| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,034,767 | C→A | 8.8% | intergenic (+53/+83) | dppA‑IV → / ← PP_5284 | dipeptide transport protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,034,767 | 0 | C | A | 8.8% | 346.7 / 13.0 | 113 | intergenic (+53/+83) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (39/62); new base A (6/5); total (46/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTG > NC_002947/6034618‑6034912 | ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAAACCCCACCTAAAGGGGTAGCGCCAccc > 1:253842/1‑150 (MQ=255) cGACGGCGGCGACCTTGCTGCGCCAATGAGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCt < 1:808377/150‑1 (MQ=255) cGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCt < 1:808408/150‑1 (MQ=255) gACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTg > 2:1709489/1‑150 (MQ=255) aCGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTgg > 2:1039399/1‑150 (MQ=255) ggcgACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAATCCCGCTCCTACAGGGGTAGCGCCAGGCGGGGA‑G‑tt > 2:5141745/1‑150 (MQ=255) ggcgACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑tt > 1:489440/1‑150 (MQ=255) gACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGAc < 2:919022/150‑1 (MQ=255) gACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGAc > 2:382216/1‑150 (MQ=255) gACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGAc < 2:2658325/150‑1 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTa < 1:1499214/150‑1 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTa < 1:5170446/150‑1 (MQ=255) tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAc < 1:4082315/150‑1 (MQ=255) tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAc < 1:4504380/150‑1 (MQ=255) gctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAcc > 1:3475941/1‑150 (MQ=255) gctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCACCAACAGGGGAAGAGCCAGCCTGGCA‑G‑TTTAAGCTAcc > 1:2209814/1‑150 (MQ=39) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 2:2473966/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 2:3475941/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 1:1514963/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 1:1514966/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 1:339707/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 1:339405/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTAccc < 1:339411/150‑1 (MQ=255) gcgcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCt < 2:5330438/150‑1 (MQ=255) gcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGt < 1:468119/150‑1 (MQ=255) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTa < 2:3231708/150‑1 (MQ=25) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCA‑GACTGGCGCTACCCCTGTa < 2:5279961/150‑1 (MQ=25) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTa < 2:489440/150‑1 (MQ=255) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTa < 1:1992552/150‑1 (MQ=255) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTa < 1:3534444/150‑1 (MQ=255) ccAAGGCGTCGAGGGGGACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCGTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTa < 2:3854067/150‑1 (MQ=25) cAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAg < 1:2034097/150‑1 (MQ=21) ggCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCGTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAg < 2:3958820/150‑1 (MQ=255) cGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCg < 2:2266009/150‑1 (MQ=255) gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCgg < 2:2405907/150‑1 (MQ=255) gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCgg < 1:3318141/150‑1 (MQ=255) tCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCggg < 1:4384904/150‑1 (MQ=255) tCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCggg < 1:4384868/150‑1 (MQ=255) tCGAGGGGGCCCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTTAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCGGTAGGAGCggg < 2:3330136/150‑1 (MQ=255) aCCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCcgc < 2:4786491/150‑1 (MQ=255) ccAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCGCTTCGCGGGTAACCCCGCTCCTACCGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCcgcg < 2:4807240/150‑1 (MQ=255) ggTGAGCCCGTTCGGGCGGCTGTATTTCCGCATGGTGACGGTGACCACGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCT‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa < 1:774942/150‑1 (MQ=38) tGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaagag < 2:2623222/150‑4 (MQ=255) cgCCGGTTGGGGCGGCTGGTTTTCAGCACGGTGACGGTGACCACGTAAGCCTGTACCGGCCTCTTCGCGGGTAACCCCGCTCCTACCGGGGTAGCGCCAGCCGGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGc < 2:1219093/149‑1 (MQ=37) cGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGACCTCTTCGCGGGTTAAACCCCGCCAACAGGGGTAGCGCCCCCCGGGGC‑G‑GTGTCCCGACCCCCGGAGGGGCGGGGGTTCCCCCGCAACGGccccg > 1:4159112/1‑148 (MQ=255) cGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTTAAAACCCGCCGAAAGGGGGAGCGCCCCCCGGGCC‑G‑GTGTCGCGACCCCGGGGTGAGGGGGGTTAACCCCGCAAGGGCCCGGAcag > 1:4133241/1‑148 (MQ=255) cTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCCGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑ATGACGCAACCCCAGTAGGAGCCGGGTTACCCGCCACAGGGCCCCTACTGAcccaaa > 2:3106981/1‑147 (MQ=37) tGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGa > 2:4881579/1‑96 (MQ=255) tGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGa < 1:4881579/96‑1 (MQ=255) tGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGt > 1:4447045/1‑108 (MQ=255) ggATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATaa < 2:3229658/150‑1 (MQ=255) cAGCACGGTGACGGTGACCACGTACGCCTGTACCGGCCTCTTCGCGGGTAAACCGGCTCCTACTGGGGTAGCGCCAGCCTGGCT‑G‑TTGACGCTACCCCTATAGGAGCGGGTTTACCCGCGAAAGGTCCCGTACTGACCCTATAAGGctct < 2:1708689/150‑1 (MQ=38) cAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCGACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCCTACTGACCCGATAAGGctcg > 2:2085323/1‑149 (MQ=255) cAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAg < 2:3626488/150‑1 (MQ=255) ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACg > 2:4534137/1‑85 (MQ=255) ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACg < 1:4534137/85‑1 (MQ=255) gtgacCATGTAAGCCTTTACCGGCCTGTTCGCGGGTAAACCCGCTCCTACAGGGGTTGCGCCAGCCTGGCT‑G‑TTTACGCTACCCCTGTAGGAGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa < 2:1909373/150‑1 (MQ=38) gacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCAGGAGGGGCGGGTTTACCCGCGAAAGGGCCCGTACAGACCCTATAAGGCGCTCAGTACTCCCTCAGa > 2:4137735/1‑150 (MQ=38) tAAGCCTGTACCGGCCTCTTCGCGGGTAAACCGGCTCCTACCGGGGTAGCGCCAGCCGGGCC‑T‑TTGACGCTACCCGTGTTGGCGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAAt < 2:1381477/150‑1 (MQ=38) acgCCTGTCCGGGCCTCTTGGCGGTAAAACCCGCTCCTACCGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGCGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATc < 1:3725928/148‑1 (MQ=255) cTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCC‑G‑GTGACGCTACCCCGGTAGGAGCGGGGTTACCCGCCCAAGGGCCCCTACTGACCCAATAAGGCTCGCAGTACTCCCGCAGACCACACGCCAcc > 2:1880697/1‑150 (MQ=25) tGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGTTGGGCCAGCGTGGCA‑G‑TTGACGCTACCCGTGTTGGAGGGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAccc < 2:1923213/150‑1 (MQ=38) gTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCa < 2:2565542/150‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCt > 2:5337068/1‑150 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACAGGGGTTGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGa < 2:847594/150‑1 (MQ=255) gcgcgGGTAAACCCGCTCCTCCAGGGGAAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc < 2:4380780/149‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGa > 1:2423361/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc > 2:3448677/1‑150 (MQ=255) tAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACg > 2:4240060/1‑150 (MQ=21) aaCCCGCTCCTACAGGGTTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTTGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGc < 1:4918448/150‑1 (MQ=255) aCCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCt > 1:3036211/1‑150 (MQ=21) cccGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc > 2:4408820/1‑150 (MQ=21) ccGCTCCTACAGGTGTAGCGCCAGCCTGGCT‑G‑TTGACGCTACCCCTGTAGGAGCGGTTTTACCATCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCAGGCTCGACCATCGACAACGGCTcc < 2:4946405/150‑1 (MQ=255) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTAc > 2:1740273/1‑80 (MQ=255) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTAc < 1:1740273/80‑1 (MQ=255) cGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTccc < 1:382216/150‑1 (MQ=255) gCTCCTACAGGGGTCGCGCCTGCCTGGCT‑G‑TTGACGCTACCCCTGTTGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc < 2:4533507/150‑1 (MQ=255) gCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc > 1:3693775/1‑150 (MQ=255) ccTACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATc > 2:2130283/1‑150 (MQ=25) cTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCa > 2:691560/1‑150 (MQ=255) tACAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 1:672595/1‑150 (MQ=25) tACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCGGTACTCCCTCAGACCCCCATCCACCCATGCTCGACCATCGACAACGGCTCCCCCTCAc > 2:624532/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:624649/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:3286122/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:2138673/1‑150 (MQ=255) aCAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAcc > 1:4589418/1‑150 (MQ=255) cAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGTCCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCa > 2:5376947/1‑150 (MQ=25) cAGGGGTAGCGTCA‑ACTGCCAGG‑CTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCa < 2:3036211/150‑1 (MQ=25) aGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 1:3261185/1‑150 (MQ=255) aGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 1:598505/1‑150 (MQ=255) gggTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatg > 1:1771430/1‑150 (MQ=255) gggTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatg > 1:1770935/1‑150 (MQ=255) gTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:2152273/1‑150 (MQ=255) gTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:5227996/1‑150 (MQ=255) gTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:4437206/1‑150 (MQ=255) aGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACACTCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatga < 2:4407430/150‑1 (MQ=255) aGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatga > 2:4195340/1‑150 (MQ=255) gcgcCAGCCTGGCC‑G‑TGCCCCCAACCCCTTTTGGCGCGGGTTAACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:4593697/150‑1 (MQ=255) gcgcCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:405967/150‑1 (MQ=255) ccAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAtgtg < 1:3783312/150‑1 (MQ=255) | CCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑G‑TTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTG > NC_002947/6034618‑6034912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |