| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,160,962 | T→A | 5.5% | intergenic (+321/+547) | PP_5739 → / ← PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,160,962 | 0 | T | A | 5.5% | 676.4 / 17.2 | 200 | intergenic (+321/+547) | PP_5739/PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Reads supporting (aligned to +/- strand): ref base T (95/94); new base A (4/7); total (99/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 208 total aligned reads displayed.
AAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCGG > NC_002947/6160815‑6161111 | aGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCaa < 1:5035672/150‑1 (MQ=255) ccGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAgg < 2:1454077/150‑1 (MQ=255) cGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAggc < 1:36552/150‑1 (MQ=255) gCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAggcg > 1:4724863/1‑150 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttttta < 2:92377/150‑2 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttttta < 2:5186107/150‑2 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCtttttt > 2:2600882/1‑150 (MQ=255) ccATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCttttttt < 1:3496627/150‑1 (MQ=255) ccATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCttttttt > 1:700416/1‑150 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCtttttttt < 2:1562180/150‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCtttttttt < 1:1469455/150‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCtttttttt > 2:303176/1‑150 (MQ=255) aTTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTg > 2:2305193/1‑150 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGc > 2:5060965/1‑150 (MQ=255) gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCg > 1:485923/1‑150 (MQ=255) cTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCgg > 2:1488799/1‑150 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCg > 1:820837/1‑150 (MQ=255) cGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGt < 2:4639743/150‑1 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATc < 1:5337575/150‑1 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTAGAGTCCTCACCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAAGTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATc < 2:1210054/150‑1 (MQ=255) cTAAATTTGTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATc < 2:4594967/150‑1 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCg > 1:3423360/1‑150 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCg < 2:1872341/150‑1 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCg < 2:1872296/150‑1 (MQ=255) aaTTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGt > 1:1250603/1‑150 (MQ=255) tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCtttttttt < 1:3818321/129‑1 (MQ=255) tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTAc < 2:1491756/150‑1 (MQ=255) gTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACcgtcgt > 2:1318361/1‑150 (MQ=255) gTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtgctgc > 2:4649611/1‑150 (MQ=255) tGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCa < 2:2108976/150‑1 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg > 1:624078/1‑150 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg > 1:754310/1‑150 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg > 1:5066854/1‑150 (MQ=255) ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGc > 2:2741470/1‑150 (MQ=255) aattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCg > 1:2455212/1‑150 (MQ=255) attaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGa > 1:1166992/1‑150 (MQ=255) aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGa > 1:3127891/1‑150 (MQ=255) aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGa < 1:5443196/150‑1 (MQ=255) ttAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATc < 1:4971561/150‑1 (MQ=255) ttAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATc > 2:3342199/1‑150 (MQ=255) ttAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATc > 1:4037843/1‑150 (MQ=255) gCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt < 1:3342199/150‑1 (MQ=255) tctggTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 2:1537433/5‑150 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 1:1920218/150‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 2:112752/150‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa < 1:1071661/150‑1 (MQ=255) atctcTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTATTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAg < 1:1626295/146‑1 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc > 2:5220052/1‑150 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc > 1:2943617/1‑150 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGGCGACGAACGTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGGGTCGGTTTCGTATGGGTACGGTCGTGGTGCGAGTGTCGCGGTACTTGATGAGTGTGAGGagct > 2:2893662/1‑147 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAATATGCCGCCCTCTCAAGGCGGCTTTTTTTTGGCTCGGATTGGTATCGGTACCGTCGTGGTGGCAGTGTCGCCGAACTTGTTCAGTGTGTGGagat > 2:1626295/1‑147 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCa > 2:4508679/1‑150 (MQ=255) atcaagTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGAt < 1:4064580/131‑1 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa > 1:589366/1‑150 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGAGTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa > 2:181515/1‑150 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtgctgc < 1:2220328/108‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtgctgc > 2:2220328/1‑108 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt < 2:3810603/150‑1 (MQ=255) gTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGt < 2:3423360/150‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa > 2:298446/1‑150 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa > 1:3442938/1‑150 (MQ=255) ttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTac < 2:5427938/150‑1 (MQ=255) aCGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCaa < 2:2100927/150‑1 (MQ=255) tCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 2:3233219/1‑118 (MQ=255) cGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAaccac < 1:384010/150‑1 (MQ=255) gCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAaccacc < 1:1329842/150‑1 (MQ=255) cgacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtg > 1:2110991/1‑150 (MQ=255) gacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt > 1:4162306/1‑150 (MQ=255) gacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt < 2:4502883/150‑1 (MQ=255) cgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGa < 2:4061105/150‑1 (MQ=255) ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGa > 1:1700962/1‑93 (MQ=255) ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGa < 2:1700962/93‑1 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTCTCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc > 2:3497894/1‑150 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc < 2:4438947/150‑1 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGCACACTCAACCACCTGTGACTGTTc > 1:1306508/1‑150 (MQ=255) ctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa < 1:3886142/114‑1 (MQ=255) ctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCg < 2:5094879/150‑1 (MQ=255) ctcAATTCGTTGGCTAAAAAGCCGCCCCCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCCGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCg < 2:2366053/150‑1 (MQ=255) tcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGa > 2:807705/1‑96 (MQ=255) cAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 1:1488799/150‑1 (MQ=255) aTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGACTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCt > 2:4933669/1‑150 (MQ=255) gTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTg < 1:303176/150‑1 (MQ=255) gTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCATTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTg < 1:2600882/150‑1 (MQ=255) ttGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTgg > 1:4099756/1‑150 (MQ=255) gCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCaa < 2:4066807/150‑1 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 1:4413838/1‑150 (MQ=255) aaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGa > 2:3875642/1‑128 (MQ=255) aaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCa > 1:2752431/1‑150 (MQ=255) aaaaaGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCa > 2:1915023/1‑150 (MQ=255) aaaaaGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCa > 1:2707930/1‑150 (MQ=255) aaaaGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa > 2:4903538/1‑90 (MQ=255) gccgccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 1:5396753/150‑1 (MQ=255) ccgccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc > 1:100534/1‑139 (MQ=255) ccgccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc < 2:100534/139‑1 (MQ=255) cgccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgt > 2:3294183/1‑150 (MQ=255) gccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTc > 2:4299470/1‑63 (MQ=255) gccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTc < 1:4299470/63‑1 (MQ=255) gccCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 1:5196387/150‑1 (MQ=255) tctcAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACGCAACCACCTGTGACTGTTCGGCCTGTTg < 2:4117661/131‑1 (MQ=255) ctcAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCg > 2:4210465/1‑150 (MQ=255) | AAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCCGG > NC_002947/6160815‑6161111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |