga < 2:4453421‑M1/150‑6 (MQ=255) gAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGc > 2:3250135/1‑150 (MQ=255) aaaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCa < 1:343209/150‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacag < 1:2282838‑M1/150‑5 (MQ=255) cGAGCTGGAAGAGTGCGAGCACTCGATCTCCGCCCTCGAGTACAACTGGTACCTGCAGACCGTGTAAACGAAAACGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGt < 1:3891431/150‑1 (MQ=255) tGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAAttt < 1:347878/150‑1 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCCTACCGTGTAAACAAAAACGCCGCCCCTCCAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc < 2:4171855/150‑1 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCGCTTCGCGGGGACGCCCCC‑CCCCGCCGGGGAAtgtg > 1:4361576/1‑147 (MQ=255) aaGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGa < 1:3250135/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4053457/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:1622229/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4458494/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4338592/150‑1 (MQ=255) gagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAg < 2:1530675/150‑1 (MQ=255) gAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa > 2:3747772/1‑143 (MQ=255) gCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGc < 2:5364261/150‑1 (MQ=255) cTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCtg < 1:4952560/150‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc > 2:558556/1‑134 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc < 1:558556/134‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt < 2:4197256/150‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt < 1:3846467/150‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt > 2:3007553/1‑150 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAATCGAAATCGCCGCCCCTCAAGGGCGGCGTGTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGC‑TCCCGCAGGGTAATTTCGCAGGCTGAAGCCTGTGa > 2:5235486/1‑150 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCT > 2:322761‑M1/1‑97 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGGGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCT < 1:322761‑M1/97‑1 (MQ=255) ctcCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACtt < 2:1953376/150‑1 (MQ=255) aCCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctg < 1:2790650‑M1/150‑40 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGC‑GCCCCCACGGGAATTTCGAAGGGTGAAGCCTGTGGCTTAACAGTgg < 1:2699769‑M2/150‑3 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACGTACCGGTgg < 2:313428‑M2/150‑3 (MQ=255) aCAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgg > 2:4957686‑M2/1‑142 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc < 1:5157354‑M1/150‑51 (MQ=255) cTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAAATTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt < 2:3018463‑M2/150‑13 (MQ=255) tGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC < 2:5291000‑M1/91‑1 (MQ=255) tGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC > 1:5291000‑M1/1‑91 (MQ=255) ggTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgc > 2:4929133‑M2/1‑136 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa > 2:3932935‑M1/1‑91 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:3932980‑M1/94‑4 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:3932935‑M1/94‑4 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcc > 1:2580550‑M2/1‑135 (MQ=255) aCCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCAAATCGCGGGCCCGCCCGC‑ACCCCCAGGGTAATTTCGAAGGGTGGAGCCCGTGCCTTACCGGTggggccgggcgtgcccg < 2:3335309‑M2/150‑18 (MQ=255) ccTGCATACCGTGTAAACGAAACCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTAATCTCGACGGCTGAAGCCTGTGACTTCCCTGTgggagcgggcgtgcccgc > 2:4741769‑M2/1‑132 (MQ=255) tGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcga > 2:4448852‑M2/1‑130 (MQ=255) ctaCCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCTGGGTAATTTCGAAGGCTGAAGCCTGTGACTTCCCTGGgggcgcgggcgtgcccgcgaaga > 2:2339949‑M2/2‑127 (MQ=255) aTACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGATTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaaga > 2:3125376‑M2/1‑127 (MQ=255) gtgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgg < 2:2633628‑M1/130‑49 (MQ=255) gtgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgg > 1:2633628‑M1/1‑82 (MQ=255) aaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCC‑GCCCGCCGGGTAATTTCGAAGGCTGAAGCCGGTGAATTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGccc > 2:1545609/1‑150 (MQ=38) aaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCATAGCGGGCCCGCCCGC‑TCCCCCAGGGTAAATTCGAAGGCGGGACCCAGTGACGTACCAGTGGGAGCGGGCGTGCCCGCGCAGAGGGCGGccc > 1:2723062/1‑150 (MQ=25) aaCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTAGCGGGCCACCCCGC‑ACCCGCACGGTAATTTCGAAGGCTGGAGCCGGTGGCTTACCGGTTGGAGCCGGGGGGCCCCCGGAGGGGGCGGcccc > 2:52633/1‑149 (MQ=255) gAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCGCGTCGCGGGCCCGCCCCC‑GCCCGCAGGGTAAATTCGGAGGCTGAAGCCAGGGGCATAACAGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAAGc > 1:1754926/1‑150 (MQ=255) aaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTCATTTCGAAGGCTGAAGCCGGGGACGTACCGGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCtt > 2:1339879/1‑150 (MQ=38) aaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTAATTTCGAAGGCTGAAGCCGGGGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGcgt > 2:1339935/1‑148 (MQ=38) aaaCGCCGCCCCTCAAGGGCGGCGTTTTTGGTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCC‑ACCCCCAGGGTAAGTTCGAAGGCGGTAGCCGGTTACTTACCAGGGGGGGCGGGCGTGCCCGCGGAGTGGGCGGCCCAGGCtt > 2:125969/1‑150 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGCCCCCCC‑TCCCGCAGGGTTATTTCGAAGGCGGAAGCCTGTGTCATACCTGTGGGTGCGGGCGGGCCCCCGTAGAGGGCGGCCCAGGCGTa > 2:2051679/1‑150 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt < 2:1201801‑M2/123‑13 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt > 1:1201801‑M2/1‑111 (MQ=255) cgccgcCCCTCCCGGGCGGCGTTTTTTTTTGCGACCGGTTTCGCCCTCTGCGGGGGCCCGCCCGC‑TCCCGCTGGTTATTTTCGAGGGCTCACGCCTTTGAGTTACCTGTGGGCGGGGGGGTCCCCGCGAAGAGGGCGGCCCAGGCTTACa < 2:2817926/150‑1 (MQ=255) cgccgcCCCTACCGGGCGGCTTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGAAGGGTAATTTCGAAGGCTGAAGCCCGTGACTTACCTGTGGTAGGGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACa < 2:4361576/150‑1 (MQ=255) cTCATGGGCGGCTTTTTTTTTTGTGACCGGTGTCGCCCTATTCGCGGGCACGCCCGC‑TCCCGCAGGTTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTtc < 2:2683839/150‑1 (MQ=38) cTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCAAGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCGGGGACGTAACTGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCGTACAGGGGCGtc > 2:327890/1‑150 (MQ=255) tCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCGTCGCCGGCACCCCCCCAACCCCCAGGG‑AATTTAGAAGGCGGAAGCCAGTGACAAAACATTGGGAGCGGGCGGGCCCCCGCATACGGCGGCCCACGCGTTCAGGGGCAtca > 2:4565691/1‑149 (MQ=255) | AGCGAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTC > NC_002947/5915955‑5916253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |