BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	6,046,227	C→T	6.7%	V347V (GTG→GTA)	PP_5297 ←	amino acid transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,046,227	0	C	T	6.7%	499.8 / 15.7	165	V347V (GTG→GTA)	PP_5297	amino acid transporter
Reads supporting (aligned to +/- strand): ref base C (67/86); new base T (8/3); total (76/89)
Fisher's exact test for biased strand distribution p-value = 1.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 168 total aligned reads displayed.

CGGCGCAGATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAGGTA  >  NC_002947/6046079‑6046376

cGGCGCAGATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAAGAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCGGCCGTACTGGCCAGCa                                                                                                                                                      >  2:5402040/1‑150 (MQ=255)

cGGCGCAGATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCa                                                                                                                                                      >  1:76816/1‑150 (MQ=255)

   cgcAGATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACgg                                                                                                                                                   <  2:4385878/150‑1 (MQ=255)

       gATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGAt                                                                                                                                               <  2:1453731/150‑1 (MQ=255)

       gATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGGACTGGCCCGCACGGCGAt                                                                                                                                               >  1:2896427/1‑150 (MQ=255)

          ggtggCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGa                                                                                                                                            <  1:1491807/150‑1 (MQ=255)

           gtggCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCAACGTAATAACCCATGGCCACCAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGAc                                                                                                                                           <  1:2088030/150‑1 (MQ=255)

              gCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATc                                                                                                                                        <  2:4889925/150‑1 (MQ=255)

               cATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCa                                                                                                                                       <  1:1742675/150‑1 (MQ=255)

               cATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCa                                                                                                                                       <  2:5010172/150‑1 (MQ=255)

                aTAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGGACTGGCCAGCACGGCGATGGAcctaag                                                                                                                                      >  1:3872741/1‑145 (MQ=255)

                   gcgcGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGAt                                                                                                                                   >  2:2889894/1‑150 (MQ=255)

                           tttGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCCGCACGGCGATGGACATCAGGATCGCCAGCg                                                                                                                           >  1:3264619/1‑150 (MQ=255)

                           tttGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCACCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCg                                                                                                                           >  2:4654282/1‑150 (MQ=255)

                                       ggCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCg                                                                                                               <  1:3603826/150‑1 (MQ=255)

                                        gCAGACACTGGCTAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGGGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCgg                                                                                                              <  1:3816321/150‑1 (MQ=255)

                                            acacTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGggccg                                                                                                          >  1:1713819/1‑150 (MQ=255)

                                            acacTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGGACAGGCCACCACGGCGATGGACAGCAGGATCGCCAGCGGCCCCATGACCCggccc                                                                                                          >  1:673388/1‑149 (MQ=255)

                                               cTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGggccgccc                                                                                                       <  2:4641494/150‑1 (MQ=255)

                                               cTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCAGGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGggccggcc                                                                                                       <  2:3694554/150‑1 (MQ=255)

                                                tGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACa                                                                                                                                          <  1:2384791/114‑1 (MQ=255)

                                                tGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACa                                                                                                                                          >  2:2384791/1‑114 (MQ=255)

                                                 ggCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAg                                                                                                     <  2:274079/150‑1 (MQ=255)

                                                 ggCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAg                                                                                                     >  2:5331400/1‑150 (MQ=255)

                                                  gCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCCCGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCCgg                                                                                                    >  1:2651269/1‑150 (MQ=255)

                                                    gAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTg                                                                                                  <  2:2355891/150‑1 (MQ=255)

                                                     aaCTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTgg                                                                                                 <  1:3564839/150‑1 (MQ=255)

                                                     aaCTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACCGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTgg                                                                                                 <  1:918059/150‑1 (MQ=255)

                                                          cTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCaaa                                                                                            <  1:4363553/150‑1 (MQ=255)

                                                           tGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCACCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAg                                                                                           <  1:4968767/150‑1 (MQ=255)

                                                            gCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGa                                                                                          <  2:2774103/150‑1 (MQ=255)

                                                                tACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGtt                                                                                      >  2:849395/1‑150 (MQ=255)

                                                                 aCCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTCGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTtc                                                                                     <  2:521048/150‑1 (MQ=255)

                                                                   cGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCCAAGACGTtctc                                                                                   >  2:3461233/1‑150 (MQ=255)

                                                                   cGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTtctc                                                                                   >  1:2979584/1‑150 (MQ=255)

                                                                   cGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTtctc                                                                                   >  1:307689/1‑150 (MQ=255)

                                                                     cACCGTAATCACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCt                                                                                 <  1:1358644/150‑1 (MQ=255)

                                                                     cACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCt                                                                                 <  1:4205988/150‑1 (MQ=255)

                                                                     cACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCt                                                                                 >  2:1585608/1‑150 (MQ=255)

                                                                       ccGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGccc                                                                                                                       <  1:3299303/110‑1 (MQ=255)

                                                                       ccGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGccc                                                                                                                       >  2:3299303/1‑110 (MQ=255)

                                                                        cGTAATAACACATGTCCAACTTGGTGCGAGCCGTCGCCTCGAATGTGGACTGCAGCGACGCCGCCGTACTGGCCATCACGGCGTTTGAAATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGAAAAGACGTTCTCCTGGa                                                                              <  1:4154288/150‑1 (MQ=255)

                                                                         gTAATAACCCATGGCCACCAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGAACGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGAt                                                                             <  2:3350504/150‑1 (MQ=255)

                                                                          taataaCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGAAGTTCTCCTGGAt                                                                             <  2:583418/149‑1 (MQ=255)

                                                                          taataaCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGAAGTTCTCCTGGAt                                                                             >  1:583418/1‑149 (MQ=255)

                                                                             taaCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCCAAGACGTTCTCCTGGATgcgc                                                                         >  1:3441466/1‑150 (MQ=255)

                                                                             taaCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATgcgc                                                                         <  2:4836583/150‑1 (MQ=255)

                                                                              aaCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGcgcg                                                                        >  2:1955078/1‑150 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       >  1:2081646/1‑150 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       <  2:2432374/150‑1 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       >  2:1650786/1‑150 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       <  1:4442561/150‑1 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       <  2:4029768/150‑1 (MQ=255)

                                                                               aCCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCgg                                                                       <  1:3398479/150‑1 (MQ=255)

                                                                                 ccATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGgt                                                                     <  2:1663472/150‑1 (MQ=255)

                                                                                   aTGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATgcgc                                                                         <  2:651258/144‑1 (MQ=255)

                                                                                     ggCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGgttgtt                                                                 <  2:81399/150‑1 (MQ=255)

                                                                                     ggCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGgttgtt                                                                 <  2:2425124/150‑1 (MQ=255)

                                                                                       ccAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCa                                                               <  1:3956725/150‑1 (MQ=255)

                                                                                       ccAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCa                                                               <  1:3957092/150‑1 (MQ=255)

                                                                                         aaCAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAgg                                                             <  1:1576429/150‑1 (MQ=255)

                                                                                          cccggggGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCAGGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGc                                                            <  2:4268708/147‑1 (MQ=255)

                                                                                          aCAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGc                                                            <  1:5058497/150‑1 (MQ=255)

                                                                                          aCAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGc                                                            <  2:541998/150‑1 (MQ=255)

                                                                                            cgggTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGccc                                                          <  2:494741/149‑1 (MQ=255)

                                                                                            aGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGccc                                                          <  2:3784506/150‑1 (MQ=255)

                                                                                              ggTGCGCGCCGGCGGCACGGGGGGGGTCTGCAGCGACGCCGCCGTACTGGCCAGGACGGCGATGGACATCAGGATCGCCAGCGGCCCCGTGTCGGGGCCGGCCGGGTGGGCAGGGACGTTCTCCTGGAGGCGCGGGTTGTTCAGGCCCAg                                                        >  2:1441873/1‑150 (MQ=255)

                                                                                                  cgggcCGGCGCCACGTAGGTGTACTGCAGCGACGCCGCCGTACTGGGCAGCTCGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGAccc                                                    <  1:4872766/147‑1 (MQ=255)

                                                                                                           gcCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTg                                           >  2:697673/1‑150 (MQ=255)

                                                                                                             cACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGAt                                         >  1:4167495/1‑150 (MQ=255)

                                                                                                             cACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGAt                                         >  1:4810276/1‑150 (MQ=255)

                                                                                                             cACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGGTTCACTGAt                                         >  1:4167121/1‑150 (MQ=255)

                                                                                                              aCGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATa                                        >  2:1898923/1‑150 (MQ=255)

                                                                                                              aCGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATa                                        >  2:3480031/1‑150 (MQ=255)

                                                                                                              aCGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATa                                        >  2:1787480/1‑150 (MQ=255)

                                                                                                               cGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATAc                                       <  2:1015117/150‑1 (MQ=255)

                                                                                                                   ggTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGc                                   <  2:76816/150‑1 (MQ=255)

                                                                                                                       gACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCCGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAAc                               >  2:2591674/1‑150 (MQ=255)

                                                                                                                         cTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTg                             >  2:4764960/1‑150 (MQ=255)

                                                                                                                          tGCAGCGACGCCGCCGTACTGGCCAGCACCGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTACTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGc                            >  1:4565511/1‑150 (MQ=255)

                                                                                                                           gCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCa                           <  2:109474/150‑1 (MQ=255)

                                                                                                                             aGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAgg                         <  2:3903851/150‑1 (MQ=255)

                                                                                                                                   gccgccGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCg                   >  2:10288/1‑150 (MQ=255)

                                                                                                                                   atcgccgTGCTGGCCAGTACGGCGGTGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCg                   >  1:4676457/3‑150 (MQ=255)

                                                                                                                                   atcgccgTGCTGGCCAGTACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCg                   >  1:4601361/3‑150 (MQ=255)

                                                                                                                                      gccgTGCTGGCCAGTACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATAc                                       <  1:319513/127‑1 (MQ=255)

                                                                                                                                      gccgTGCTGGCCAGTACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATAc                                       >  2:319513/1‑127 (MQ=255)

                                                                                                                                      gccgTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATg                >  1:3604308/1‑150 (MQ=255)

                                                                                                                                         gtgcTGGCCAGTACGGCGGTGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCg             <  2:1814797/147‑1 (MQ=255)

                                                                                                                                         gTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCg             >  1:940321/1‑150 (MQ=255)

                                                                                                                                          tACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCgg            <  2:899794/150‑1 (MQ=255)

                                                                                                                                           aCTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGt           >  1:2405704/1‑150 (MQ=255)

                                                                                                                                            cTGGCCAGTACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTg          <  1:523265/150‑1 (MQ=255)

                                                                                                                                               gCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAAc       >  2:421723/1‑150 (MQ=255)

                                                                                                                                               gCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAAc       >  2:3934414/1‑150 (MQ=255)

                                                                                                                                                ccAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACa      >  1:212970/1‑150 (MQ=255)

                                                                                                                                                 cAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAg     <  1:4654282/150‑1 (MQ=255)

                                                                                                                                                   gCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAGGt   <  1:10288/150‑1 (MQ=255)

                                                                                                                                                   gCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAGGt   <  2:2424618/150‑1 (MQ=255)

                                                                                                                                                    cACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTGTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAGGTa  <  2:4704104/150‑1 (MQ=255)

CGGCGCAGATGGTGGCATAGCGCGGCGTTTGCGAGCGCGGGCAGACACTGGCGAACTTCTGCGGTACCGCACCGTAATAACCCATGGCCAACAGGGTGCGCGCCGGCGCCACGAAGGTGGACTGCAGCGACGCCGCCGTACTGGCCAGCACGGCGATGGACATCAGGATCGCCAGCGGCCCCATGACCGGGCCGGCCAGGTGGGCAAAGACGTTCTCCTGGATGCGCGGGTTGTTCAGGCCCAGACCCGTTTCACTGATACCGGCAAACTGCAGGGTGGCGATGGCGGTGAACAGGTA  >  NC_002947/6046079‑6046376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`