| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,950,660 | T→A | 5.1% | intergenic (‑63/+19) | PP_mr62 ← / ← trxA | Pseudomon‑Rho regulatory region/thioredoxin I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,950,660 | 0 | T | A | 5.1% | 583.8 / 14.5 | 176 | intergenic (‑63/+19) | PP_mr62/trxA | Pseudomon‑Rho regulatory region/thioredoxin I |
| Reads supporting (aligned to +/- strand): ref base T (106/60); new base A (3/6); total (110/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.31e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCGGGGTT > NC_002947/5950511‑5950808 | cgccgcTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCAt < 2:3968151/150‑1 (MQ=255) cgcTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTg > 1:1905929/1‑150 (MQ=255) gcTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGc > 2:3640240/1‑150 (MQ=255) cTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCg > 1:3926554/1‑150 (MQ=255) cTGGAACGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTATTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCg < 2:2904063/150‑1 (MQ=255) tGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCAAATGCgg < 1:3910416/150‑1 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCtttt < 2:5171215/150‑1 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCtttt > 2:1978317/1‑150 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCtttt > 2:5531/1‑150 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCtttt > 2:1119569/1‑150 (MQ=255) gACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCtctt > 2:4340687/1‑150 (MQ=255) aCAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtc > 1:2358199/1‑150 (MQ=255) aCAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtc > 1:2358342/1‑150 (MQ=255) aGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAG‑GCCCCGCAAATGCGGGGCttttcttt < 1:2231905/150‑5 (MQ=255) ggATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGCttttcttt < 1:2917132/150‑5 (MQ=255) ggATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGCttttcttt < 2:3908762/150‑5 (MQ=255) ggATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAAGGCCCCGCAAATGCGGGGCttttcttt < 2:4817100/150‑5 (MQ=255) cgcgTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacatcac < 2:1278917/150‑1 (MQ=255) gcgTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacatcaca > 1:574690/1‑150 (MQ=255) aCTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCGCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTGTTCACATCACAGGTg > 2:839876/1‑150 (MQ=255) cTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGTCCTTTTCACATCCCCGGTgg < 2:2979418/150‑1 (MQ=255) ttCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGt > 1:2259187/1‑150 (MQ=255) ttCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGt > 1:2866838/1‑150 (MQ=255) gAATTAGGGATGCTTCGGCGACGGCATGTAGCGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGa < 1:265919/150‑1 (MQ=255) gAAGTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAT‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGa > 2:4611171/1‑150 (MQ=255) aaTTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAg < 1:3693913/150‑1 (MQ=255) tAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGaa > 1:869191/1‑150 (MQ=255) ggATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTtcacatcac > 2:2436100/1‑130 (MQ=255) aTGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCgg < 1:2447017/150‑1 (MQ=255) ttCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAg > 1:2038257/1‑150 (MQ=255) cGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCt > 1:5003036/1‑150 (MQ=255) ggCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTg > 1:3688551/1‑150 (MQ=255) gACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGa < 1:1410629/150‑1 (MQ=255) gTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACa > 2:2128383/1‑150 (MQ=255) tAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGAtt > 2:1948247/1‑143 (MQ=255) tAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGAtt < 1:1948247/143‑1 (MQ=255) agagGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGt > 2:3895884/1‑150 (MQ=255) agGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAGA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgc > 1:774060/1‑150 (MQ=255) gggCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgcg > 1:1666921/1‑150 (MQ=255) ggCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTTCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgcgc < 2:4174007/150‑1 (MQ=255) ggCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgcgc < 1:4260504/150‑1 (MQ=255) ggCACTGGAAAAGCAGTGCGAGGCAGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTgcgc > 1:1467990/1‑150 (MQ=255) cACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCa > 2:4515845/1‑150 (MQ=255) cACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCa > 2:1180610/1‑150 (MQ=255) aCTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCaa > 2:4641805/1‑150 (MQ=255) aCTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATGTGGACAGTGCGCCaa > 2:3280868/1‑150 (MQ=255) ggAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCt > 1:3515940/1‑150 (MQ=255) aaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtggt < 2:5310546/150‑1 (MQ=255) aaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtggt < 2:2469046/150‑1 (MQ=255) aaGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTtggt < 1:685925/150‑1 (MQ=255) gTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCtt < 1:1067170/150‑1 (MQ=255) tGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTc > 2:4749055/1‑150 (MQ=255) cGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGa > 2:1902746/1‑150 (MQ=255) cGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGa > 2:1903143/1‑150 (MQ=255) gCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGAttt > 2:3792511/1‑117 (MQ=255) gCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGAttt < 1:3792511/117‑1 (MQ=255) gCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGtt > 1:3408927/1‑150 (MQ=255) tAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCt > 1:1502997/1‑150 (MQ=255) aaCACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCtt > 1:669388/1‑150 (MQ=255) acTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGaa > 1:5185227/1‑150 (MQ=255) cTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAAc < 1:2040325/150‑1 (MQ=255) ttGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACa > 1:5150904/1‑150 (MQ=255) gCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCCCAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGc < 1:910826/150‑1 (MQ=255) gCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGc < 2:4194273/150‑1 (MQ=255) ttttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCAt > 2:1936468/1‑150 (MQ=255) ttttCTGCGTCTAGTGCTCTGAAAAAGAACA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCa < 2:3148384/150‑1 (MQ=255) ttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCa < 2:2866838/150‑1 (MQ=255) ttttCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCa < 2:2414298/150‑1 (MQ=255) cTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGt > 2:2150199/1‑150 (MQ=255) tGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTc > 2:4115721/1‑150 (MQ=255) tGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTc < 2:507322/150‑1 (MQ=255) cTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGAt < 2:5113132/150‑1 (MQ=255) tAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATa > 1:5332783/1‑150 (MQ=255) tAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATa > 2:1433623/1‑150 (MQ=255) gTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATAcc > 2:668551/1‑150 (MQ=255) ctctGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGa > 1:3498362/1‑125 (MQ=255) ctctGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGa < 2:3498362/125‑1 (MQ=255) tctGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGc > 1:3221452/1‑150 (MQ=255) ctGAAAAAGTAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGATCAGCATCAGCGTCGGGATACCACGca > 2:1319496/1‑150 (MQ=255) aaaaaGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGaa < 2:2709589/121‑1 (MQ=255) aaaaaGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGaa > 1:2709589/1‑121 (MQ=255) aaaaaGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCacac > 2:152706/1‑150 (MQ=255) aaaaaGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCacac > 1:634728/1‑150 (MQ=255) aaaagaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACAcc > 2:259963/1‑150 (MQ=255) aaaagaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACAcc < 1:1978317/150‑1 (MQ=255) agaaaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTg < 1:5531/150‑1 (MQ=255) aaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCtt < 1:4758742/150‑1 (MQ=255) aaa‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCtt < 2:5387555/150‑1 (MQ=255) aaggCCCCGCAAATGCGGGG‑CTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTg > 2:2021570/4‑150 (MQ=255) a‑gCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTgg > 1:4154890/1‑150 (MQ=255) ccccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGcc > 2:4553612/1‑150 (MQ=255) ccccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGcc > 2:5040127/1‑150 (MQ=255) ccccGCATTTGCGGGGCCATTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGcc < 2:3926554/150‑1 (MQ=255) cccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCg < 2:3688551/150‑1 (MQ=255) ccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgg > 2:1283578/1‑150 (MQ=255) ccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgg > 1:4651128/1‑150 (MQ=255) ccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgg > 1:4388810/1‑150 (MQ=255) ccGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgg > 1:1076678/1‑150 (MQ=255) gCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCgggg > 1:4768055/1‑150 (MQ=255) aTTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCGGGGtt < 2:61041/150‑1 (MQ=255) | CGCCGCTGGATGGCGACAGGATCGCGTACTGATTCGAATTAGGGATGCTTCGGCGACGGCATGTAGAGGGCACTGGAAAAGCAGTGCGAGGCCGAATGTAACACTTGCTTTTTTCTGCGTCTAGTGCTCTGAAAAAGAAAA‑GCCCCGCATTTGCGGGGCCTTTTCACATCACAGGTGGGCGTCGAGGAATGCGGCCAGCTGCGATTTGGACAGTGCGCCAACCTTGGTGGCTTCGACGTTGCCGTTCTTGAACAGCATCAGCGTCGGGATACCACGCACACCGTGCTTGGCCGGGGTT > NC_002947/5950511‑5950808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |