| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,916,151 | A→G | 6.5% | intergenic (+65/+88) | spuI → / ← argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,916,151 | 0 | A | G | 6.5% | 356.8 / 8.5 | 126 | intergenic (+65/+88) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (56/54); new base G (3/5); total (64/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
TCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCG > NC_002947/5916004‑5916300 | tcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG < 2:4147726‑M1/150‑1 (MQ=255) gcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGc < 1:3561638‑M1/20‑1 (MQ=255) gcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGc > 2:556111‑M1/131‑150 (MQ=255) cgTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC < 1:1396186‑M1/150‑1 (MQ=255) cgTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC < 1:2660046‑M1/150‑1 (MQ=255) ctgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCGCGCCCg < 1:5363774‑M1/23‑1 (MQ=255) tgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCGCTTAGCGGGGccgcccgc < 1:3762855‑M1/24‑1 (MQ=255) gCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑T < 1:2674811‑M1/150‑1 (MQ=255) cgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑Tc > 2:873947‑M1/125‑150 (MQ=255) cgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑Tc > 2:280767‑M1/125‑150 (MQ=255) aaGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:864372‑M1/150‑4 (MQ=255) aaGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCC < 2:1321479‑M1/150‑1 (MQ=255) cactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑Tccc > 1:4925342‑M1/123‑150 (MQ=255) aaaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCa < 1:343209/150‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacag < 1:2282838‑M1/150‑5 (MQ=255) cGAGCTGGAAGAGTGCGAGCACTCGATCTCCGCCCTCGAGTACAACTGGTACCTGCAGACCGTGTAAACGAAAACGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGt < 1:3891431/150‑1 (MQ=255) gagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAAttt > 2:3225653‑M1/111‑150 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCCTACCGTGTAAACAAAAACGCCGCCCCTCCAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc < 2:4171855/150‑1 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCGCTTCGCGGGGACGCCCCC‑CCCCGCCGGGGAAtgtg > 1:4361576/1‑147 (MQ=255) aaGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGa < 1:3250135/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:1622229/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4458494/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4338592/150‑1 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 2:4053457/150‑1 (MQ=255) agTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAgg < 1:689260/150‑1 (MQ=255) tttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTg < 1:435617‑M1/49‑1 (MQ=255) gAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa < 1:3747772/143‑1 (MQ=255) gAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGaa > 2:3747772/1‑143 (MQ=255) cTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCtg < 1:4952560/150‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc > 2:558556/1‑134 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTc < 1:558556/134‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACGGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGACGGCTGAAGCCtgt < 2:4277790/150‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAATCGAAATCGCCGCCCCTCAAGGGCGGCGTGTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGC‑TCCCGCAGGGTAATTTCGCAGGCTGAAGCCTGTGa > 2:5235486/1‑150 (MQ=255) ctcCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACtt < 2:1953376/150‑1 (MQ=255) gtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTAc < 2:4241382‑M1/64‑1 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGGCCGCCCCC‑GCCCGCCCGGGTATTTTGGTTGCGGAAGCCAGTGGCTTAcc > 1:2889119/1‑150 (MQ=255) ggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCt > 2:3968193‑M1/85‑150 (MQ=255) gACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCt < 1:1366919/150‑1 (MQ=255) aCCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctg < 1:2790650‑M1/150‑40 (MQ=255) ccTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGATTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgt < 2:3194385/150‑1 (MQ=255) gcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgtg > 1:4241382‑M1/82‑150 (MQ=255) cTCGTGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTg > 2:3060991‑M2/1‑149 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGC‑GCCCCCACGGGAATTTCGAAGGGTGAAGCCTGTGGCTTAACAGTgg < 1:2699769‑M2/150‑3 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGCCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgg < 1:1764085‑M1/150‑43 (MQ=255) cggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgg > 2:1711223‑M1/81‑150 (MQ=255) gcggccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagccccggtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTACTTTCGCAGGCTGAAGCCTGTGACTTACCGGTGGGa > 2:5198825‑M1/79‑150 (MQ=255) tACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTGGTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑ACCCGCAGGGTAATTTCGAAGGCTGGAGCCGGTGACTTACCTGGgggcgcg < 2:3269329‑M2/150‑8 (MQ=255) ccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCgg > 2:1920362‑M1/75‑150 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAACACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGCCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc < 1:1928202‑M1/150‑51 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc < 1:5157354‑M1/150‑51 (MQ=255) cTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAAATTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt < 2:3018463‑M2/150‑13 (MQ=255) tGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC < 2:5291000‑M1/91‑1 (MQ=255) tGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCC > 1:5291000‑M1/1‑91 (MQ=255) ggTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgc > 2:4929133‑M2/1‑136 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa > 2:3932980‑M1/1‑91 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa > 2:3932935‑M1/1‑91 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:3932980‑M1/94‑4 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGTGCCCGCgaa < 1:3932935‑M1/94‑4 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcc > 1:2580550‑M2/1‑135 (MQ=255) ccTGCATACCGTGTAAACGAAACCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTAATCTCGACGGCTGAAGCCTGTGACTTCCCTGTgggagcgggcgtgcccgc > 2:4741769‑M2/1‑132 (MQ=255) tGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcga > 2:4448852‑M2/1‑130 (MQ=255) cttcgctttacaactacccgcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCTGGTTAATTTCGAAGGCTGATGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGaa > 1:877401‑M1/62‑150 (MQ=255) ctaCCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCTGGGTAATTTCGAAGGCTGAAGCCTGTGACTTCCCTGGgggcgcgggcgtgcccgcgaaga > 2:2339949‑M2/2‑127 (MQ=255) aTACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGATTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaaga > 2:3125376‑M2/1‑127 (MQ=255) gtgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgg < 2:2633628‑M1/130‑49 (MQ=255) aaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCC‑GCCCGCCGGGTAATTTCGAAGGCTGAAGCCGGTGAATTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGccc > 2:1545609/1‑150 (MQ=38) aCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAg > 2:5363774/1‑150 (MQ=255) aCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCC‑AGCCCCAGGGTAATATTGAATGCAGAAGACTTTTACATACCAGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAg > 2:4189255/1‑150 (MQ=255) gAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCGCGTCGCGGGCCCGCCCCC‑GCCCGCAGGGTAAATTCGGAGGCTGAAGCCAGGGGCATAACAGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAAGc > 1:1754926/1‑150 (MQ=255) aaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTCATTTCGAAGGCTGAAGCCGGGGACGTACCGGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCtt > 2:1339879/1‑150 (MQ=38) aaaCGCCGCCCTTGAGGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTAATTTCGAAGGCTGAAGCCGGGGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGcgt > 2:1339935/1‑148 (MQ=38) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCGCCCCCCC‑TCCCGCAGGGTTATTTCGAAGGCGGAAGCCTGTGTCATACCTGTGGGTGCGGGCGGGCCCCCGTAGAGGGCGGCCCAGGCGTa > 2:2051679/1‑150 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt > 1:1201801‑M2/1‑111 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt < 2:1201801‑M2/123‑13 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcggg > 1:5059419‑M2/1‑111 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcggg < 2:5059419‑M2/120‑10 (MQ=255) cgccgcCCCTCCCGGGCGGCGTTTTTTTTTGCGACCGGTTTCGCCCTCTGCGGGGGCCCGCCCGC‑TCCCGCTGGTTATTTTCGAGGGCTCACGCCTTTGAGTTACCTGTGGGCGGGGGGGTCCCCGCGAAGAGGGCGGCCCAGGCTTACa < 2:2817926/150‑1 (MQ=255) cgccgcCCCTACCGGGCGGCTTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGAAGGGTAATTTCGAAGGCTGAAGCCCGTGACTTACCTGTGGTAGGGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACa < 2:4361576/150‑1 (MQ=255) cTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCAAGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCGGGGACGTAACTGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCGTACAGGGGCGtc > 2:327890/1‑150 (MQ=255) cTCAAGGGCGGCGGTTTTGTTAGAGACCGGAGTCGCCCTCATCTCGGGCACGCCCCC‑TCCCGCAGGGTAATTTCGAAGGCGGAACCCTGTGACTTAACGGGTTGAGCCGCCGTGGCCCCGAAGGGGGCGGCCCAGCCGTACGCGGGCttg > 2:5315398/1‑149 (MQ=255) tCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCCCAGGGTAAATTCGAAGGCGGAAGCCGGTGACTTACCAGTGGGAGCGGGCGTGCCCCCGAAGAGGGCGGCCCAGGCATACACGGGCTtcg > 2:3379728/1‑149 (MQ=255) tCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCGTCGCCGGCACCCCCCCAACCCCCAGGG‑AATTTAGAAGGCGGAAGCCAGTGACAAAACATTGGGAGCGGGCGGGCCCCCGCATACGGCGGCCCACGCGTTCAGGGGCAtca > 2:4565691/1‑149 (MQ=255) ggcggcTTTTTGGTTTGAGCCGGTTGTCGCCCTCTTCGCGGGCACGCCCGC‑CCCGGCAGGGTATTTTCCATGGCTGAAGCGTTTGAGTTACCTGTGGGTGGGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGaaa < 2:1021337/150‑1 (MQ=255) aCCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGCATTGCGCTggg > 2:3581118/1‑149 (MQ=255) ggTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGt > 2:3180174/1‑150 (MQ=255) GCCCTCTTCGCGGGCACGCCCGC‑GCCCGCAGGGTCATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCCGGCGTACAGGGGCTTCTCGAAAAACTACGAATTGCGCTGGTAGTTGTACa < 2:2844936‑M1/150‑1 (MQ=255) CCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCAGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGc < 2:3044342‑M1/150‑1 (MQ=255) tctTCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaatcgccgcccttgaggggcggcgttttcgtttacacggtat > 2:3125376‑M1/1‑23 (MQ=255) tctTCGCGGGCACGCCCGC‑GCCCccagggaagtcacaggcttcagccttcgaaattacccagcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtag > 2:2339949‑M1/1‑23 (MQ=255) TCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGa < 2:3118812‑M1/150‑1 (MQ=255) cggCGCGGGCACGCCCGC‑CCCCGCAGGGTAATTTCGACGGCTGAAGCCTGTGAGTTCCGTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGaa > 2:1546817‑M1/4‑150 (MQ=255) TTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGTGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAAGTGCGCTGGTAGTTGTACAGCGAAg < 2:4778261‑M1/150‑1 (MQ=255) tCGCGGGCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgca > 2:4448852‑M1/1‑20 (MQ=255) gcgGGCACGCCCGC‑TCCCacagggaagtcacaggcttcagccgtcgagattaccctgcgggcgcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcggtttcgtttacacggtatgcagg > 2:4741769‑M1/1‑18 (MQ=255) cgGGCACGCCCGG‑CCCCaccggtaaggcacgggctccacccttcgaaattaccctgggggtgcgggcgggcccgcgatttgggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggt < 2:3335309‑M1/150‑134 (MQ=255) ggCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtac > 1:2580550‑M1/1‑15 (MQ=255) gCACGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtacc > 2:4929133‑M1/1‑14 (MQ=255) aCGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaatttaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccag < 2:3018463‑M1/150‑139 (MQ=255) aCGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgtt < 2:1201801‑M1/123‑112 (MQ=255) aCGCCCGC‑TCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgtt > 1:1201801‑M1/1‑12 (MQ=255) | TCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGC‑TCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCG > NC_002947/5916004‑5916300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |